메뉴 건너뛰기




Volumn 4, Issue 4, 2009, Pages

A method to quantify mouse coat-color proportions

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL EXPERIMENT; ARTICLE; CAMERA; COMPUTER GRAPHICS; CONTROLLED STUDY; DIGITAL IMAGING; EPIGENETICS; HAIR COLOR; INFORMATION PROCESSING; MOSAICISM; MOUSE; NONHUMAN; PIGMENTATION; QUANTITATIVE ANALYSIS; ANIMAL; COLOR; FACTUAL DATABASE; GENETIC EPIGENESIS; IMAGE PROCESSING; METHODOLOGY; TECHNIQUE;

EID: 65549107300     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0005414     Document Type: Article
Times cited : (9)

References (38)
  • 1
    • 0031020025 scopus 로고    scopus 로고
    • Inherited somatic mosaicism caused by an intracisternal A particle insertion in the mouse tyrosinase gene
    • Wu M, Rinchik EM, Wilkinson E, Johnson DK (1997) Inherited somatic mosaicism caused by an intracisternal A particle insertion in the mouse tyrosinase gene. Proc Natl Acad Sci USA 94: 890-894.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 890-894
    • Wu, M.1    Rinchik, E.M.2    Wilkinson, E.3    Johnson, D.K.4
  • 2
    • 0031873353 scopus 로고    scopus 로고
    • Maternal epigenetics and methyl supplements affect agouti gene expression in Avy/a mice
    • Wolff GL, Kodell RL, Moore SR, Cooney CA (1998) Maternal epigenetics and methyl supplements affect agouti gene expression in Avy/a mice. FASEB J 12: 949-957.
    • (1998) FASEB J , vol.12 , pp. 949-957
    • Wolff, G.L.1    Kodell, R.L.2    Moore, S.R.3    Cooney, C.A.4
  • 3
    • 0001227499 scopus 로고    scopus 로고
    • Early canid domestication: The farm-fox experiment
    • Trut LN (1999) Early canid domestication: the farm-fox experiment. Am Sci 87: 160-169.
    • (1999) Am Sci , vol.87 , pp. 160-169
    • Trut, L.N.1
  • 4
    • 3543073392 scopus 로고    scopus 로고
    • Reprogramming of a melanoma genome by nuclear transplantation
    • Hochedlinger K, Blelloch R, Brennan C, Yamada Y, Kim M, et al. (2004) Reprogramming of a melanoma genome by nuclear transplantation. Genes Dev 18: 1875-1885.
    • (2004) Genes Dev , vol.18 , pp. 1875-1885
    • Hochedlinger, K.1    Blelloch, R.2    Brennan, C.3    Yamada, Y.4    Kim, M.5
  • 5
    • 0842325730 scopus 로고    scopus 로고
    • Dnmt1 expression in pre- and postimplantation embryogenesis and the maintenance of IAP silencing
    • Gaudet F, Rideout WM 3rd, Meissner A, Dausman J, Leonhardt H, et al. (2004) Dnmt1 expression in pre- and postimplantation embryogenesis and the maintenance of IAP silencing. Mol Cell Biol 24: 1640-1648.
    • (2004) Mol Cell Biol , vol.24 , pp. 1640-1648
    • Gaudet, F.1    Rideout 3rd, W.M.2    Meissner, A.3    Dausman, J.4    Leonhardt, H.5
  • 6
    • 20844437561 scopus 로고    scopus 로고
    • Localizing the X-linked orange colour phenotype using feline resource families
    • Grahn RA, Lemesch BM, Millon LV, Matise T, Rogers QR, et al. (2005) Localizing the X-linked orange colour phenotype using feline resource families. Anim Genet 36: 67-70.
    • (2005) Anim Genet , vol.36 , pp. 67-70
    • Grahn, R.A.1    Lemesch, B.M.2    Millon, L.V.3    Matise, T.4    Rogers, Q.R.5
  • 7
    • 0021358883 scopus 로고
    • Formation of germ-line chimaeras from embryo-derived teratocarcinoma cell lines
    • Bradley A, Evans M, Kaufman MH, Robertson E (1984) Formation of germ-line chimaeras from embryo-derived teratocarcinoma cell lines. Nature 309: 255-256.
    • (1984) Nature , vol.309 , pp. 255-256
    • Bradley, A.1    Evans, M.2    Kaufman, M.H.3    Robertson, E.4
  • 8
    • 0035189927 scopus 로고    scopus 로고
    • Embryo-derived stem cells: Of mice and men
    • Smith AG (2001) Embryo-derived stem cells: of mice and men. Annu Rev Cell Dev Biol 17: 435-462.
    • (2001) Annu Rev Cell Dev Biol , vol.17 , pp. 435-462
    • Smith, A.G.1
  • 9
    • 57649245579 scopus 로고    scopus 로고
    • Germline competent embryonic stem cells derived from rat blastocysts
    • Li P, Tong C, Mehrian-Shai R, Jia L, Wu N, et al. (2008) Germline competent embryonic stem cells derived from rat blastocysts. Cell 135: 1299-1310.
    • (2008) Cell , vol.135 , pp. 1299-1310
    • Li, P.1    Tong, C.2    Mehrian-Shai, R.3    Jia, L.4    Wu, N.5
  • 10
    • 0017844230 scopus 로고
    • Influence of maternal phenotype on metabolic differentiation of agouti locus mutants in the mouse
    • Wolff GL (1978) Influence of maternal phenotype on metabolic differentiation of agouti locus mutants in the mouse. Genetics 88: 529-539.
    • (1978) Genetics , vol.88 , pp. 529-539
    • Wolff, G.L.1
  • 13
    • 0033547260 scopus 로고    scopus 로고
    • Physiological consequences of ectopic agouti gene expression: The yellow obese mouse syndrome
    • Wolff GL, Roberts DW, Mountjoy KG (1999) Physiological consequences of ectopic agouti gene expression: the yellow obese mouse syndrome. Physiol Genomics 1: 151-163.
    • (1999) Physiol Genomics , vol.1 , pp. 151-163
    • Wolff, G.L.1    Roberts, D.W.2    Mountjoy, K.G.3
  • 15
    • 0036322831 scopus 로고    scopus 로고
    • Maternal methyl supplements in mice affect epigenetic variation and DNA methylation of offspring
    • Cooney CA, Dave AA, Wolff GL (2002) Maternal methyl supplements in mice affect epigenetic variation and DNA methylation of offspring. J Nutr 132: 2393S-2400S.
    • (2002) J Nutr , vol.132
    • Cooney, C.A.1    Dave, A.A.2    Wolff, G.L.3
  • 16
    • 0043093697 scopus 로고    scopus 로고
    • Transposable elements: Targets for early nutritional effects on epigenetic gene regulation
    • Waterland RA, Jirtle RL (2003) Transposable elements: targets for early nutritional effects on epigenetic gene regulation. Mol Cell Biol 23: 5293-5300.
    • (2003) Mol Cell Biol , vol.23 , pp. 5293-5300
    • Waterland, R.A.1    Jirtle, R.L.2
  • 17
    • 84889330137 scopus 로고    scopus 로고
    • Maternal Nutrition: Nutrients and Control of Expression
    • Kaput J, Rodriguez RL, eds, Hoboken: John Wiley and Sons. pp
    • Cooney CA (2006) Maternal Nutrition: Nutrients and Control of Expression. In: Kaput J, Rodriguez RL, eds. Nutrigenomics: Concepts and Technologies. Hoboken: John Wiley and Sons. pp 219-254.
    • (2006) Nutrigenomics: Concepts and Technologies , pp. 219-254
    • Cooney, C.A.1
  • 18
    • 33751242483 scopus 로고    scopus 로고
    • Germ-line epigenetic modification of the murine Avy allele by nutritional supplementation
    • Cropley JE, Suter CM, Beckman KB, Martin DI (2006) Germ-line epigenetic modification of the murine Avy allele by nutritional supplementation. Proc Natl Acad Sci USA 103: 17308-17312.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 17308-17312
    • Cropley, J.E.1    Suter, C.M.2    Beckman, K.B.3    Martin, D.I.4
  • 19
    • 33645633542 scopus 로고    scopus 로고
    • Maternal genistein alters coat color and protects Avy mouse offspring from obesity by modifying the fetal epigenome
    • Dolinoy DC, Weidman JR, Waterland RA, Jirtle RL (2006) Maternal genistein alters coat color and protects Avy mouse offspring from obesity by modifying the fetal epigenome. Environ Health Perspect 114: 567-572.
    • (2006) Environ Health Perspect , vol.114 , pp. 567-572
    • Dolinoy, D.C.1    Weidman, J.R.2    Waterland, R.A.3    Jirtle, R.L.4
  • 20
    • 5344244656 scopus 로고    scopus 로고
    • R Foundation for Statistical Computing. Vienna, Austria ISBN 3-900051-07-0, URL
    • R Development Core Team (2008) R: A language and environment for statistical computing. R Foundation for Statistical Computing. Vienna, Austria ISBN 3-900051-07-0, URL http://www.R-project.org.
    • (2008) R: A language and environment for statistical computing
  • 21
    • 0023615056 scopus 로고
    • A comparison of the two one-sided tests procedure and the power approach for assessing the equivalence of average bioavailability
    • Schuirmann DJ (1987) A comparison of the two one-sided tests procedure and the power approach for assessing the equivalence of average bioavailability. J Pharmacokinet Biopharm 15: 657-680.
    • (1987) J Pharmacokinet Biopharm , vol.15 , pp. 657-680
    • Schuirmann, D.J.1
  • 22
    • 84908219488 scopus 로고
    • Statistical methods for assessing agreement between two methods of clinical measurement
    • Bland JM, Altman DG (1986) Statistical methods for assessing agreement between two methods of clinical measurement. Lancet 1: 307-310.
    • (1986) Lancet , vol.1 , pp. 307-310
    • Bland, J.M.1    Altman, D.G.2
  • 23
    • 34347375489 scopus 로고    scopus 로고
    • Agreement between methods of measurement with multiple observations per individual
    • Bland JM, Altman DG (2007) Agreement between methods of measurement with multiple observations per individual. J Biopharm Stat 17: 571-582.
    • (2007) J Biopharm Stat , vol.17 , pp. 571-582
    • Bland, J.M.1    Altman, D.G.2
  • 24
    • 65549138286 scopus 로고    scopus 로고
    • Assess agreement in terms of accuracy, scale differential, and precision
    • Van Belle G, ed, New York: John Wiley & Sons, Inc. pp
    • Van Belle G (2002) Assess agreement in terms of accuracy, scale differential, and precision. In: Van Belle G, ed. Statistical Rules of Thumb. New York: John Wiley & Sons, Inc. pp 65-68.
    • (2002) Statistical Rules of Thumb , pp. 65-68
    • Van Belle, G.1
  • 25
    • 48249153186 scopus 로고
    • Intraclass correlations: Uses in assessing rater reliability
    • Shrout PE, Fleiss JL (1979) Intraclass correlations: uses in assessing rater reliability. Psychol Bull 86: 420-428.
    • (1979) Psychol Bull , vol.86 , pp. 420-428
    • Shrout, P.E.1    Fleiss, J.L.2
  • 27
    • 0024473608 scopus 로고
    • Germ-line transmission of a cabl mutation produced by targeted gene disruption in ES cells
    • Schwartzberg PL, Goff SP, Robertson EJ (1989) Germ-line transmission of a cabl mutation produced by targeted gene disruption in ES cells. Science 246: 799-803.
    • (1989) Science , vol.246 , pp. 799-803
    • Schwartzberg, P.L.1    Goff, S.P.2    Robertson, E.J.3
  • 28
    • 0024332217 scopus 로고
    • Germ-line transmission of a planned alteration made in a hypoxanthine phosphoribosyltransferase gene by homologous recombination in embryonic stem cells
    • Koller BH, Hagemann LJ, Doetschman T, Hagaman JR, Huang S, et al. (1989) Germ-line transmission of a planned alteration made in a hypoxanthine phosphoribosyltransferase gene by homologous recombination in embryonic stem cells. Proc Natl Acad Sci USA 86: 8927-8931.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 8927-8931
    • Koller, B.H.1    Hagemann, L.J.2    Doetschman, T.3    Hagaman, J.R.4    Huang, S.5
  • 29
  • 30
    • 57649181379 scopus 로고    scopus 로고
    • Capture of authentic embryonic stem cells from rat blastocysts
    • Buehr M, Meek S, Blair K, Yang J, Ure J, et al. (2008) Capture of authentic embryonic stem cells from rat blastocysts. Cell 135: 1287-1298.
    • (2008) Cell , vol.135 , pp. 1287-1298
    • Buehr, M.1    Meek, S.2    Blair, K.3    Yang, J.4    Ure, J.5
  • 31
    • 0033492532 scopus 로고    scopus 로고
    • 5-Methylcytosine distribution and genome organization in triticale before and after treatment with 5-azacytidine
    • Castilho A, Neves N, Rufini-Castiglione M, Viegas W, Heslop-Harrison JS (1999) 5-Methylcytosine distribution and genome organization in triticale before and after treatment with 5-azacytidine. J Cell Sci 112(Pt 23): 4397-4404.
    • (1999) J Cell Sci , vol.112 , Issue.PART 23 , pp. 4397-4404
    • Castilho, A.1    Neves, N.2    Rufini-Castiglione, M.3    Viegas, W.4    Heslop-Harrison, J.S.5
  • 32
    • 46349098081 scopus 로고    scopus 로고
    • A simple algorithm for quantifying DNA methylation levels on multiple independent CpG sites in bisulfite genomic sequencing electropherograms
    • Leakey TI, Zielinski J, Siegfried RN, Siegel ER, Fan CY, et al. (2008) A simple algorithm for quantifying DNA methylation levels on multiple independent CpG sites in bisulfite genomic sequencing electropherograms. Nucleic Acids Res 36: e64.
    • (2008) Nucleic Acids Res , vol.36
    • Leakey, T.I.1    Zielinski, J.2    Siegfried, R.N.3    Siegel, E.R.4    Fan, C.Y.5
  • 33
    • 54049121723 scopus 로고    scopus 로고
    • In situ detection of methylated DNA by histo endonuclease-linked detection of methylated DNA sites: A new principle of analysis of DNA methylation
    • Koji T, Kondo S, Hishikawa Y, An S, Sato Y (2008) In situ detection of methylated DNA by histo endonuclease-linked detection of methylated DNA sites: a new principle of analysis of DNA methylation. Histochem Cell Biol 130: 917-925.
    • (2008) Histochem Cell Biol , vol.130 , pp. 917-925
    • Koji, T.1    Kondo, S.2    Hishikawa, Y.3    An, S.4    Sato, Y.5
  • 34
    • 65549107163 scopus 로고    scopus 로고
    • Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver
    • Mar 9 Epub;doi: 10.1101/gr.088773.108
    • Brunner AL, Johnson DS, Kim SW, Valouev A, Reddy TE, et al. (2009) Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver. Genome Res: Mar 9 Epub;doi: 10.1101/gr.088773.108.
    • (2009) Genome Res
    • Brunner, A.L.1    Johnson, D.S.2    Kim, S.W.3    Valouev, A.4    Reddy, T.E.5
  • 35
    • 61449428482 scopus 로고    scopus 로고
    • Differential methylation hybridization: Profiling DNA methylation with a high-density CpG island microarray
    • Yan PS, Potter D, Deatherage DE, Huang TH, Lin S (2009) Differential methylation hybridization: profiling DNA methylation with a high-density CpG island microarray. Methods Mol Biol 507: 89-106.
    • (2009) Methods Mol Biol , vol.507 , pp. 89-106
    • Yan, P.S.1    Potter, D.2    Deatherage, D.E.3    Huang, T.H.4    Lin, S.5
  • 36
    • 41649121741 scopus 로고    scopus 로고
    • Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells
    • Komashko VM, Acevedo LG, Squazzo SL, Iyengar SS, Rabinovich A, et al. (2008) Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells. Genome Res 18: 521-532.
    • (2008) Genome Res , vol.18 , pp. 521-532
    • Komashko, V.M.1    Acevedo, L.G.2    Squazzo, S.L.3    Iyengar, S.S.4    Rabinovich, A.5
  • 37
    • 60149091656 scopus 로고    scopus 로고
    • ChIP-seq accurately predicts tissue-specific activity of enhancers
    • Visel A, Blow MJ, Li Z, Zhang T, Akiyama JA, et al. (2009) ChIP-seq accurately predicts tissue-specific activity of enhancers. Nature 457: 854-858.
    • (2009) Nature , vol.457 , pp. 854-858
    • Visel, A.1    Blow, M.J.2    Li, Z.3    Zhang, T.4    Akiyama, J.A.5
  • 38
    • 54549085771 scopus 로고    scopus 로고
    • Soy protein isolate reduces hepatosteatosis in yellow Avy/a mice without altering coat color phenotype
    • Badger TM, Ronis MJ, Wolff G, Stanley S, Ferguson M, et al. (2008) Soy protein isolate reduces hepatosteatosis in yellow Avy/a mice without altering coat color phenotype. Exp Biol Med (Maywood) 233: 1242-1254.
    • (2008) Exp Biol Med (Maywood) , vol.233 , pp. 1242-1254
    • Badger, T.M.1    Ronis, M.J.2    Wolff, G.3    Stanley, S.4    Ferguson, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.