Individual b2 ion fragmentation profiles combined with AspN digestion improve N-terminal peptide sequencing

Analytical and Bioanalytical Chemistry

Volumn 393, Issue 6-7, 2009, Pages 1587-1591

  Winter, Dominic ^a   Lehmann, Wolf D ^a  

^a GERMAN CANCER RESEARCH CENTER DKFZ   (Germany)

Author keywords

b2 ions; Collision induced dissociation; Peptide fragmentation; Tandem mass spectrometry

Indexed keywords

AMINO ACID SEQUENCE; B2 IONS; COLLISION-INDUCED DISSOCIATION; DIPEPTIDE MOTIFS; ION FRAGMENTATION; ION SERIES; LOW-MASS; N-TERMINAL; NEUTRAL LOSS; PEPTIDE FRAGMENTATION; PEPTIDE SEQUENCES; PEPTIDE SEQUENCING; REFERENCE SET; TANDEM MASS SPECTROMETRY;

AMINES; DISSOCIATION; MASS SPECTROMETERS; MASS SPECTROMETRY; PEPTIDES;

IONS;

ASPARTIC ACID; ION; OLIGOPEPTIDE; PEPTIDE FRAGMENT;

ARTICLE; CHEMISTRY; SEQUENCE ANALYSIS; TANDEM MASS SPECTROMETRY;

ASPARTIC ACID; IONS; OLIGOPEPTIDES; PEPTIDE FRAGMENTS; SEQUENCE ANALYSIS, PROTEIN; TANDEM MASS SPECTROMETRY;

EID: 66149157281     PISSN: 16182642     EISSN: 16182650     Source Type: Journal    
DOI: 10.1007/s00216-009-2652-9     Document Type: Article

References (18)

1. LA Breci DL Tabb JR Yates 3rd VH Wysocki 2003 Anal Chem 75 1963 1971
2. Kinter M, Sherman NE (2000) Protein sequencing and identification using tandem mass spectrometry. Wiley, New York
3. Savitski MM, Fälth M, Fung YM, Adams CM, Zubarev RA (2008) J Am Soc Mass Spectrom 19:1755-1763
4. CW Hung A Schlosser J Wei WD Lehmann 2007 Anal Bioanal Chem 389 1003 1016
5. A Schlosser WD Lehmann 2002 Proteomics 2 524 533
6. Barnett AJ, Rawlings ND, Woessner JF (eds) (2004) In: Handbook of proteolytic enzymes. 2nd edn. Elsevier, London
7. GR Drapeau 1980 J Biol Chem 255 839 840
8. T Tetaz JR Morrison J Andreou NH Fidge 1990 Biochem Int 22 561 566
9. A Schlosser WD Lehmann 2000 J Mass Spectrom 35 1382 1390
10. AG Harrison 2003 J Mass Spectrom 38 174 187
11. M Salek WD Lehmann 2003 J Mass Spectrom 38 1143 1149
12. DB Martin JK Eng AI Nesvizhskii A Gemmill R Aebersold 2005 Anal Chem 77 4870 4882
13. VH Wysocki G Tsaprailis LL Smith LA Breci 2000 J Mass Spectrom 12 1399 1406
14. AG Harrison IG Csizmadia TH Tang 2000 J Am Soc Mass Spectrom 11 427 436
15. YJK Lee YM Lee 2004 Rapid Commun Mass Spectrom 18 2069 2076
16. H Steen M Mann 2001 J Am Soc Mass Spectrom 12 228 232
17. R Kruger CW Hung M Edelson-Averbukh WD Lehmann 2005 Rapid Commun Mass Spectrom 19 1709 1716
18. KM Swiderek MT Davis T Lee 1998 Electrophoresis 19 989 997