메뉴 건너뛰기




Volumn 75, Issue 4, 2009, Pages 329-343

3D Image stack reconstruction in liwe cell microscopf of drosophila muscles and its validation

Author keywords

3D reconstruction; Confecal microscopy; Drosophila; Live cell Imaging; Metamorphosis; Muscle development; Nonrigld registration; Thin plate spline

Indexed keywords

ANIMAL CELL; ARTICLE; DROSOPHILA; IMAGE ANALYSIS; IMAGE DISPLAY; IMAGE RECONSTRUCTION; LASER MICROSCOPY; METAMORPHOSIS; NONHUMAN; PRIORITY JOURNAL;

EID: 65549141354     PISSN: 15524922     EISSN: 15524930     Source Type: Journal    
DOI: 10.1002/cyto.a.20701     Document Type: Article
Times cited : (14)

References (59)
  • 1
    • 34548576414 scopus 로고
    • Extraction, purification and properties of aequorin, a bioluminescent protein from the luminous hydromedusan. aequorea
    • Shimomura Oj Johnson FHj Saiga Y. Extraction, purification and properties of aequorin, a bioluminescent protein from the luminous hydromedusan. Aequorea. J Cell Comp Physiol 1962;59:223-239.
    • (1962) J Cell Comp Physiol , vol.59 , pp. 223-239
    • Shimomura, O.1    Johnson, F.H.2    Saiga, Y.3
  • 5
    • 0036823116 scopus 로고    scopus 로고
    • Spinning-disk confocal microscopy-a cutting-edge tool for imaging of membrane traffic
    • Nakano A. Spinning-disk Confocal Microscopy-A cutting-edge tool for imaging of membrane traffic. Cell Slrucl Funct 2002;5:349-355.
    • (2002) Cell Slrucl Funct , vol.5 , pp. 349-355
    • Nakano, A.1
  • 6
    • 33847318630 scopus 로고    scopus 로고
    • High-speed eonfocal fluorescence imaging with a novel line scanning microscope
    • Wolleschensky R, Zimmermann B, Kempe M. High-speed eonfocal fluorescence imaging with a novel line scanning microscope. I Biomed Opl 2006;11:064011.
    • (2006) J Biomed Opt , vol.11 , pp. 064011
    • Wolleschensky, R.1    Zimmermann, B.2    Kempe, M.3
  • 7
    • 4043090758 scopus 로고    scopus 로고
    • Optical sectioning deep inside live embryos by selective plane illumination microscopy
    • Huisken J, Svvoger j, Del Bene F3 WItthrodt J, Slelzer EH. Optical sectioning deep inside live embryos by selective plane illumination microscopy. Science 2004; 305:1007-1009.
    • (2004) Science , vol.305 , pp. 1007-1009
    • Huisken, J.1    Svvoger, J.2    Del Bene, F.3    Wittbrodt, J.4    Slelzer, E.H.5
  • 8
    • 56449123775 scopus 로고    scopus 로고
    • Reconstruction of zebraiish early embryonic development by scanned light sheel microscopy
    • Keller PI, Schmidt AD, Witthrodt J, Stelzer EH, Reconstruction of zebraiish early embryonic development by scanned light sheel microscopy. Science 2008;322:1065-1069.
    • (2008) Science , vol.322 , pp. 1065-1069
    • Keller, P.J.1    Schmidt, A.D.2    Witthrodt, J.3    Stelzer, E.H.4
  • 9
    • 0002616644 scopus 로고
    • The post embryonic development of drofophila
    • Demerec M, editor. Biology of Drosophila. New York and London:
    • Bodenstein D. The Post embryonic Development of Drofophila. In: Demerec M, editor. Biology of Drosophila. New York and London: Hafner Publishing Company; 1965. pp 275-367.
    • (1965) Hafner Publishing Company , pp. 275-367
    • Bodenstein, D.1
  • 10
    • 0037446021 scopus 로고    scopus 로고
    • Gfp in living animals reveals dynamic deveiopmenlal responses to ecdysone during drosophila rnelamor-phosis
    • Ward RE, Reid P, Bashirullah A, D'Avino PP, Thummel CS. GFP in living animals reveals dynamic deveiopmenlal responses to ecdysone during Drosophila rnelamor-phosis. Dev Biol 2003;256:389-402.
    • (2003) Dev Biol , vol.256 , pp. 389-402
    • Ward, R.E.1    Reid, P.2    Bashirullah, A.3    D'Avino, P.P.4    Thummel, C.S.5
  • 11
    • 34548088887 scopus 로고    scopus 로고
    • Local initiation of caspase activation in drosophila salivary gland programmed cell death in vivo
    • Takemoto K, Kuranaga E, Tonoki A3 Nagai T, Miyavvaki A, Miura M. Local initiation of caspase activation in Drosophila salivary gland programmed cell death in vivo. Proc Natl Acad Sci USA 2007;104:13367-13372.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 13367-13372
    • Takemoto, K.1    Kuranaga, E.2    Tonoki, A.3    Nagai, T.4    Miyavvaki, A.5    Miura, M.6
  • 12
    • 0025317162 scopus 로고
    • Postmetamorphic cell death in the nervous and muscular systems of drosophila melanogaster
    • Kimura KI, Truman JW. Postmetamorphic cell death in the nervous and muscular systems of Drosophila melanogaster. J Neurosci 1990;10:403-411.
    • (1990) J Neurosci , vol.10 , pp. 403-411
    • Kimura, K.I.1    Truman, J.W.2
  • 13
    • 34347347252 scopus 로고    scopus 로고
    • East and chromator control the destruction and remodeling of muscles during drosophila metamorphosis
    • Wasser M, Bte Osman Z, Chi a W. EAST and Chromator control the destruction and remodeling of muscles during Drosophila metamorphosis, Dev Biol 2007;307:380-393.
    • (2007) Dev Biol , vol.307 , pp. 380-393
    • Wasser, M.1    Bte Osman, Z.2    Chia, W.3
  • 14
    • 0242580739 scopus 로고    scopus 로고
    • Digitizing life at the level of the cell; high-performance laser-scanning microscopy and image analysis for in toto imaging of development
    • Megason SG, Fraser SE, Digitizing life at the level of the cell; High-performance laser-scanning microscopy and image analysis for in toto imaging of development. Mech Dev 2003;120:1407-1420.
    • (2003) Mech Dev , vol.120 , pp. 1407-1420
    • Megason, S.G.1    Fraser, S.E.2
  • 15
    • 84882552860 scopus 로고    scopus 로고
    • In; Wu Q, Merchant E, Castleman K, editors. Microscope Image Processing, Burlington, MA: Blsevier Academic Press;
    • Meijering E, Smal I, Dzyubachyk O, Olivo-Marin JC. Time-Lapse Microscopy Imaging. In; Wu Q, Merchant E, Castleman K, editors. Microscope Image Processing, Burlington, MA: Blsevier Academic Press; 2008; p 401-440.
    • (2008) Time-Lapse Microscopy Imaging , pp. 401-440
    • Meijering, E.1    Smal, I.2    Dzyubachyk, O.3    Olivo-Marin, J.C.4
  • 16
    • 10044234516 scopus 로고    scopus 로고
    • Image stabilization and registration for tracking cells in the microvasculature
    • Goobic AP, Tang J, Acton ST. Image stabilization and registration for tracking cells in the microvasculature. IEEE Trans Biomed Eng 2005;52:287-299,
    • (2005) IEEE Trans Biomed Eng , vol.52 , pp. 287-299
    • Goobic, A.P.1    Tang, J.2    Acton, S.T.3
  • 18
    • 0026967479 scopus 로고
    • A survey of image registration techniques
    • Brown LG. A survey of image registration techniques. ACM Comput Surv 1992; 24:326-376.
    • (1992) ACM Comput Surv , vol.24 , pp. 326-376
    • Brown, L.G.1
  • 19
    • 0043237770 scopus 로고    scopus 로고
    • Image registration methods: A survey
    • Zitova B, Elusser J. Image registration methods: A Survey. Image Vis Comput 2003:21:977-1000.
    • (2003) Image Vis Comput , vol.21 , pp. 977-1000
    • Zitova, B.1    Elusser, J.2
  • 20
    • 0022717567 scopus 로고
    • A region-based approach to digital image registration with subpixel accuracy
    • Goshtasby A, Stockman GC, Page CV. A region-based approach to digital image registration with subpixel accuracy. IEEE Trans Geosci Remote Sensing 1986;24:390-399.
    • (1986) IEEE Trans Geosci Remote Sensing , vol.24 , pp. 390-399
    • Goshtasby, A.1    Stockman, G.C.2    Page, C.V.3
  • 21
    • 0017480461 scopus 로고
    • Geometrical referencing of landsat images by affine transformation and overlaying of map data
    • Steiner D, Kirfoy ME. Geometrical referencing of Landsat images by affine transformation and overlaying of map data. Photogrammetria 1977;33:41-75.
    • (1977) Photogrammetria , vol.33 , pp. 41-75
    • Steiner, D.1    Kirfoy, M.E.2
  • 22
  • 23
    • 0017517122 scopus 로고
    • A landsat digital image rectification system
    • IEEE Trans
    • Wie PV, Stein M. A landsat digital image rectification system. IEEE Trans. Geosci Electron 1977:15:130-137.
    • (1977) Geosci Electron , vol.15 , pp. 130-137
    • Wie, P.V.1    Stein, M.2
  • 24
    • 0022927448 scopus 로고
    • Piecewise linear mapping functions for image registration
    • Goshtasby A. Piecewise linear mapping functions for image registration. Pattern Recognit 'i 986; 19:459-466.
    • (1986) Pattern Recognit , vol.19 , pp. 459-466
    • Goshtasby, A.1
  • 26
    • 0023843547 scopus 로고
    • Registration of images with geometric distortion
    • Goshtasby A. Registration of images with geometric distortion, IEEE Trans Geosci Remote Sensing 1988;26:60-64.
    • (1988) IEEE Trans Geosci Remote Sensing , vol.26 , pp. 60-64
    • Goshtasby, A.1
  • 27
    • 0026614102 scopus 로고
    • An adaptive method for image registration
    • jan E. An adaptive method for image registration. Pattern Recognit 1992:25:45-54.
    • (1992) Pattern Recognit , vol.25 , pp. 45-54
    • Jan, E.1
  • 29
    • 0029719428 scopus 로고    scopus 로고
    • Deformations incorporating rigid structures. proceedings of the 1996 workshop on mathematical methods in biomedical image analysis (mmbia'96)
    • Little JA, Hill DLG, Hawkes Df. Deformations Incorporating Rigid Structures. Proceedings of the 1996 Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA'96): IEEE Comput Soc; 1996. p 104.
    • (1996) IEEE Comput Soc , pp. 104
    • Little, J.A.1    Hill, D.L.G.2    Hawkes, D.F.3
  • 30
    • 0035149435 scopus 로고    scopus 로고
    • Radial basis functions with compact support for elastic registration of medical images
    • Fornefett M, Rohr K, Stiehl HS. Radial basis functions with compact support for elastic registration of medical images. Image Vis Comput 2001;19:87-96,
    • (2001) Image Vis Comput , vol.19 , pp. 87-96
    • Fornefett, M.1    Rohr, K.2    Stiehl, H.S.3
  • 38
    • 84925245477 scopus 로고
    • Registration of translated and rotated images using finite fourier transform
    • Catro ED, Morandi C. Registration of translated and rotated images using finite Fourier transform, IEEE Trans Pattern Anal Mach Intel! 1987;29:700-703.
    • (1987) IEEE Trans Pattern Anal Mach Intell , vol.29 , pp. 700-703
    • Catro, E.D.1    Morandi, C.2
  • 39
    • 0030212172 scopus 로고    scopus 로고
    • An fft-foased technique for translation, rotation and scale-invariant image registration
    • Reddy BS, Chatterji BN. An FFT-foased technique for translation, rotation and scale-invariant image registration, IEEE Trans Image Process 1996;5:1266-1271.
    • (1996) IEEE Trans Image Process , vol.5 , pp. 1266-1271
    • Reddy, B.S.1    Chatterji, B.N.2
  • 41
    • 0031221119 scopus 로고    scopus 로고
    • Alignment by maximization of mutual information
    • Viola P, Wells WM. Alignment by maximization of mutual information. Int J Corn-put Vis 1997;24:137-154.
    • (1997) Int J Corn-put Vis , vol.24 , pp. 137-154
    • Viola, P.1    Wells, W.M.2
  • 44
    • 0344121207 scopus 로고    scopus 로고
    • Zen and the art of medical image registration: Correspondence, homology, and quality
    • Crum WR, Griffin LD, Hill DL, Hawkes DJ. Zen and the art of medical image registration: Correspondence, homology, and quality. Neuroimage 2003;20:1425-1437,
    • (2003) Neuroimage , vol.20 , pp. 1425-1437
    • Chen, W.R.1    Griffin, L.D.2    Hill, D.L.3    Hawkes, D.J.4
  • 45
    • 0035515458 scopus 로고    scopus 로고
    • Antisocial, an intracellular adaptor protein, is required for myo-blast fusion in drosophih
    • Chen EH, Olson EN. Antisocial, an intracellular adaptor protein, is required for myo-blast fusion in Drosophih, Dev Cell 2001; 1:705-715.
    • (2001) Dev Cell , vol.1 , pp. 705-715
    • Chen, E.H.1    Olson, E.N.2
  • 46
    • 0028827602 scopus 로고
    • The gal4 system as a tool for unravelling the mysteries of the drosophila nervous system
    • Brand AH, Dormand EL. The GAL4 system as a tool for unravelling the mysteries of the Drosophila nervous system. Curr Opin Neurobiol 1995;5:572-578.
    • (1995) Curr Opin Neurobiol , vol.5 , pp. 572-578
    • Brand, A.H.1    Dormand, E.L.2
  • 47
    • 20144384390 scopus 로고    scopus 로고
    • Lethal giant larvae controls the localization of notch-signal ing regulators numb, neuralized, and sanpodo in drosophila sensory-organ precursor cells
    • Langevin J, Le Borgne R, Rosenfeld E, Gho M, Schweisguth F, Bellaiche Y. Lethal giant larvae controLs the localization of notch-signal ing regulators numb, neuralized, and Sanpodo in Drosophila sensory-organ precursor cells. Curr Biol 2005; 15:955-962.
    • (2005) Curr Biol , vol.15 , pp. 955-962
    • Langevin, J.1    Le Borgne, R.2    Rosenfeld, E.3    Gho, M.4    Schweisguth, F.5    Bellaiche, Y.6
  • 48
    • 0027728130 scopus 로고
    • Confocal microscopy: Important considerations for accurate imaging
    • Majlof L, Forsgren PO, Confocal microscopy: Important considerations for accurate imaging. Methods Cell Biol 1993;38:79-95.
    • (1993) Methods Cell Biol , vol.38 , pp. 79-95
    • Majlof, L.1    Forsgren, P.O.2
  • 49
    • 79957563017 scopus 로고
    • Principal warps: Thin-plate splines and the decomposition of deformations
    • Bookstein PL, Principal Warps: Thin-plate splines and the decomposition of deformations. Pallern Anal Mach Inlell 1989; 11:567-585.
    • (1989) Pallern Anal Mach Inlell , vol.11 , pp. 567-585
    • Bookstein, P.L.1
  • 50
    • 7044231907 scopus 로고    scopus 로고
    • Estimating topology preserving and smooth displacement fields
    • Bilge K, Estimating topology preserving and smooth displacement fields. IEEE Trans Med Imaging 2004;23:868-880.
    • (2004) IEEE Trans Med Imaging , vol.23 , pp. 868-880
    • Bilge, K.1
  • 52
    • 0035399064 scopus 로고    scopus 로고
    • Topology preserving deformable image matching using constrained hierarchical paramedic models
    • Image Process
    • Musse O, Heitz P, Armspacli IP, Topology preserving deformable image matching using constrained hierarchical paramedic models. IEEE Trans, linage Process 2001;10:1081-1093.
    • (2001) IEEE Trans , vol.10 , pp. 1081-1093
    • Musse, O.1    Heitz, P.2    Armspacli, I.P.3
  • 53
    • 34447576428 scopus 로고    scopus 로고
    • Image regislratlon framework for large-scale longitudinal mri data sets: Strategy and validation
    • Csapo I, Holland C, Guttmann C. Image regislratlon framework for large-scale longitudinal MRI data sets: Strategy and validation. Magn Reson imaging 2007;25:889-893.
    • (2007) Magn Reson imaging , vol.25 , pp. 889-893
    • Csapo, I.1    Holland, C.2    Guttmann, C.3
  • 54
    • 84868935441 scopus 로고    scopus 로고
    • Available at
    • Qpen CV, Available at http://sourceforge.net/projects/opencYlIbrary.
    • Open CV
  • 55
    • 84868918572 scopus 로고    scopus 로고
    • Auto Aligner Version 6, Available at
    • Bitplane. Auto Aligner Version 6, Available at http://www.bitplane.com/ go/produets/autoaligner.
    • Bitplane
  • 56
    • 84868927202 scopus 로고    scopus 로고
    • Available at
    • Thevenaz P. StackReg. Available at http://bigwwvv.epfl.ch/thevenaz/ stackreg/; 2005.
    • (2005) Stack Reg
    • Thevenaz, P.1
  • 57
    • 33750731251 scopus 로고    scopus 로고
    • Consistent and elastic registration of histological sections using vector-spline regularization. cvamia: (computer vision approaches to medical image analysis
    • Arganda-Carreras I, Sorzano COS, Marablni R, Carazo JM, Ortiz de Solorzano C, Kybic J. (Consistent and Elastic Registration of Histological Sections using Vector-Spline Regularization. CVAMIA: Computer Vision Approaches to Medical Image Analysis, Lecture Notes in Computer Science 2G06;4241:85-95,
    • (2006) Lecture Notes in Computer Science , vol.4241 , pp. 85-95
    • Arganda-Carreras, I.1    Sorzano, C.O.S.2    Marablni, R.3    Carazo, J.M.4    Ortiz De Solorzano, C.5    Kybic, J.6
  • 59
    • 34548299771 scopus 로고    scopus 로고
    • A multi-model approach to simultaneous segmentation and classification of heterogeneous populations of cell nuclei in 3d confocal microscope images
    • Lin G, Chawla MK, Olson K, Barnes CA Guzowski JR Bjornsson C, Shain W, Roy-sam B. A multi-mode! approach to simultaneous segmentation and classification of heterogeneous populations of cell nuclei in 3D confocal microscope images. Cytome-try Part A 2007;71A:724-736.
    • (2007) Cytome-try Part A , vol.71 , pp. 724-736
    • Lin, G.1    Chawla, M.K.2    Olson, K.3    Barnes, C.A.4    Guzowski, J.F.5    Bjornsson, C.6    Shain, W.7    Roy-sam, B.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.