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Volumn 18, Issue 4, 2009, Pages 1017-1025

Human biospecimen research: Experimental protocol and quality control tools

(14)  Betsou, Fotini a   Barnes, Rebecca b   Burke, Thomas c   Coppola, Domenico d   DeSouza, Yvonne e   Eliason, James f   Glazer, Barbara g   Horsfall, David h   Kleeberger, Cynthia i   Lehmann, Sylvain j   Prasad, Anil k   Skubitz, Amy l   Somiari, Stella m   Gunter, Elaine n  


Author keywords

[No Author keywords available]

Indexed keywords

TUMOR MARKER;

EID: 66649124516     PISSN: 10559965     EISSN: None     Source Type: Journal    
DOI: 10.1158/1055-9965.EPI-08-1231     Document Type: Note
Times cited : (104)

References (39)
  • 1
    • 34347402441 scopus 로고    scopus 로고
    • Errors in a stat laboratory: Types and frequencies 10 years later
    • DOI 10.1373/clinchem.2007.088344
    • Carraro P, Plebani M. Errors in a stat laboratory: types and frequencies 10 years later. Clin Chem 2007;53:1338-1342 PubMed doi:10.1373/clinchem.2007. 088344. (Pubitemid 47020991)
    • (2007) Clinical Chemistry , vol.53 , Issue.7 , pp. 1338-1342
    • Carraro, P.1    Plebani, M.2
  • 2
    • 33645757592 scopus 로고    scopus 로고
    • Preanalytical variability: The dark side of the moon in laboratory testing
    • PubMed doi:10.1515/CCLM.2006.073
    • Lippi G, Guidi GC, Mattiuzzi C, Plebani M. Preanalytical variability: the dark side of the moon in laboratory testing. Clin Chem Lab Med 2006;44:358-365 PubMed doi:10.1515/CCLM.2006.073.
    • (2006) Clin Chem Lab Med , vol.44 , pp. 358-365
    • Lippi, G.1    Guidi, G.C.2    Mattiuzzi, C.3    Plebani, M.4
  • 4
    • 33749357212 scopus 로고    scopus 로고
    • Blood collection, shipment, processing, and storage
    • DOI 10.1158/1055-9965.EPI-06-0630
    • Vaught JB. Blood collection, shipment, processing and storage. Cancer Epidemiol Biomarkers Prev 2006;15:1582-4. PubMed doi:10.1158/1055-9965.EPI-06- 0630. (Pubitemid 44497090)
    • (2006) Cancer Epidemiology Biomarkers and Prevention , vol.15 , Issue.9 , pp. 1582-1584
    • Vaught, J.B.1
  • 5
    • 20444450056 scopus 로고    scopus 로고
    • Molecular epidemiology biomarkers - Sample collection and processing considerations
    • DOI 10.1016/j.taap.2004.10.024, PII S0041008X05000864, Molecular Biomakers - 21st Century Tools for 21st Century Problems in Toxicology
    • Holland NT, Pfleger L, Berger E, Ho A, Bastaki M. Molecular epidemiology biomarkers-sample collection and processing considerations. Toxicol Appl Pharmacol 2005;206:261-268 PubMed doi:10.1016/j.taap.2004.10.024. (Pubitemid 40828246)
    • (2005) Toxicology and Applied Pharmacology , vol.206 , Issue.2 , pp. 261-268
    • Holland, N.T.1    Pfleger, L.2    Berger, E.3    Ho, A.4    Bastaki, M.5
  • 6
    • 0030626749 scopus 로고    scopus 로고
    • Sample collection, processing and storage
    • PubMed
    • Landi MT, Caporaso N. Sample collection, processing and storage. IARC Sci Publ 1997;142:223-236 PubMed.
    • (1997) IARC Sci Publ , vol.142 , pp. 223-236
    • Landi, M.T.1    Caporaso, N.2
  • 8
    • 65549089660 scopus 로고    scopus 로고
    • Toward norms for accreditation of biobanks for human health and medical research: Compilation of existing guidelines into an ISO certification/ accreditation norm-compatible format
    • doi:10.1002/qaj.425
    • Betsou F, Luzergues A, Carter A, et al. Toward norms for accreditation of biobanks for human health and medical research: compilation of existing guidelines into an ISO certification/accreditation norm-compatible format. Qual Assur J 2007;11:221-294 doi:10.1002/qaj.425.
    • (2007) Qual Assur J , vol.11 , pp. 221-294
    • Betsou, F.1    Luzergues, A.2    Carter, A.3
  • 9
    • 56049101835 scopus 로고    scopus 로고
    • Soluble CD40 ligand as a biomarker for storage-related preanalytic variations of human serum
    • PubMed doi:10.1016/j.cyto.2008.08.010
    • Lengellé J, Panopoulos E, Betsou F. Soluble CD40 ligand as a biomarker for storage-related preanalytic variations of human serum. Cytokine 2008;44:275-282 PubMed doi:10.1016/j.cyto.2008.08.010.
    • (2008) Cytokine , vol.44 , pp. 275-282
    • Lengellé, J.1    Panopoulos, E.2    Betsou, F.3
  • 10
    • 33845897937 scopus 로고    scopus 로고
    • Search for shortcuts on the critical path to market: US FDA perspectives from the diagnostic side
    • DOI 10.2217/14622416.7.8.1223
    • Gutman S, Hackett J. Search for shortcuts on the critical path to market: US FDA perspective from the diagnostic side. Pharmacogenomics 2006;7:1223-1227 PubMed doi:10.2217/14622416.7.8.1223. (Pubitemid 46024185)
    • (2006) Pharmacogenomics , vol.7 , Issue.8 , pp. 1223-1227
    • Gutman, S.1    Hackett, J.2
  • 11
    • 34047177929 scopus 로고    scopus 로고
    • Biomarker qualification pilot process at the US food and drug administration
    • Goodsaid F, Fruech F. Biomarker qualification pilot process at the US Food and Drug Administration. AAPS J 2007;9:E105-8. PubMed doi:10.1208/ aapsj0901010. (Pubitemid 46523058)
    • (2007) AAPS Journal , vol.9 , Issue.1 , pp. 10
    • Goodsaid, F.1    Frueh, F.2
  • 13
    • 2942735008 scopus 로고    scopus 로고
    • Comparison of different isolation techniques prior gene expression profiling of blood derived cells: Impact on physiological responses, on overall expression and the role of different cell types
    • DOI 10.1038/sj.tpj.6500240
    • Debey S, Schoenbeck U, Hellmich M, et al. Comparison of different isolation techniques prior gene expression profiling of blood derived cells: impact on physiological responses, on overall expression and the role of different cell types. Pharmacogenomics J 2004;4:193-207. PubMed doi:10.1038/sj.tpj.6500240. (Pubitemid 38786558)
    • (2004) Pharmacogenomics Journal , vol.4 , Issue.3 , pp. 193-207
    • Debey, S.1    Schoenbeck, U.2    Hellmich, M.3    Gathof, B.S.4    Pillai, R.5    Zander, T.6    Schultze, J.L.7
  • 14
    • 0029070840 scopus 로고
    • Biokinetics and stability aspects of biomarkers: Recommendations for application in population studies
    • PubMed doi:10.1016/0300-483X(95)03019-C
    • Bernard AM. Biokinetics and stability aspects of biomarkers: recommendations for application in population studies. Toxicology 1995;101:65-71. PubMed doi:10.1016/0300-483X(95)03019-C.
    • (1995) Toxicology , vol.101 , pp. 65-71
    • Bernard, A.M.1
  • 15
    • 0025616126 scopus 로고
    • Epidemiologic issues in the design and use of biologic specimen banks
    • PubMed
    • Winn DM, Reichman ME, Gunter E. Epidemiologic issues in the design and use of biologic specimen banks. Epidemiol Rev 1990;12:56-70. PubMed.
    • (1990) Epidemiol Rev , vol.12 , pp. 56-70
    • Winn, D.M.1    Reichman, M.E.2    Gunter, E.3
  • 17
    • 66649110404 scopus 로고    scopus 로고
    • Recommandations pré-analytiques en protéomique clinique
    • Institut National du Cancer (INCa). Boulogne Billancourt (France): INCa/Société Française de Biologie Clinique;
    • Institut National du Cancer (INCa). Recommandations pré- analytiques en protéomique clinique. Sérum, Prélè vement et Conservation. Boulogne Billancourt (France): INCa/ Société Française de Biologie Clinique; 2008.
    • (2008) Sérum, Prélèvement et Conservation
  • 18
    • 66649109836 scopus 로고    scopus 로고
    • Recommandations pré-analytiques en protéomique clinique
    • Institut National du Cancer (INCa). Boulogne Billancourt (France): INCa/Société Française de Biologie Clinique
    • Institut National du Cancer (INCa). Recommandations pré- analytiques en protéomique clinique. Plasma, Prélèvement et Conservation. Boulogne Billancourt (France): INCa/Société Française de Biologie Clinique; 2008.
    • (2008) Plasma, Prélèvement et Conservation
  • 19
    • 66649099163 scopus 로고    scopus 로고
    • Recommandations pré-analytiques en protéomique clinique
    • Institut National du Cancer (INCa). Boulogne Billancourt (France): INCa/Société Française de Biologie Clinique;
    • Institut National du Cancer (INCa). Recommandations pré- analytiques en protéomique clinique. Urine, Prélèvement et Conservation. Boulogne Billancourt (France): INCa/Société Française de Biologie Clinique; 2008.
    • (2008) Urine, Prélèvement et Conservation
  • 20
    • 66649111752 scopus 로고    scopus 로고
    • Recommandations pré-analytiques en protéomique clinique
    • Institut National du Cancer (INCa). Boulogne Billancourt (France): INCa/Société Française de Biologie Clinique
    • Institut National du Cancer (INCa). Recommandations pré- analytiques en protéomique clinique. LCR, Prélèvement et Conservation. Boulogne Billancourt (France): INCa/Société Française de Biologie Clinique; 2008.
    • (2008) LCR, Prélèvement et Conservation
  • 21
    • 66649087875 scopus 로고    scopus 로고
    • American Society for Biochemistry and Molecular Biology. Bethesda (MD): American Society for Biochemistry and Molecular Biology. Available from
    • American Society for Biochemistry and Molecular Biology. Bethesda (MD): American Society for Biochemistry and Molecular Biology. Guidelines for Preparing Manuscripts Describing Research in Clinical Proteomics; 2008. Available from: http://www.mcponline.org/cpmeeting/ProGuideIntro2.shtml.
    • (2008) Guidelines for Preparing Manuscripts Describing Research in Clinical Proteomics
  • 22
    • 40449117669 scopus 로고    scopus 로고
    • Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)
    • PubMed doi:10.1038/nbt1391
    • Deutsch EW, Ball CA, Berman JJ, et al. Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE). Nat Biotechnol 2008;26:305-312 PubMed doi:10.1038/nbt1391.
    • (2008) Nat Biotechnol , vol.26 , pp. 305-312
    • Deutsch, E.W.1    Ball, C.A.2    Berman, J.J.3
  • 23
    • 0033671464 scopus 로고    scopus 로고
    • Effects of sample handlingon the stability of interleukin 6, tumour necrosis factor-alpha and leptin
    • PubMed doi:10.1006/cyto.2000.0764
    • Flower L, Ahuja RH, Humphries SE, Mohamed-Ali V. Effects of sample handlingon the stability of interleukin 6, tumour necrosis factor-alpha and leptin. Cytokine 2000;12:1712-1716 PubMed doi:10.1006/cyto.2000.0764.
    • (2000) Cytokine , vol.12 , pp. 1712-1716
    • Flower, L.1    Ahuja, R.H.2    Humphries, S.E.3    Mohamed-Ali, V.4
  • 24
    • 33746404835 scopus 로고    scopus 로고
    • A novel fixative improves opportunities of nucleic acids and proteomic analysis in human archive's tissues
    • DOI 10.1097/00019606-200606000-00009, PII 0001960620060600000009
    • Stanta G, Mucelli SP, Petrera F, Bonin S, Bussolati G. A novel fixative improves opportunities of nucleic acids and proteomic analyses in human archive's tissues. Diagn Mol Pathol 2006;15:115-23. PubMed doi:10.1097/00019606- 200606000-200700009 (Pubitemid 44350489)
    • (2006) Diagnostic Molecular Pathology , vol.15 , Issue.2 , pp. 115-123
    • Stanta, G.1    Mucelli, S.P.2    Petrera, F.3    Bonin, S.4    Bussolati, G.5
  • 25
    • 0142106515 scopus 로고    scopus 로고
    • A Tissue Fixative that Protects Macromolecules (DNA, RNA, and Protein) and Histomorphology in Clinical Samples
    • DOI 10.1097/01.LAB.0000090154.55436.D1
    • Vincek V, Nassiri M, Nadji M, Morales AR. A tissue fixative that protects macromolecules (DNA, RNA and protein) and histomorphology in clinical samples. Lab Invest 2003;83:1427-1435 PubMed doi:10.1097/01.LAB.0000090154.55436.D1. (Pubitemid 37267826)
    • (2003) Laboratory Investigation , vol.83 , Issue.10 , pp. 1427-1435
    • Vincek, V.1    Nassiri, M.2    Nadji, M.3    Morales, A.R.4
  • 26
    • 34547645570 scopus 로고    scopus 로고
    • Novel zinc-based fixative for high quality DNA, RNA and protein analysis
    • PubMed doi:10.1093/nar/gkm433
    • Lykidis D, Van Noorden S, ArmstrongA, et al. Novel zinc-based fixative for high quality DNA, RNA and protein analysis. Nucleic Acids Res 2007;35:e85. PubMed doi:10.1093/nar/gkm433.
    • (2007) Nucleic Acids Res , vol.35
    • Lykidis, D.1    Van Noorden, S.2    Armstrong, A.3
  • 27
    • 4544244613 scopus 로고    scopus 로고
    • Research issues and strategies for genomic and proteomic biomarker discovery and validation: A statistical perspective
    • DOI 10.1517/14622416.5.6.709
    • FengZ, Prentice R, Srivastava S. Research issues and strategies for genomic and proteomic biomarker discovery and validation: a statistical perspective. Pharmacogenomics 2004;5:709-719 PubMed doi:10.1517/14622416.5.6. 709. (Pubitemid 39236584)
    • (2004) Pharmacogenomics , vol.5 , Issue.6 , pp. 709-719
    • Feng, Z.1    Prentice, R.2    Srivastava, S.3
  • 28
    • 0028321603 scopus 로고
    • Efficient use of biological banks for biochemical epidemiology: Exploratory hypothesis testing by means of a sequential t-test
    • Kaaks R, van der Tweel I, van Noord PA, Riboli E. Efficient use of biological banks for biochemical epidemiology: exploratory hypothesis testingby means of a sequential t-test. Epidemiology 1994;5:429-38. PubMed doi:10.1097/00001648-199407000-199500009 (Pubitemid 24197058)
    • (1994) Epidemiology , vol.5 , Issue.4 , pp. 429-438
    • Kaaks, R.1    Van Der Tweel, I.2    Van Noord, P.A.H.3    Riboli, E.4
  • 30
    • 0021314976 scopus 로고
    • Linear regression analysis with repeated measurements
    • PubMed doi:10.1016/0021-9681(84)90027-90034
    • Donner A. Linear regression analysis with repeated measurements. J Chronic Dis 1984;37:441-8. PubMed doi:10.1016/0021-9681(84)90027-90034
    • (1984) J Chronic Dis , vol.37 , pp. 441-448
    • Donner, A.1
  • 31
    • 66649121843 scopus 로고    scopus 로고
    • Long-term stability of coagulation variables: Protein S as a biomarker for preanalytical storage-related variations in human plasma
    • Betsou F, Roussel B, Guillaume N, Lefrere JJ. Long-term stability of coagulation variables: protein S as a biomarker for preanalytical storage-related variations in human plasma. Thromb Haemost 2009.
    • (2009) Thromb Haemost
    • Betsou, F.1    Roussel, B.2    Guillaume, N.3    Lefrere, J.J.4
  • 32
    • 35048878642 scopus 로고    scopus 로고
    • Serum biobank certification and the establishment of quality controls for biological fluids: Examples of serum biomarker stability after temperature variation
    • DOI 10.1515/CCLM.2007.160
    • Chaigneau C, Cabioch T, Beaumont K, Betsou F. Serum biobank certification and the establishment of quality controls for biological fluids: examples of serum biomarker stability after temperature variation. Clin Chem Lab Med 2007;45:1390-1395 PubMed doi:10.1515/CCLM.2007.160. (Pubitemid 47557062)
    • (2007) Clinical Chemistry and Laboratory Medicine , vol.45 , Issue.10 , pp. 1390-1395
    • Chaigneau, C.1    Cabioch, T.2    Beaumont, K.3    Betsou, F.4
  • 33
    • 14644426471 scopus 로고    scopus 로고
    • Plasma storage at -80 degrees C does not protect matrix metalloproteinase-9 from degradation
    • DOI 10.1016/j.ab.2004.10.052
    • Rouy D, Ernens I, Jeanty C, Wagner DR. Plasma storage at -80 degrees C does not protect matrix metalloproteinase-9 from degradation. Anal Biochem 2005;338:294-298 PubMed doi:10.1016/j.ab.2004.10.052. (Pubitemid 40312594)
    • (2005) Analytical Biochemistry , vol.338 , Issue.2 , pp. 294-298
    • Rouy, D.1    Ernens, I.2    Jeanty, C.3    Wagner, D.R.4
  • 34
    • 11144310573 scopus 로고    scopus 로고
    • Effects of processing and storage conditions on amyloid beta (1-42) and tau concentrations in cerebrospinal fluid: Implications for use in clinical practice
    • DOI 10.1373/clinchem.2004.039735
    • Schoonenboom NS, Mulder C, Vanderstichele H, et al. Effects of processingand storage conditions on amyloid beta (1-42) and tau concentrations in cerebrospinal fluid: implications for use in clinical practice. Clin Chem 2005;51:189-195 PubMed doi:10.1373/clinchem.2004.039735. (Pubitemid 40024030)
    • (2005) Clinical Chemistry , vol.51 , Issue.1 , pp. 189-195
    • Schoonenboom, N.S.M.1    Mulder, C.2    Vanderstichele, H.3    Van Elk, E.-J.4    Kok, A.5    Van Kamp, G.J.6    Scheltens, P.7    Blankenstein, M.A.8
  • 35
    • 23844538657 scopus 로고    scopus 로고
    • Truncated cystatin C in cerebrospinal fluid: Technical artefact or biological process?
    • PubMed doi:10.1002/pmic.200402039
    • Carrette O, Burkhard PR, Hughes S, Hochstrasser DF, Sanchez JC. Truncated cystatin C in cerebrospinal fluid: Technical artefact or biological process? Proteomics 2005;5:3060-3065 PubMed doi:10.1002/pmic.200402039.
    • (2005) Proteomics , vol.5 , pp. 3060-3065
    • Carrette, O.1    Burkhard, P.R.2    Hughes, S.3    Hochstrasser, D.F.4    Sanchez, J.C.5
  • 36
    • 0026091495 scopus 로고
    • Assessment of antigen damage in immunohistochemistry. The vimentin internal control
    • Battifora H. Assessment of antigen damage in immunohistochemistry. The vimentin internal control. Am J Clin Pathol 1991;96:669-671
    • (1991) Am J Clin Pathol , vol.96 , pp. 669-671
    • Battifora, H.1
  • 37
    • 33947316888 scopus 로고    scopus 로고
    • Glycogen synthase kinase-3 phosphorylates and regulates the stability of p27kip1 protein
    • Surjit M, Lal SK. Glycogen synthase kinase-3 phosphorylates and regulates the stability of P27kip1 protein. Cell Cycle 2007;6:580-588 PubMed. (Pubitemid 46440432)
    • (2007) Cell Cycle , vol.6 , Issue.5 , pp. 580-588
    • Surjit, M.1    Lal, S.K.2
  • 39
    • 41949094892 scopus 로고    scopus 로고
    • Twenty-first century brain banking. Processing brains for research: The Columbia University methods
    • PubMed doi:10.1007/s00401-007-0311-319
    • Vonsattel JP, Del Amaya MP, Keller CE. Twenty-first century brain banking. Processing brains for research: the Columbia University methods. Acta Neuropathol 2008;115:509-32. PubMed doi:10.1007/s00401-007-0311-319
    • (2008) Acta Neuropathol , vol.115 , pp. 509-532
    • Vonsattel, J.P.1    Del Amaya, M.P.2    Keller, C.E.3


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