Phylogeography of the common ragworm Hediste diversicolor (Polychaeta: Nereididae) reveals cryptic diversity and multiple colonization events across its distribution

Molecular Ecology

Volumn 18, Issue 9, 2009, Pages 1980-1994

  Virgilio, M ^a,b   Fauvelot, C ^c,d   Costantini, F ^c   Abbiati, M ^c   Backeljau, T ^a,e  

^a ROYAL BELGIAN INSTITUTE OF NATURAL SCIENCES   (Belgium)

^b ROYAL MUSEUM FOR CENTRAL AFRICA   (Belgium)

^c UNIVERSITY OF BOLOGNA   (Italy)

^d UNIVERSITÉ DE PERPIGNAN   (France)

^e UNIVERSITY OF ANTWERP   (Belgium)

Author keywords

Baltic Sea; Cryptic speciation; Hediste diversicolor; MtDNA; Phylogeography

Indexed keywords

HEDISTE DIVERSICOLOR; NEREIDIDAE; POLYCHAETA;

MITOCHONDRIAL DNA;

ANIMAL; ARTICLE; BAYES THEOREM; DNA SEQUENCE; GENETICS; GEOGRAPHY; MOLECULAR EVOLUTION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYCHAETA; POPULATION GENETICS; SEQUENCE ALIGNMENT; SPECIES DIFFERENCE;

ANIMALS; BASE SEQUENCE; BAYES THEOREM; DNA, MITOCHONDRIAL; EVOLUTION, MOLECULAR; GENETICS, POPULATION; GEOGRAPHY; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYCHAETA; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

EID: 65549105375     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2009.04170.x     Document Type: Article

References (64)

1. Abbiati M, Maltagliati F (1996) Allozyme evidence of genetic differentiation between populations of Hediste diversicolor (Polychaeta: Nereididae) from the western Mediterranean. Journal of the Marine Biological Association of the United Kingdom, 76, 637 647. (Pubitemid 26324478)
2. Ait Alla A, Gillet P, Deutsch B, Moukrim A, Bergayou H (2006) Response of Nereis diversicolor (Polychaeta, Nereidae) populations to reduced wastewater discharge in the polluted estuary of Oued Souss, Bay of Agadir, Morocco. Estuarine, Coastal and Shelf Science, 70, 633 642.
3. Artegiani A, Gacic M, Michelato A et al 1993) The Adriatic Sea hydrography and circulation in spring and autumn (1985-87). Deep-Sea Research, 40, 1143 1180. (Pubitemid 24430414)
4. Audzijonyte A, Daneliya ME, Väinölä R (2006) Comparative phylogeography of Ponto-Caspian mysid crustaceans: isolation and exchange among dynamic inland sea basins. Molecular Ecology, 15, 2969 2984. (Pubitemid 44215467)
5. Audzijonyte A, Ovcarenko I, Bastrop R, Väinölä R (2008) Two cryptic species of the Hediste diversicolor group (Polychaeta, Nereididae) in the Baltic Sea, with mitochondrial signatures of different population histories. Marine Biology, 155, 599 612.
6. Avise JC, Walker D (1999) Species realities and numbers in sexual vertebrates: perspectives from an asexually transmitted genome. Proceedings of the National Academy of Sciences, USA, 96, 992 995. (Pubitemid 29072171)
7. Bakken T, Wilson RS (2005) Phylogeny of nereidids (Polychaeta, Nereididae) with paragnaths. Zoologica Scripta, 34, 507 547. (Pubitemid 41765254)
8. Bartels-Hardege HD, Zeeck E (1990) Reproductive behaviour of Nereis diversicolor (Anellida: Polychaeta). Marine Biology, 106, 409 412. (Pubitemid 20325061)
9. Bastrop R, Jurss K, Sturmbauer C (1998) Cryptic species in marine polychaete and their independent introduction from North America to Europe. Molecular Biology and Evolution, 15, 97 103. (Pubitemid 28078409)
10. Breton S, Dufresne F, Desrosiers G, Blier PU (2003) Population structure of two northern hemisphere polychaetes, Neanthes virens and Hediste diversicolor (Nereididae), with different life-history traits. Marine Biology, 142, 707 715. (Pubitemid 36704445)
11. Burlinson FC, Lawrence AJ (2007) A comparison of acute and chronic toxicity tests used to examine the temporal stability of a gradient in copper tolerance of Hediste diversicolor from the Fal estuary, Cornwall, UK. Marine Pollution Bulletin, 54, 66 71. (Pubitemid 46108007)
12. Chevaldonné P, Jollivet D, Desbruyères D, Lutz RA, Vrijenhoek RC (2002) Sister-species of eastern Pacific hydrothermal vent worms (Ampharetidae, Alvinellidae, Vestimentifera) provide new mitochondrial COI clock calibration. Cahiers de Biologie Marine, 43, 367 370. (Pubitemid 36035975)
13. Cristescu MEA, Hebert PDN, Onciu TM (2003) Phylogeography of Ponto-Caspian crustaceans: a benthic-planktonic comparison. Molecular Ecology, 12, 985 996. (Pubitemid 36524291)
14. Cuny P, Miralles G, Cornet-Barthaux V, Acquaviva M, Stora G, Grossi V, Gilbert F (2007) Influence of bioturbation by the polychaete Nereis diversicolor on the structure of bacterial communities in oil contaminated coastal sediments. Marine Pollution Bulletin, 54, 452 459. (Pubitemid 46527671)
15. Dahlgren TG, Lundberg J, Pleijel F, Sundberg P (2000) Morphological and molecular evidence of the phylogeny of Nereidiform polychaetes (Annelida). Journal of Zoological Systematics and Evolutionary Research, 38, 249 253. (Pubitemid 32106358)
16. Durou C, Smith BD, Romeo M et al 2007) From biomarkers to population responses in Nereis diversicolor: assessment of stress in estuarine ecosystems. Ecotoxicology and Environmental Safety, 66, 402 411. (Pubitemid 46204891)
17. Excoffier L, Laval LG, Schneider S (2005) Arlequin: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online, 1, 47 50.
18. Fong PP, Garthwaite RL (1994) Allozyme electrophoretic analysis of the Hediste limnicola - H. diversicolor - H. japonica species complex (Polychaeta: Nereididae). Marine Biology, 118, 463 470. (Pubitemid 2068754)
19. Gambi MC, Castelli A, Giangrande A, Lanera P, Prevedelli D, Zunarelli VR (1994) Polychaetes of commercial and applied interest in Italy: an overview. Mémoires du Muséum National d'Histoire Naturelle (France) Nouvelle Serie. Serie A. Zoologie, 162, 593 601.
20. Gamenick I, Abbiati M, Giere O (1998) Field distribution and sulphide tolerance of Capitella capitata (Annelida: Polychaeta) around shallow water hydrothermal vents off Milos (Aegean Sea). A new sibling species? Marine Biology, 130, 447 453. (Pubitemid 28126661)
21. Grigorovich IA, Therriault TW, MacIsaac HJ (2003) History of aquatic invertebrate invasions in the Caspian Sea. Biological Invasions, 5, 103 115. (Pubitemid 36872718)
22. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41, 95 98.
23. Hasegawa M, Kishino H, Yano T (1985) Dating the human-ape split by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution, 22, 160 174. (Pubitemid 16227864)
24. Hateley JG, Grant A, Taylor SM, Neville J (1992) Morphological and other evidence on the degree of genetic differentiation between populations of Nereis diversicolor. Journal of the Marine Biological Association of the United Kingdom, 72, 365 381. (Pubitemid 23398466)
25. Huelsenbeck JP, Ronquist F (2001) MrBayes: Bayesian inference of phylogeny. Bioinformatics, 17, 754 755.
26. Huson DH, Bryant D (2006) Application of phylogenetic networks to evolutionary studies. Molecular Biology and Evolution, 23, 254 267. (Pubitemid 43100040)
27. Jolly MT, Jollivet D, Gentil F, Thiébaut E, Viard F (2005) Sharp genetic break between Atlantic and English Channel populations of the polychaete Pectinaria koreni, along the North coast of France. Heredity, 94, 23 32. (Pubitemid 40020164)
28. Knowlton N (1993) Sibling species in the sea. Annual Review of Ecology and Systematics, 24, 189 216. (Pubitemid 2013411)
29. Kojima S, Segawa R, Hashimoto J, Ohta S (1997) Molecular phylogeny of vestimentiferans collected around Japan, revealed by the nucleotide sequences of mitochondrial DNA. Marine Biology, 127, 507 513. (Pubitemid 27111775)
30. Kotlík P, Marková S, Choleva L, Bogutskaya NG, Ekmekçi FG, Ivanova PP (2008) Divergence with gene flow between Ponto-Caspian refugia in an anadromous cyprinid Rutilus frisii revealed by multiple gene phylogeography. Molecular Ecology, 17, 1076 1088.
31. Ladoukakis ED, Saavedra C, Magoulas A, Zouros E (2002) Mitochondrial DNA variation in a species with two mitochondrial genomes: the case of Mytilus galloprovincialis from the Atlantic, the Mediterranean and the Black Sea. Molecular Ecology, 11, 755 769. (Pubitemid 34443728)
32. Lefebure T, Douady CJ, Gouy M, Gibert J (2006) Relationship between morphological taxonomy and molecular divergence within Crustacea: proposal of a molecular threshold to help species delimitation. Molecular Phylogenetics and Evolution, 40, 435 447. (Pubitemid 44038589)
33. Lejeusne C, Chevaldonné P (2006) Brooding crustaceans in a highly fragmented habitat: the genetic structure of Mediterranean marine cave-dwelling mysid populations. Molecular Ecology, 15, 4123 4140. (Pubitemid 44607156)
34. Luttikhuizen PC, Drent J, Baker AJ (2003) Disjunct distribution of highly diverged mitochondrial lineage clade and population subdivision in a marine bivalve with pelagic larval dispersal. Molecular Ecology, 12, 2215 2229. (Pubitemid 36922332)
35. Magoulas A, Castilho R, Caetano S, Marcato S, Patarnello T (2006) Mitochondrial DNA reveals a mosaic pattern of phylogeographical structure in Atlantic and Mediterranean populations of anchovy (Engraulis encrasicolus). Molecular Phylogenetics and Evolution, 39, 734 746. (Pubitemid 44262098)
36. Maltagliati F, Massaro L, Cossu P, Castelli A (2006) Morphological differentiation in the ragworm, Hediste diversicolor (Polychaeta, Nereididae), as revealed by variation of paragnath number and distribution. Italian Journal of Zoology, 73, 255 262. (Pubitemid 44203549)
37. Mariani S, Ketmaier V, De Matthaeis E (2002) Genetic structuring and gene flow in Cerastoderma Glaucum (Bivalvia: Cardiidae): evidence from allozyme variation at different geographic scales. Marine Biology, 140, 687 697. (Pubitemid 36064898)
38. Mayr E (1942) Systematics and the Origin of Species. Columbia University Press, New York.
39. Mishler BD, Theriot E (2000) The phylogenetic species concept sensu Mishler and Theriot: monophyly, apomorphy, and phylogenetic species concepts. In : Species Concepts and Phylogenetic Theory: A Debate (eds Wheeler QD, Meier E pp. 44 54. Columbia University Press, New York.
40. Moritz C, Cicero C (2004) DNA barcoding: promise and pitfalls. Public Library of Science, Biology, 2, e354. (Pubitemid 39532912)
41. Nylander JAA (2004) MrModeltest version 2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.
42. Olive PJW (1994) Polychaeta as a world resource: a review of patterns of exploitation as sea angling baits and the potential for aquaculture based production. Mémoires du Muséum National d'Histoire Naturelle (France) Nouvelle Serie. Serie A. Zoologie, 162, 603 610.
43. Patarnello T, Volckaert F, Castilho R (2007) Pillars of Hercules: is the Atlantic-Mediterranean transition a phylogeographical break? Molecular Ecology, 16, 4426 4444. (Pubitemid 47620514)
44. Peijnenburg KTCA, Breeuwer JAJ, Pierrot-Bults AC, Menken SBJ (2004) Phylogeography of the planktonic chaetognath Sagitta setosa reveals isolation in European seas. Evolution, 58, 1472 1487. (Pubitemid 39033468)
45. Peijnenburg KTCA, Fauvelot C, Breeuwer JAJ, Menken SBJ (2006) Spatial and temporal genetic structure of the planktonic Sagitta setosa (Chaetognatha) in European seas as revealed by mitochondrial and nuclear DNA markers. Molecular Ecology, 15, 3319 3338. (Pubitemid 44379735)
46. Reusch TBH, Stam WT, Olsen JL (2000) A microsatellite-based estimation of clonal diversity and population subdivision in Zostera marina, a marine flowering plant. Molecular Ecology, 9, 127 140. (Pubitemid 30121377)
47. Rohner M, Bastrop R, Jurss K (1997) Genetic differentiation in Hediste diversicolor (Polychaeta: Nereididae) for the North Sea and the Baltic Sea. Marine Biology, 130, 171 180. (Pubitemid 28084447)
48. Rozas J, Sanchez-Del Barrio JC, Messeguer X, Rozas R (2003) DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics, 19, 2496 2497. (Pubitemid 38016658)
49. Sato M, Masuda Y (1997) Genetic differentiation in two sibling species of the brackish-water polychaete Hediste japonica complex (Nereididae). Marine Biology, 130, 163 170. (Pubitemid 28088534)
50. Sato M, Nakashima A (2003) A review of Asian Hediste species complex (Nereididae, Polychaeta) with descriptions of two new species and a redescription of Hediste japonica (Izuka, 1908). Zoological Journal of the Linnean Society, 137, 403 445. (Pubitemid 36364071)
51. Scaps P (2002) A review of the biology, ecology and potential use of the common ragworm Hediste diversicolor (O.F. Müller) (Annelida: Polychaeta). Hydrobiologia, 470, 203 218. (Pubitemid 34689253)
52. Schneider S, Excoffier L (1999) Estimation of past demographic parameters from the distribution of pairwise distances when the mutation rates vary among sites: application to human mitochondrial DNA. Genetics, 152, 1079 1089. (Pubitemid 29330907)
53. Smith RI (1977) Physiological and reproductive adaptations of Nereis diversicolor to life in Baltic and adjacent waters. In : Essays on Polychaetous Annelids (eds Reish DJ, Fauchald K pp. 373 390. University of Southern California Press, Los Angeles, California.
54. Sun F, Zhou Q (2008) Oxidative stress biomarkers of the polychaete Nereis diversicolor exposed to cadmium and petroleum hydrocarbons. Ecotoxicology and Environmental Safety, 70, 106 114.
55. Tajima F (1989) Statistical methods to test for nucleotide mutation hypothesis by DNA polymorphism. Genetics, 123, 585 595. (Pubitemid 19274682)
56. Tamura K, Dudley J, Nei M, Kumar S (2007) mega 4: Molecular Evolutionary Genetics Analysis (mega) software version 4.0. Molecular Biology and Evolution, 24, 1596 1599. (Pubitemid 47236692)
57. Tavaré S (1986) Some probabilistic and statistical problems in the analysis of DNA sequences. In : Some Mathematical Questions in Biology - DNA Sequence Analysis (ed. Miura RM pp. 57 86. American Mathematic Society, Providence, Rhode Island.
58. Virgilio M, Abbiati M (2004) Habitat discontinuity and genetic structure in populations of the estuarine species Hediste diversicolor (Polychaeta: Nereididae). Estuarine, Coastal and Shelf Science, 61, 361 367. (Pubitemid 39218898)
59. Virgilio M, Abbiati M (2006) Temporal changes in the genetic structure of intertidal populations of Hediste diversicolor (Polychaeta: Nereididae). Journal of Sea Research, 56, 53 58. (Pubitemid 43963463)
60. Virgilio M, Backeljau T, Abbiati M (2006) Mitochondrial DNA and allozyme patterns of Hediste diversicolor (Polychaeta: Nereididae): the importance of small scale genetic structuring. Marine Ecology Progress Series, 326, 157 165. (Pubitemid 46026132)
61. Virgilio M, Maci S, Abbiati M (2005) Comparisons of genotype-tolerance responses in populations of Hediste diversicolor (Polychaeta: Nereididae) exposed to copper stress. Marine Biology, 147, 1305 1312.
62. Westheide H-C (2001) Molecular taxonomy: description of a cryptic Petitia species (Polychaeta: Syllidae) from the island of Mahé (Seychelles, Indian Ocean) using RAPD markers and ITS2 sequences. Journal of Zoological Systematics and Evolutionary Research, 39, 103 111. (Pubitemid 32320034)
63. Wiklund H, Nygren A, Pleijel F, Sundberg P (2005) Phylogeny of Aphroditiformia (Polychaeta) based on molecular and morphological data. Molecular Phylogenetics and Evolution, 37, 494 502. (Pubitemid 41434035)
64. Winnepenninckx B, Backeljau T, De Wachter R (1993) Extraction of high molecular weight DNA from molluscs. Trends in Genetics, 9, 407. (Pubitemid 223004092)