Correction to: Mitochondrial phylogeography of baboons (Papio spp.) - Indication for introgressive hybridization? (BMC Evolutionary Biology (2009) 9 (83) DOI: 10.1186/1471-2148-9-83);Mitochondrial phylogeography of baboons (Papio spp.) Indication for introgressive hybridization?

BMC Evolutionary Biology

Volumn 9, Issue 1, 2009, Pages

  Zinner, Dietmar ^a   Groeneveld, Linn F ^a,b   Keller, Christina ^a,c   Roos, Christian ^a  

^a GERMAN PRIMATE CENTER   (Germany)

^b FEDERAL RESEARCH INSTITUTE FOR ANIMAL HEALTH   (Germany)

^c Göttinger Zentrum für Biodiversitätsforschung und Kologie   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME B; MITOCHONDRIAL DNA;

AFRICA; AGE DETERMINATION; ANIMAL EXPERIMENT; ARTICLE; BABOON; BIOME; CONTROLLED STUDY; GEOGRAPHIC DISTRIBUTION; GLACIAL PERIOD; HAPLOTYPE; HYBRIDIZATION; MITOCHONDRION; MOLECULAR PHYLOGENY; MORPHOLOGY; NONHUMAN; OLIVE; PHYLOGENETIC TREE; PHYLOGEOGRAPHY; PLEISTOCENE; POPULATION; SAVANNA; ANIMAL; GENETICS; GEOGRAPHY; MOLECULAR GENETICS; PAPIO; PHYLOGENY; SPECIES DIFFERENCE; TIME;

MYA; PAPIO; PAPIO ANUBIS; PAPIO CYNOCEPHALUS; PAPIO HAMADRYAS; PAPIO URSINUS;

AFRICA; ANIMALS; CYTOCHROMES B; DNA, MITOCHONDRIAL; GEOGRAPHY; HYBRIDIZATION, GENETIC; MOLECULAR SEQUENCE DATA; PAPIO; PHYLOGENY; SPECIES SPECIFICITY; TIME FACTORS;

EID: 65649154455     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/s12862-019-1537-6     Document Type: Erratum

References (107)

1. Extensive nuclear DNA sequence diversity among chimpanzees. H Kaessmann V Wiebe S Pääbo, Science 1999 286 1159 1162 10550054 (Pubitemid 129515810)
2. Species concepts, reticulation, and human evolution. TW Holliday, Curr Anthropol 2003 44 653 660
3. The mosaic that is our genome. S Pääbo, Nature 2003 421 409 412 12540910 (Pubitemid 36157943)
4. Evidence that the adaptive allele of the brain size gene microcephalin introgressed into Homo sapiens from an archaic Homo lineage. PD Evans N Mekel-Bobrov EJ Vallender RR Hudson BT Lahn, Proc Natl Acad Sci USA 2006 103 18178 18183 17090677
5. Genetic evidence for complex speciation of humans and chimpanzees. N Patterson DJ Richter S Gnerre ES Lander D Reich, Nature 2006 441 1103 1108 16710306 (Pubitemid 43990725)
6. Natural hybridization in primates: One evolutionary mechanism. ML Arnold A Meyer, Zoology 2006 109 261 276 16945512 (Pubitemid 44572717)
7. ML Arnold, Reticulate Evolution and Humans. Origins and Ecology Oxford: Oxford University Press 2008
8. A proper study for mankind: Analogies from the Papionin monkeys and their implications for human evolution. CJ Jolly, Am J Phys Anthropol 2001 Suppl 33 177 204 11786995 (Pubitemid 33614096)
9. Archaic human admixture: A view from the genome. D Garrigan SB Kingan, Curr Anthropol 2007 48 895 902
10. Mitochondrial phylogeny and systematics of baboons (Papio). TK Newman CJ Jolly J Rogers, Am J Phys Anthropol 2004 124 17 27 15085544 (Pubitemid 39030311)
11. J Kingdon, The Kingdon Field Guide to African Mammals London: Academic Press 1997
12. Current problems with Papio taxonomies. E Sarmiento, Afr Primates 1998 3 1997 48
13. The social and ecological flexibility of Guinea baboons: implications for Guinea baboons social organization and male strategies. A Galat-Luong G Galat S Hagell, Reproduction and Fitness in Baboons. Behavioral, Ecological, and Life History Perspectives New York: Springer, Swedell L, Leigh SR, 2006 105 121
14. Behavioral variation and reproductive success of male baboons (Papio anubis × Papio hamadryas) in a hybrid social group. T Bergman JE Phillips-Conroy CJ Jolly, Am J Primatol 2008 70 136 147 17724672
15. Phylogenetics and Population Genetics of Central African Baboons. A Burrell, PhD thesis New York University, Department of Anthropology 2008
16. Genetic evidence reveals temporal change in hybridization patterns in a wild baboon population. J Tung MJE Charpentier DA Garfield J Altmann SC Alberts, Mol Ecol 2008 17 1998 2011 18363664
17. On hybridization between Theropithecus gelada and Papio anubis in the wild. RIM Dunbar EP Dunbar, J Hum Evol 1974 3 187 192
18. Intergeneric hybrid baboons. CJ Jolly T Woolley-Barker Beyene Shimelis TR Disotell JE Phillips-Conroy, Int J Primatol 1997 18 597 627 (Pubitemid 27415923)
19. Theropithecus fossils from Africa and India and the taxonomy of the genus. E Delson, Theropithecus: The Rise and Fall of a Primate Genus Cambridge: Cambridge University Press, Jablonski NG, 1993 157 189
20. NG Jablonski (ed), Theropithecus: The Rise and Fall of a Primate Genus Cambridge: Cambridge University Press 1993
21. WCO Hill, Primates: Comparative Anatomy and Taxonomy VIII Cynopithecinae: Papio, Mandrillus, Theropithecus Edinburgh: Edinburgh University Press 1970
22. Species, subspecies and baboon systematics. CJ Jolly, Species, Species Concepts, and Primate Evolution New York: Plenum Press, Kimbel WH, Martin LB, 1993 67 107
23. Cranial allometry, phylogeography, and systematics of large-bodied papionins (Primates: Cercopithecinae) inferred from geometric morphometric analysis of landmark data. SR Frost LF Marcus FL Bookstein DP Reddy E Delson, Anat Rec A Discov Mol Cell Evol Biol 2003 275 2 1048 1072 14613306 (Pubitemid 37486783)
24. CP Groves, Primate Taxonomy Washington DC: Smithsonian Institution Press 2001
25. Assessment of the diversity of African primates. P Grubb TM Butynski JF Oates SK Bearder TR Disotell CP Groves TT Struhsaker, Int J Primatol 2003 24 1301 1357 (Pubitemid 38042996)
26. Baboons, mandrills, and mangabeys: Afro-Papionin socioecology in a phylogenetic perspective. CJ Jolly, Primates in Perspective New York: Oxford University Press, Campbell CJ, Fuentes A, MacKinnon KC, Panger M, Bearder SK, 2007 240 251
27. Operational criteria for deliminating species. JW Sites JC Marshall, Annu Rev Ecol Evol Syst 2004 35 199 227
28. Ancient co-speciation of simian foamy viruses and primates. WM Switzer M Salemi V Shanmugam F Gao M Cong C Kuiken V Bhullar BE Beer D Vallet A Gautier-Hion Z Tooze F Villinger EC Holmes W Heneine, Nature 2005 434 376 380 15772660 (Pubitemid 40469179)
29. A composite estimate of primate phylogeny. A Purvis, Philos Trans R Soc Lond B Biol Sci 1995 348 405 421 7480112
30. H Kummer, Social Organization of Hamadryas Baboons. A Field Study Chicago: The University of Chicago Press 1968
31. Cercopithecines in multimale groups: genetic diversity and population structure. DJ Melnick MC Pearl, Primate Societies Chicago: The University of Chicago Press, Smuts BB, Cheney DL, Seyfarth RM, Wrangham RW, Struhsaker TT, 1987 121 134
32. The southern African origin of the genus Papio [abstract]. JK McKee, S Afr J Med 1992 82 193
33. Cercopithecid fossils from the later Pleistocene of Taung, South Africa [abstract]. DC Broadfield E Delson S Atsalis, Am J Phys Anthropol 1994 18 Suppl 59 60
34. Biogeography, dietary specialization, and the diversification of African plio-pleistocene monkeys. B Benefit, African Biogeography, Climate Change, & Human Evolution Oxford: Oxford University Press, Bromage TG, Schrenk F, 1999 172 188
35. Mitochondrial DNA variation in Eritrean hamadryas baboons (Papio hamadryas hamadryas): Lifehistory influences population genetic structure. A Hapke D Zinner H Zischler, Behav Ecol Sociobiol 2001 50 483 492 (Pubitemid 33072697)
36. Mitochondrial evidence for the origin of hamadryas baboons. DE Wildman TJ Bergman A al-Aghbari KN Sterner T Newman JE Phillips-Conroy CJ Jolly TR Disotell, Mol Phylogenet Evol 2004 32 287 296 15186814 (Pubitemid 38851946)
37. Mitochondrial DNA sequences of primates: Tempo and mode of evolution. WM Brown EM Prager A Wang AC Wilson, J Mol Evol 1982 18 225 239 6284948
38. Increased taxon sampling greatly reduces phylogenetic error. DJ Zwickl DM Hillis, Syst Biol 2002 51 588 598 12228001 (Pubitemid 35180690)
39. A molecular phylogeny of the New World Orioles (lcterus): the importance of dense taxon sampling. KE Omland SM Lanyon SI Fritz, Mol Phylogenet Evol 1999 12 224 239 10381325 (Pubitemid 129499304)
40. Population genetical study of natural hybridisation between Papio anubis und Papio hamadryas. T Shotake, Primates 1981 22 285 308
41. Species-level paraphyly and polyphyly: frequency, causes, and consequences, with insights from animal mitochondrial DNA. D Funk K Omland, Ann Rev Ecol Evol Syst 2003 34 397 423 (Pubitemid 38171425)
42. MtDNA diversity in rhesus monkeys reveals overestimates of divergence time and paraphyly with neighboring species. DJ Melnick GA Hoelzer R Absher MV Ashley, Mol Biol Evol 1993 10 282 295 8487631 (Pubitemid 23103002)
43. Comparison of Y chromosome and mtDNA phylogenies leads to unique inferences of macaque evolutionary history. AJ Tosi JC Morales DJ Melnick, Mol Phylogenet Evol 2000 17 133 144 11083929
44. Phylogenetic position of the langur genera Semnopithecus and Trachypithecus among Asian colobines, and genus affiliations of their species groups. M Osterholz L Walter C Roos, BMC Evol Biol 2008 8 58 18298809
45. Principles of genealogical concordance in species concepts and biological taxonomy. J Avise R Ball, Oxford Surv Evol Biol 1990 7 45 67
46. Phylogeny and phylogeography of the Liolaemus darwinii complex (Squamata: Liolaemidae): evidence for introgression and incomplete lineage sorting. M Morando LJ Avila J Baker JW Sites Jr, Evolution 2004 58 842 859 15154559 (Pubitemid 38583872)
47. J Avise, Molecular Markers, Natural History, and Evolution Sunderland, MA: Sinauer Associates 2004
48. Is the New Primate Genus Rungwecebus a Baboon? D Zinner ML Arnold C Roos, PLoS ONE 2009 4 e4859 19295908
49. The phylogenetic position of "Papio ruhei " a unique baboon taxon from Somalia? D Zinner R Kraft C Roos, Zool Garten NF 2008 77 303 311
50. Immigration and hybridization patterns of yellow and anubis baboons in and around Amboseli, Kenya. SC Alberts J Altmann, Am J Primatol 2001 53 139 154 11283975 (Pubitemid 32337478)
51. Genetic evidence for long-term population decline in a savannah-dwelling primate: Inferences from a hierarchical Bayesian model. JF Storz MA Beaumont SC Alberts, Mol Biol Evol 2002 19 1981 1990 12411607 (Pubitemid 35388121)
52. Blood protein variations in baboons. I. Gene exchange and genetic distance between Papio anubis, Papio hamadryas and their hybrid. T Shotake K Nozawa Y Tanabe, Japanese J Genetics 1977 52 223 237 (Pubitemid 8165239)
53. Dispersal and philopatry. AE Pusey C Packer, Primate Societies Chicago: The University of Chicago Press, Smuts BB, Cheney DL, Seyfarth RM, Wrangham RW, Struhsaker TT, 1987 250 266
54. Evolution in African plio-pleistocene mammalian fauna: Correlation and causation. A Turner, African Biogeography, Climate Change, & Human Evolution Oxford: Oxford University Press, Bromage TG, Schrenk F, 1999 76 87
55. The genetic legacy of the Quaternary ice ages. G Hewitt, Nature 2000 405 907 913 10879524 (Pubitemid 30435039)
56. African climate change and faunal evolution during the Pliocene-Pleistocene. PB deMenocal, Earth Planet Sc Lett 2004 220 3 24 (Pubitemid 38423476)
57. AC Hamilton, Environmental History of East Africa: A Study of the Quaternary London: Academic Press 1982
58. History of climate and forests in tropical Africa during the last 8 million years. AC Hamilton D Taylor, Climatic Change 1991 19 65 78 (Pubitemid 23371930)
59. Aspects of late Quaternary vegetational changes in West Africa. MA Sowunmi, J Biogeogr 1981 8 457 474 (Pubitemid 12256218)
60. The quaternary history of African forests: its relevance to conservation. AC Hamilton, Afr J Ecol 1981 19 1 6
61. Guenon evolution and forest history. AC Hamilton, A Primate Radiation. Evolutionary Biology of the African Guenons Cambridge: Cambridge University Press, Gautier-Hion A, Bourliere F, Gautier JP, Kingdon J, 1988 13 34
62. Refuges and dispersal in the speciation of African forest mammals. P Grubb, Biological Diversification in the Tropics New York: Columbia University Press, Prance GT, 1982 537 553
63. Forest monkeys and Pleistocene refugia: a phylogeographic window onto the disjunct distribution of the Chlorocebus lhoesti species group. AJ Tosi, Zool J Linn Soc-Lond 2008 154 408 418
64. Habitat theory in relation to the evolution in African neogene biota and hominids. E Vrba, African Biogeography, Climate Change, & Human Evolution Oxford: Oxford University Press, Bromage TG, Schrenk F, 1999 19 34
65. Phylogeography of three closely related African bovids (tribe Alcelaphini). P Arctander C Johansen MA Coutellec-Vreto, Mol Biol Evol 1999 16 1724 1739 10605114
66. Environmental change and rates of evolution: The phylogeographic pattern within the hartebeest complex as related to climatic variation. O Flagstad PO Syvertsen NC Stenseth KS Jakobsen, Proc Biol Sci 2001 268 667 677 11321054 (Pubitemid 32322794)
67. Population genetics of the roan antelope (Hippotragus equinus) with suggestions for conservation. DL Alpers BJ Van Vuuren P Arctander TJ Robinson, Mol Ecol 2004 13 1771 1784 15189202 (Pubitemid 38847585)
68. Phylogeography and population structure of the common warthog (Phacochoerus africanus) inferred from variation in mitochondrial DNA sequences and microsatellite loci. VB Muwanika S Nyakaana HR Siegismund P Arctander, Heredity 2003 91 361 372 14512951 (Pubitemid 37274423)
69. Mitochondrial DNA variability in Giraffa camelopardalis : consequences for taxonomy, phylogeography and conservation of giraffes in West and central Africa. A Hassanin A Ropiquet AL Gourmand B Chardonnet J Rigoulet, C R Biol 2007 330 3 265 274 17434121 (Pubitemid 46547492)
70. The origin, current diversity and future conservation of the modern lion (Panthera leo). R Barnett N Yamaguchi I Barnes A Cooper, Proc Biol Sci 2006 273 2119 2125 16901830 (Pubitemid 44318300)
71. Fifty years of looking at human evolution backward, forward, and sideways. CJ Jolly, Curr Anthropol 2009 50 187 199
72. Temperature and rainfall estimates for the past 40,000 years in equatorial Africa. R Bonnefille JC Roeland J Guiot, Nature 1990 346 347 349 (Pubitemid 120005896)
73. The African rain-forest main characteristics of changes in vegetation and climate from the Upper Cretaceous to the Quaternary. J Maley, Essays on the Ecology of the Guinea-Congo Rain Forest Proc R Soc Edinburgh, Alexander IJ, Swaine MD, Watling R, 1996 104B 31 73 (Pubitemid 126814808)
74. Geomorphological evidence and Pleistocene refugia in Africa. JE Nichol, Geogr J 1999 165 79 89 (Pubitemid 29377516)
75. Mechanisms and tempo of evolution in the African Guineo-Congolian rainforest. V Plana, Philos Trans R Soc Lond B Biol Sci 2004 359 1585 1594 15519974 (Pubitemid 39471241)
76. A new genus of African monkey, Rungwecebus: Morphology, ecology, and molecular phylogenetics. TRB Davenport WT Stanley EJ Sargis DW De Luca NE Mpunga SJ Machaga LE Olson, Science 2006 312 1378 1381 16690815 (Pubitemid 43839549)
77. Short communication: Additional molecular evidence strongly supports the distinction between the recently described African primate Rungwecebus kipunji (Cercopithecidae, Papionini) and Lophocebus. LE Olson EJ Sargis WT Stanley KBP Hildebrandt TRB Davenport, Mol Phylogen Evol 2008 48 789 794 18595741
78. A comparison of anubis baboons, hamadryas baboons and their hybrids at a species border in Ethiopia. U Nagel, Folia Primatol 1973 19 104 165 4201907
79. Desert, forest and montane baboons. E Stammbach, Primate Societies Chicago: The University of Chicago Press, Smuts BB, Cheney DL, Seyfarth RM, Wrangham RW, Struhsaker TT, 1987 112 120
80. Pan-African Voyagers. Phylo-geography of baboons. D Zinner U Buba C Roos, Primates of Gashaka. Socioecology and Conservation in Nigeria's Biodiversity Hotspot New York: Springer, Sommer V, Ross C, 2009
81. A biometric study of Papio cynocephalus skulls from Northern Rhodesia and Nyasaland. L Freedman, J Mammal 1963 44 24 43
82. Genetic and behavioral observations of "Kinda" baboons (Papio cynocephalus kindae) in Zambia [abstract]. J Phillips-Conroy C Jolly A Burrell J Rogers A Weyher, Am J Phys Anthropol 2009 138 Suppl 48 324
83. Taxonomy of the baboon. WCO Hill, The Baboon in Medical Research II Austin, TX: University of Texas Press, Vagtborg H, 1967 3 11
84. Low Y chromosome variation in Saudi-Arabian hamadryas baboons (Papio hamadryas hamadryas). LJ Lawson Handley RL Hammond G Emaresi A Reber N Perrin, Heredity 2006 96 298 303 16508662
85. A multi-samples, multi-extracts approach for microsatellite analysis of faecel samples in an arboreal ape. B Goossens L Chikhi SS Utami JR De Ruiter MW Bruford, Conserv Genetics 2000 1 157 162
86. Mitochondrial phylogeny, taxonomy and biogeography of the silvered langur species group (Trachypithecus cristatus). C Roos T Nadler L Walter, Mol Phylogenet Evol 2008 47 629 636 18406631
87. Ancient DNA from giant extinct lemurs confirms single origin of Malagasy primates. KP Karanth T Delefosse B Rakotosamimanana TJ Parsons AD Yoder, Proc Natl Acad Sci USA 2005 102 5090 5095 15784742 (Pubitemid 40503744)
88. Mitochondrial DNA sequences of primates: Tempo and mode of evolution. WM Brown EM Prager A Wang AC Wilson, J Mol Evol 1982 18 225 239 6284948
89. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. TA Hall, Nucl Acids Symp Ser 1999 41 95 98
90. PAUP* Phylogenetic analysis using parsimony (*and other methods) Vers. 4. D Swofford, Sunderland, MA: Sinauer Associates 2002 12504223
91. Modeltest: testing the model of DNA substitution. D Posada KA Crandall, Bioinformatics 1998 14 817 818 9918953 (Pubitemid 28552116)
92. Genetic Algorithm Approaches for the Phylogenetic Analysis of Large Biological Sequence Data Sets under the Maximum Likelihood Criterion. DJ Zwickl, PhD thesis The University of Texas at Austin 2006
93. Bayesian inference of phylogeny and its impact on evolutionary biology. JP Huelsenbeck F Ronquist R Nielsen JP Bollback, Science 2001 294 2310 2314 11743192 (Pubitemid 33140548)
94. MrBayes 3: Bayesian phylogenetic inference under mixed models. F Ronquist JP Huelsenbeck, Bioinformatics 2003 19 1572 1574 12912839 (Pubitemid 37038874)
95. Inference from iterative simulation using multiple sequences. A Gelman D Rubin, Stat Sci 1992 7 457 511
96. Tracer v1.3: MCMC trace analysis tool. A Rambaut A Drummond, Institute of Evolutionary Biology, University of Edinburgh 2005 http://tree.bio.ed.ac.uk/ software/tracer/
97. TreeEdit: Phylogenetic tree editor v1.0 alpha 10. A Rambaut M Charleston, Department of Zoology, University of Oxford 2002 http://tree.bio.ed.ac.uk/ software/treeedit/
98. FigTree: Tree figure drawing tool, version 1.0. A Rambaut, Institute of Evolutionary Biology, University of Edinburgh 2006 http://tree.bio.ed.ac.uk/ software/figtree/
99. Relaxed phylogenetics and dating with confidence. AJ Drummond SYW Ho MJ Phillips A Rambaut, PLoS Biol 2006 4 e88 16683862 (Pubitemid 43748216)
100. Beast: Bayesian evolutionary analysis by sampling trees. AJ Drummond, BMC Evol Biol 2007 7 214 17996036
101. A new hominid from the Upper Miocene of Chad, Central Africa. M Brunet F Guy D Pilbeam HT Mackaye A Likius D Ahounta A Beauvilain C Blondel H Bocherens JR Boisserie L De Bonis Y Coppens J Dejax C Denys P Duringer V Eisenmann G Fanone P Fronty D Geraads T Lehmann F Lihoreau A Louchart A Mahamat G Merceron G Mouchelin O Otero P Pelaez Campomanes M Ponce De Leon JC Rage M Sapanet M Schuster J Sudre P Tassy X Valentin P Vignaud L Viriot A Zazzo C Zollikofer, Nature 2002 418 145 151 12110880
102. Geology and palaeontology of the Upper Miocene Toros-Menalla hominid locality, Chad. P Vignaud P Duringer HT Mackaye A Likius C Blondel JR Boisserie L De Bonis V Eisenmann ME Etienne D Geraads F Guy T Lehmann F Lihoreau N Lopez-Martinez C Mourer-Chauvire O Otero JC Rage M Schuster L Viriot A Zazzo M Brunet, Nature 2002 418 152 155 12110881
103. Primate molecular divergence dates. ME Steiper NM Young, Mol Phylogenet Evol 2006 41 384 394 16815047 (Pubitemid 44428198)
104. The hominoid radiation in Asia. J Kelley, The Primate Fossil Record Cambridge: Cambridge University Press, Hartwig WC, 2002 369 384
105. Catarrhine primate divergence dates estimated from complete mitochondrial genomes: concordance with fossil and nuclear DNA evidence. RL Raaum KN Sterner CM Noviello CB Stewart TR Disotell, J Hum Evol 2005 48 237 257 15737392 (Pubitemid 40301117)
106. Cercopithecidae. E Delson I Tattersall JA Van Couvering AS Brooks, Encyclopedia of Human Evolution and Prehistory New York: Garland, Delson E, Tattersall I, VanCouvering JA, Brooks AS, 2 2000 166 171
107. AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. JA Nylander JC Wilgenbusch DL Warren DL Swofford, Bioinformatics 2008 24 581 583 17766271