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Volumn 74, Issue 8, 2009, Pages 1774-1786

Exploring factors shaping population genetic structure of the freshwater fish sinocyclocheilus grahami (Teleostei, Cyprinidae)

Author keywords

Geographical isolation; MtDNA; Population structure; Sinocyclocheilus grahami

Indexed keywords

FRESH WATER; MITOCHONDRIAL DNA;

EID: 66149097463     PISSN: 00221112     EISSN: 10958649     Source Type: Journal    
DOI: 10.1111/j.1095-8649.2009.02204.x     Document Type: Article
Times cited : (13)

References (44)
  • 2
    • 16344367457 scopus 로고    scopus 로고
    • Old fish in a young lake: Stone loach (Pisces: Barbatula barbatula) populations in Lake Constance are genetically isolated by distance
    • DOI 10.1111/j.1365-294X.2005.02468.x
    • Barluenga, M. & Meyer, A. (2005). Old fish in a young lake: stone loach (Pisces: Barbatula barbatula) populations in Lake Constance are genetically isolated by distance. Molecular Ecology 14, 1229 1239. doi: 10.1111/j.1365-294X.2005.02468.x. (Pubitemid 40466248)
    • (2005) Molecular Ecology , vol.14 , Issue.4 , pp. 1229-1239
    • Barluenga, M.1    Meyer, A.2
  • 3
    • 34247374703 scopus 로고    scopus 로고
    • An empirical test of freshwater vicariance via river capture
    • DOI 10.1111/j.1365-294X.2006.03196.x
    • Burridge, C. P., Craw, D. & Waters, J. M. (2007). An empirical test of freshwater vicariance via river capture. Molecular Ecology 16, 1883 1895. doi: 10.1111/j.1365-294X.2006.03196.x. (Pubitemid 46639977)
    • (2007) Molecular Ecology , vol.16 , Issue.9 , pp. 1883-1895
    • Burridge, C.P.1    Craw, D.2    Waters, J.M.3
  • 4
    • 0000572139 scopus 로고
    • A new fish of genus Sinocyclocheilus from Yunnan with comments on its characteristic adaptation (Cypriniformes: Cyprinidae)
    • in Chinese
    • Chen, Y. R., Yang, J. X. & Zhu, Z. G. (1994). A new fish of genus Sinocyclocheilus from Yunnan with comments on its characteristic adaptation (Cypriniformes: Cyprinidae). Acta Zootaxonomica Sinica 19, 102 107 (in Chinese).
    • (1994) Acta Zootaxonomica Sinica , vol.19 , pp. 102-107
    • Chen, Y.R.1    Yang, J.X.2    Zhu, Z.G.3
  • 5
    • 0002815292 scopus 로고    scopus 로고
    • One new species of blind cavefish from Guangxi with comments on its phylogenetic status (Cypriniformes: Cyprinidae: Barbinae)
    • in Chinese
    • Chen, Y. R., Yang, J. X. & Lan, J. H. (1997). One new species of blind cavefish from Guangxi with comments on its phylogenetic status (Cypriniformes: Cyprinidae: Barbinae). Acta Zootaxonomica Sinica 22, 219 223 (in Chinese).
    • (1997) Acta Zootaxonomica Sinica , vol.22 , pp. 219-223
    • Chen, Y.R.1    Yang, J.X.2    Lan, J.H.3
  • 6
    • 25844433629 scopus 로고    scopus 로고
    • Present status of the indigenous fishes in Dianchi Lake, Yunnan
    • in Chinese
    • Chen, Z. M., Yang, J. X., Su, R. F. & Chen, X. Y. (2001). Present status of the indigenous fishes in Dianchi Lake, Yunnan. Biodiversity Science 9, 407 413 (in Chinese).
    • (2001) Biodiversity Science , vol.9 , pp. 407-413
    • Chen, Z.M.1    Yang, J.X.2    Su, R.F.3    Chen, X.Y.4
  • 8
    • 0033771358 scopus 로고    scopus 로고
    • TCS: A computer program to estimate gene genealogies
    • doi: 10.1046/j.1365-294x.2000.01020.x
    • Clement, M., Posada, D. & Crandall, K. A. (2000). TCS: a computer program to estimate gene genealogies. Molecular Ecology 9, 1657 1659. doi: 10.1046/j.1365-294x.2000.01020.x.
    • (2000) Molecular Ecology , vol.9 , pp. 1657-1659
    • Clement, M.1    Posada, D.2    Crandall, K.A.3
  • 9
    • 0037295761 scopus 로고    scopus 로고
    • The influence of history and contemporary stream hydrology on the evolution of genetic diversity within species: An examination of microsatellite DNA variation in bull trout, Salvelinus confluentus (Pisces: Salmonidae)
    • Costello, A. B., Down, T. E., Pollard, S. M., Pacas, C. J. & Taylor, E. B. (2003). The influence of history and contemporary stream hydrology on the evolution of genetic diversity within species: an examination of microsatellite DNA variation in bull trout, Salvelinus confluentus (Pisces: Salmonidae). Evolution 57, 328 344. doi: 10.1111/j.0014-3820.2003.tb00267.x. (Pubitemid 36333343)
    • (2003) Evolution , vol.57 , Issue.2 , pp. 328-344
    • Costello, A.B.1    Down, T.E.2    Pollard, S.M.3    Pacas, C.J.4    Taylor, E.B.5
  • 10
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond, A. J. & Rambaut, A. (2007). BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology 7, 214.
    • (2007) BMC Evolutionary Biology , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 11
    • 0036021407 scopus 로고    scopus 로고
    • Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data
    • Drummond, A. J., Nicholls, G. K., Rodrigo, A. G. & Solomon, W. (2002). Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data. Genetics 161, 1307 1320.
    • (2002) Genetics , vol.161 , pp. 1307-1320
    • Drummond, A.J.1    Nicholls, G.K.2    Rodrigo, A.G.3    Solomon, W.4
  • 12
    • 33344465800 scopus 로고    scopus 로고
    • Relaxed phylogenetics and dating with confidence
    • DOI 10.1371/journal.pbio.0040088
    • Drummond, A. J., Ho, S. Y. W., Phillips, M. J. & Rambaut, A. (2006). Relaxed phylogenetics and dating with confidence. PLoS Biology 4, e88. (Pubitemid 43748216)
    • (2006) PLoS Biology , vol.4 , Issue.5 , pp. 699-710
    • Drummond, A.J.1    Ho, S.Y.W.2    Phillips, M.J.3    Rambaut, A.4
  • 13
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
    • Excoffier, L., Smouse, P. E. & Quattiro, J. M. (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131, 479 491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattiro, J.M.3
  • 14
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin ver. 3.0: An integrated software package for population genetics data analysis
    • Excoffier, L., Laval, G. & Schneider, S. (2005). Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1, 47 50.
    • (2005) Evolutionary Bioinformatics Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 15
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783 791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 16
    • 0030821992 scopus 로고    scopus 로고
    • Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
    • Fu, Y. X. (1997). Statistical tests of neutrality of mutations against population growth, hitchhiking and back ground selection. Genetics 147, 915 925. (Pubitemid 27418596)
    • (1997) Genetics , vol.147 , Issue.2 , pp. 915-925
    • Fu, Y.-X.1
  • 17
    • 20444427160 scopus 로고    scopus 로고
    • Time dependency of molecular rate estimates and systematic overestimation of recent divergence times
    • DOI 10.1093/molbev/msi145
    • Ho, S. Y. W., Phillips, M. J., Cooper, A. & Drummond, A. J. (2005). Time dependency of molecular rate estimates and systematic overestimation of recent divergence times. Molecular Biology and Evolution 22, 1561 1568. (Pubitemid 40800685)
    • (2005) Molecular Biology and Evolution , vol.22 , Issue.7 , pp. 1561-1568
    • Ho, S.Y.W.1    Phillips, M.J.2    Cooper, A.3    Drummond, A.J.4
  • 18
    • 25444495255 scopus 로고    scopus 로고
    • Isolation by distance, web service
    • DOI 10.1186/1471-2156-6-13
    • Jensen, J., Bohonak, A. & Kelley, S. (2005). Isolation by distance, web service. BMC Genetics 6, 13. (Pubitemid 41363918)
    • (2005) BMC Genetics , vol.6 , pp. 13
    • Jensen, J.L.1    Bohonak, A.J.2    Kelley, S.T.3
  • 19
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefs in Bioinformatics 5, 150 163.
    • (2004) Briefs in Bioinformatics , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 20
    • 0035750891 scopus 로고    scopus 로고
    • The distribution of surviving Sinocyclocheilus grahami and other endemic fishes in Dianchi Lake valley
    • (in Chinese).
    • Li, W. X. (2001). The distribution of surviving Sinocyclocheilus grahami and other endemic fishes in Dianchi Lake valley. Journal of Jishou University (Natural Science Edition) 22, 72 74 (in Chinese).
    • (2001) Journal of Jishou University (Natural Science Edition) , vol.22 , pp. 72-74
    • Li, W.X.1
  • 21
    • 0036554568 scopus 로고    scopus 로고
    • Strategies to protect biological diversity and the evolutionary processes that sustain it
    • DOI 10.1080/10635150252899752
    • Moritz, C. (2002). Strategies to protect biological diversity and the evolutionary processes that sustain it. Systematic Biology 51, 238 254. (Pubitemid 35180707)
    • (2002) Systematic Biology , vol.51 , Issue.2 , pp. 238-254
    • Moritz, C.1
  • 22
    • 41149087620 scopus 로고    scopus 로고
    • Genetic structure of the killifish Aphanius fasciatus, Nardo 1827 (Teleostei, Cyprinodontidae), results of mitochondrial DNA analysis
    • doi: 10.1111/j.1095-8649.2007.01748.x
    • Pappalardo, A. M., Ferrito, V., Messina, A., Guarino, F., Patarnello, T., De Pinto, V. & Tigano, C. (2008). Genetic structure of the killifish Aphanius fasciatus, Nardo 1827 (Teleostei, Cyprinodontidae), results of mitochondrial DNA analysis. Journal of Fish Biology 72, 1154 1173. doi: 10.1111/j.1095-8649.2007.01748.x.
    • (2008) Journal of Fish Biology , vol.72 , pp. 1154-1173
    • Pappalardo, A.M.1    Ferrito, V.2    Messina, A.3    Guarino, F.4    Patarnello, T.5    De Pinto, V.6    Tigano, C.7
  • 23
    • 17644414531 scopus 로고    scopus 로고
    • Nonequilibrium conditions following landscape rearrangement: The relative contribution of past and current hydrological landscapes on the genetic structure of a stream-dwelling fish
    • DOI 10.1111/j.1365-294X.2005.02500.x
    • Poissant, J., Knight, T. W. & Ferguson, M. M. (2005). Nonequilibrium conditions following landscape rearrangement: the relative contribution of past and current hydrological landscapes on the genetic structure of a stream-dwelling fish. Molecular Ecology 14, 1321 1331. doi: 10.1111/j.1365-294X. 2005.02500.x. (Pubitemid 40554790)
    • (2005) Molecular Ecology , vol.14 , Issue.5 , pp. 1321-1331
    • Poissant, J.1    Knight, T.W.2    Ferguson, M.M.3
  • 24
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada, D. & Crandall, K. D. (1998). Modeltest: testing the model of DNA substitution. Bioinformatics 14, 817 818. (Pubitemid 28552116)
    • (1998) Bioinformatics , vol.14 , Issue.9 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 25
    • 0034752872 scopus 로고    scopus 로고
    • Rapid genetic divergence in postglacial populations of threespine stickleback (Gasterosteus aculeatus): The role of habitat type, drainage and geographical proximity
    • DOI 10.1046/j.0962-1083.2001.01366.x
    • Reusch, T. B. H., Wegner, K. M. & Kalbe, M. (2001). Rapid genetic divergence in postglacial populations of threespine stickleback (Gasterosteus aculeatus): the role of habitat type, drainage and geographic proximity. Molecular Ecology 10, 2435 2445. doi: 10.1046/j.0962-1083.2001.01366.x. (Pubitemid 33023538)
    • (2001) Molecular Ecology , vol.10 , Issue.10 , pp. 2435-2445
    • Reusch, T.B.H.1    Wegner, K.M.2    Kalbe, M.3
  • 26
    • 0026548159 scopus 로고
    • Population growth makes waves in the distribution of pairwise genetic differences
    • Rogers, A. R. & Harpending, H. (1992). Population growth makes waves in the distribution of pairwise genetic differences. Molecular Biology and Evolution 9, 552 569.
    • (1992) Molecular Biology and Evolution , vol.9 , pp. 552-569
    • Rogers, A.R.1    Harpending, H.2
  • 28
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • DOI 10.1093/bioinformatics/btg180
    • Ronquist, F. & Huelsenbeck, J. P. (2003). Mrbayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572 1574. (Pubitemid 37038874)
    • (2003) Bioinformatics , vol.19 , Issue.12 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 29
    • 0002086307 scopus 로고
    • Species conservation and the dilemma of subspecies
    • Ryder, O. A. (1986). Species conservation and the dilemma of subspecies. Trends in Ecology and Evolution 1, 9 10.
    • (1986) Trends in Ecology and Evolution , vol.1 , pp. 9-10
    • Ryder, O.A.1
  • 32
    • 0034761781 scopus 로고    scopus 로고
    • Phylogeography of the spotted sand bass, Paralabrax maculatofasciatus: Divergence of Gulf of California and Pacific Coast populations
    • Stepien, C. A., Rosenblatt, R. H. & Bargmeyer, B. A. (2001). Phylogeography of the spotted sand bass, Paralabrax maculatofasciatus: divergence of Gulf of California and Pacific coast populations. Evolution 55, 1852 1862. doi: 10.1111/j.0014-3820.2001.tb00834.x. (Pubitemid 32984003)
    • (2001) Evolution , vol.55 , Issue.9 , pp. 1852-1862
    • Stepien, C.A.1    Rosenblatt, R.H.2    Bargmeyer, B.A.3
  • 34
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima, F. (1989). Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123, 585 595. (Pubitemid 19274682)
    • (1989) Genetics , vol.123 , Issue.3 , pp. 585-595
    • Tajima, F.1
  • 35
    • 0141613141 scopus 로고    scopus 로고
    • Population subdivision in westslope cutthroat trout (Oncorhynchus clarki lewisi) at the northern periphery of its range: Evolutionary inferences and conservation implications
    • DOI 10.1046/j.1365-294X.2003.01937.x
    • Taylor, E. B., Stamford, M. D. & Baxter, J. S. (2003). Population subdivision in westslope cutthroat trout (Oncorhynchus clarki lewisi) at the northern periphery of its range: evolutionary inferences and conservation implications. Molecular Ecology 12, 2609 2622. doi: 10.1046/j.1365-294X.2003. 01937.x. (Pubitemid 37195899)
    • (2003) Molecular Ecology , vol.12 , Issue.10 , pp. 2609-2622
    • Taylor, E.B.1    Stamford, M.D.2    Baxter, J.S.3
  • 36
    • 0026662698 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data III. Cladogram estimation
    • Templeton, A. R., Crandall, K. A. & Sing, C. F. (1992). A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data III. Cladogram estimation. Genetics 132, 619 633.
    • (1992) Genetics , vol.132 , pp. 619-633
    • Templeton, A.R.1    Crandall, K.A.2    Sing, C.F.3
  • 37
    • 34347344005 scopus 로고    scopus 로고
    • Life-history and habitat features influence the within-river genetic structure of Atlantic salmon
    • DOI 10.1111/j.1365-294X.2007.03329.x
    • Vaha, J. P., Erkinaro, J., Niemela, E. & Primmer, C. R. (2007). Life-history and habitat features influence the within-river genetic structure of Atlantic salmon. Molecular Ecology 16, 2638 2654. doi: 10.1111/j.1365-294X. 2007.03329.x. (Pubitemid 47012148)
    • (2007) Molecular Ecology , vol.16 , Issue.13 , pp. 2638-2654
    • Vaha, J.-P.1    Erkinaro, J.2    Niemela, E.3    Primmer, C.R.4
  • 38
    • 19444364429 scopus 로고    scopus 로고
    • The origin and adaptive evolution of the genus Sinocyclocheilus
    • in Chinese
    • Wang, D. Z. & Chen, Y. Y. (2000). The origin and adaptive evolution of the genus Sinocyclocheilus. Acta Hydrobiologica Sinica 24, 630 634 (in Chinese).
    • (2000) Acta Hydrobiologica Sinica , vol.24 , pp. 630-634
    • Wang, D.Z.1    Chen, Y.Y.2
  • 39
    • 19444375510 scopus 로고    scopus 로고
    • Molecular phylogeny of Sinocyclocheilus (Cypriniformes: Cyprinidae) inferred from mitochondrial DNA sequences
    • DOI 10.1016/j.ympev.2004.12.007, PII S105579030400394X
    • Xiao, H., Chen, S. Y., Liu, Z. M., Zhang, R. D., Li, W. X., Zan, R. G. & Zhang, Y. P. (2005). Molecular phylogeny of Sinocyclocheilus (Cypriniformes: Cyprinidae) inferred from mitochondrial DNA sequences. Molecular Phylogenetics and Evolution 36, 67 77. (Pubitemid 40722092)
    • (2005) Molecular Phylogenetics and Evolution , vol.36 , Issue.1 , pp. 67-77
    • Xiao, H.1    Chen, S.-Y.2    Liu, Z.-M.3    Zhang, R.-D.4    Li, W.-X.5    Zan, R.-G.6    Zhang, Y.-P.7
  • 42
    • 66149100784 scopus 로고    scopus 로고
    • Past research and future development on endemic Chinese cavefish of the genus Sinocyclocheilus (Cypriniformes, Cyprinidae)
    • in Chinese
    • Zhao, Y. H. & Zhang, C. G. (2006). Past research and future development on endemic Chinese cavefish of the genus Sinocyclocheilus (Cypriniformes, Cyprinidae). Acta Zootaxonomica Sinica 31, 769 777 (in Chinese).
    • (2006) Acta Zootaxonomica Sinica , vol.31 , pp. 769-777
    • Zhao, Y.H.1    Zhang, C.G.2


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