Predicting presence and abundance of demersal fishes: A model application to shortspine thornyhead Sebastolobus alascanus

Marine Ecology Progress Series

Volumn 379, Issue , 2009, Pages 253-266

  Rooper, Christopher N ^a   Martin, Michael H ^a  

^a NOAA Alaska Fisheries Science Center   (United States)

Author keywords

Alaska; Environmental variables; Fish distributions; Fish habitat; Rockfish

Indexed keywords

ABUNDANCE; BOTTOM TRAWLING; CATCH PER UNIT EFFORT; CRUSTACEAN; DEMERSAL FISH; ECOLOGICAL MODELING; ENVIRONMENTAL GRADIENT; GROWTH RATE; MARINE ECOSYSTEM; POPULATION DISTRIBUTION; REFUGE; SURVIVAL; TELEOST; TEMPERATURE EFFECT; THERMOCLINE; TRAWLING;

ALASKA; ALEUTIAN ISLANDS; GULF OF ALASKA; NORTH AMERICA; PACIFIC OCEAN; UNITED STATES;

DECAPODA (CRUSTACEA); PISCES; SEBASTOLOBUS ALASCANUS;

EID: 65649137669     PISSN: 01718630     EISSN: None     Source Type: Journal    
DOI: 10.3354/meps07906     Document Type: Article

References (42)

1. Akaike H (1992) Information theory and an extension of the maximum likelihood principle. In: Kotz S, Johnson N (eds) Breakthroughs in statistics, Vol 1. Springer-Verlag, New York, NY, p 610-624
2. Barry SC, Welsh AH (2002) Generalized additive modeling and zero inflated count data. Ecol Modell 157:179-188 (Pubitemid 35255414)
3. Britt LL, Martin MH (2001) Data report: 1999 Gulf of Alaska bottom trawl survey. NOAA Tech Memo NMFS-AFSC- 121. US Department of Commerce, Seattle, WA
4. Burnham KP, Anderson DR (2002) Model selection and multimodel inference: a practical information-theoretic approach, 2nd edn. Springer-Verlag, New York, NY
5. Else P, Haldorson L, Krieger K (2002) Shortspine thornyhead (Sebastolobus alascanus) abundance and habitat associations in the Gulf of Alaska. Fish Bull US 100:193-199 (Pubitemid 34577488)
6. Freese JL (2001) Trawl-induced damage to sponges observed from a research submersible. Mar Fish Rev 63:7-13 (Pubitemid 36409301)
7. Friedlander AM, Parrish JD (1998) Habitat characteristics affecting fish assemblages on a Hawaiian coral reef. J Exp Mar Biol Ecol 224:1-30 (Pubitemid 28162997)
8. Guisan A, Thuiller W (2005) Predicting species distribution: offering more than simple habitat models. Ecol Lett 8: 993-1009 (Pubitemid 41247275)
9. Harvey CJ (2005) Effects of El Nino events on energy demand and egg production of rockfish (Scorpaenidae: Sebastes): a bioenergetics approach. Fish Bull US 103:71-83 (Pubitemid 40181324)
10. Hilborn R, Mangel M (1997) The ecological detective: confronting models with data. Princeton University Press, Princeton, NJ
11. Hutchinson GE (1957) Concluding remarks. Cold Spring Harb Symp Quant Biol 22:415-427
12. Iles TC, Beverton RJH (2000) The concentration hypothesis: the statistical evidence. ICES J Mar Sci 57:216-227
13. Jacobson LD, Vetter RD (1996) Bathymetric demography and niche separation of thornyhead rockfish: Sebastolobus alascanus and Sebastolobus altivelis. Can J Fish Aquat Sci 53:600-609 (Pubitemid 26344220)
14. Ladd C, Hunt GL Jr, Mordy C, Salo S, Stabeno P (2005) Marine environment of the eastern and central Aleutian Islands. Fish Oceanogr 14:22-38 (Pubitemid 41718123)
15. Lauth RR, Ianelli J, Wakefield WW (2004a) Estimating the size selectivity and catching efficiency of a survey bottom trawl for thornyheads, Sebastolobus spp. using a towed video camera sled. Fish Res 70:27-37 (Pubitemid 39342682)
16. Lauth RR, Wakefield WW, Smith K (2004b) Estimating the density of thornyheads, Sebastolobus spp., using a towed video camera sled. Fish Res 70:39-48 (Pubitemid 39342683)
17. Logerwell EA, Aydin K, Barbeaux S, Brown E and others (2005) Geographic patterns in the demersal ichthyofauna of the Aleutian Islands. Fish Oceanogr 14:93-112 (Pubitemid 41721954)
18. Love MS, Yoklavich M, Thorsteinson L (2002) The rockfishes of the northeast Pacific. University of California Press, Berkeley and Los Angeles, CA
19. Martin TG, Wintle BA, Rhodes JR, Kuhnert PM and others (2005) Zero tolerance ecology: improving ecological inference by modeling the source of zero observations. Ecol Lett 8:1235-1246 (Pubitemid 41532407)
20. May RM (1973) Stability and complexity in model ecosystems. Princeton University Press, Princeton, NJ
21. Murawski SA, Finn JT (1988) Biological basis for mixed-species fisheries: species co-distribution in relation to environmental and biotic variables. Can J Fish Aquat Sci 45: 1720-1735
22. North Pacific Fishery Management Council (2007) Stock assessment and fishery evaluation report for the groundfish resources of the Gulf of Alaska, November 2007. North Pacific Fishery Management Council, Anchorage, AK
23. Pearcy WG, Stein DL, Hixon MA, Pikitch EK, Barss WH, Starr RM (1989) Submersible observations of deep-reef fishes of Heceta Bank, Oregon. Fish Bull US 87:955-965
24. Rooper CN (2008) An ecological analysis of rockfish (Sebastes spp.) assemblages in the north Pacific along broad-scale environmental gradients. Fish Bull US 171:1-11
25. Rooper CN, Boldt JL (2005) Distribution of juvenile Pacific ocean perch (Sebastes alutus) in the Aleutian Islands in relation to benthic habitat. Alaska Fish Res Bull 11: 102-112
26. Rooper CN, Zimmermann M, Spencer P (2005) Distribution of flathead sole (Hippoglossoides elassodon) by habitat in the eastern Bering Sea. Mar Ecol Prog Ser 290:251-262
27. Rooper CN, Boldt JL, Zimmermann M (2007) An assessment of juvenile Pacific ocean perch (Sebastes alutus) habitat use in a deepwater nursery. Estuar Coast Shelf Sci 75: 371-380 (Pubitemid 47488555)
28. Shono H (2008) Application of the Tweedie distribution to zero-catch data in CPUE analysis. Fish Res 93:154-162
29. Stauffer G (2004) NOAA protocols for groundfish bottom trawl surveys of the nation's fishery resources. NOAA Tech Memo NMFS-F/SPO-65. US Department of Commerce, Seattle, WA
30. Stein DL, Tissot BN, Hixon MA, Barss W (1992) Fish-habitat associations on a deep reef at the edge of the Oregon continental shelf. Fish Bull US 90:540-551 (Pubitemid 24409369)
31. Stoner AW, Manderson JP, Pessutti JP (2001) Spatially explicit analysis of estuarine habitat for juvenile winter flounder: combining generalized additive models and geographic information systems. Mar Ecol Prog Ser 213:253-271 (Pubitemid 32430593)
32. Strom SL, Olson MB, Macri EL, Mordy CW (2006) Cross-shelf gradients in phytoplankton community structure, nutrient utilization, and growth rate in the coastal Gulf of Alaska. Mar Ecol Prog Ser 328:75-92 (Pubitemid 46153669)
33. Swartzman G, Huang C, Kaluzny S (1992) Spatial analysis of Bering Sea groundfish survey data using generalized additive models. Can J Fish Aquat Sci 49:1366-1378 (Pubitemid 23395176)
34. Tolimieri N, Levin PS (2006) Assemblage structure of eastern Pacific groundfishes on the U. S. continental slope in relation to physical and environmental variables. Trans Am Fish Soc 135:317-332
35. Walsh SJ, Simpson M, Morgan MJ (2004) Continental shelf nurseries and recruitment variability in American plaice and yellowtail flounder on the Grand Bank: insights into stock resiliency. J Sea Res 51:271-286 (Pubitemid 38583672)
36. Weinberg KL (1994) Rockfish assemblages of the middle shelf and upper slope off Oregon and Washington. Fish Bull US 92:620-632 (Pubitemid 2129474)
37. Welsh AH, Cunningham RB, Donnelly CF, Lindenmayer DB (1996) Modelling the abundance of rare species: statistical models for counts with extra zeros. Ecol Modell 88: 297-308 (Pubitemid 126649480)
38. Whitney FA, Crawford WR, Harrison PJ (2005) Physical processes that enhance nutrient transport and primary productivity in the coastal and open ocean of the subarctic NE Pacific. Deep-Sea Res II 52:681-706 (Pubitemid 40534514)
39. Williams EH, Ralston S (2002) Distribution and co-occurrence of rockfishes (family: Sebastidae) over trawlable shelf and slope habitats of California and southern Oregon. Fish Bull US 100:836-855 (Pubitemid 35326203)
40. Yang MS (2003) Food habits of the important groundfishes in the Aleutian Islands in 1994 and 1997. AFSC Processed Report 2003-07. US Department of Commerce, Seattle, WA
41. Yang MS, Dodd K, Hibpshman R, Whitehouse A (2006) Food habits of groundfishes in the Gulf of Alaska in 1999 and 2001. NOAA Tech Memo NMFS-AFSC-164. US Department of Commerce, Seattle, WA
42. Zenger HH Jr (2004) Data report: 2002 Aleutian Islands bottom trawl survey. NOAA Tech Memo NMFS-AFSC-143. US Department of Commerce, Seattle, WA