Timing of the functional diversification of α- And β-adrenoceptors in fish and other vertebrates

Annals of the New York Academy of Sciences

Volumn 1163, Issue , 2009, Pages 343-347

  Aris Brosou, S ^a,b   Chen, X ^a   Perry, S F ^a   Moon, T W ^a,b  

^a UNIVERSITY OF OTTAWA   (Canada)

^b UNIVERSITY OF OTTAWA   (Canada)

Author keywords

Adrenoceptors; Evolution; G protein coupled receptors; Genome duplication; Phylogeny; Vertebrates

Indexed keywords

ALPHA ADRENERGIC RECEPTOR; BETA ADRENERGIC RECEPTOR;

AMINO ACID SEQUENCE; CONFERENCE PAPER; CONTROLLED STUDY; FISH; GENE DUPLICATION; GENE LOSS; GENETIC VARIABILITY; NONHUMAN; PHYLOGENY; PROTEIN ANALYSIS; VERTEBRATE;

MAMMALIA; VERTEBRATA;

EID: 65449155155     PISSN: 00778923     EISSN: 17496632     Source Type: Book Series    
DOI: 10.1111/j.1749-6632.2009.04451.x     Document Type: Conference Paper

References (22)

1. Chen, X. et al. 2007. Characterization and functional divergence of the α 1-adrenoceptor gene family: insights from rainbow trout (Oncorhynchus mykiss). Physiol. Genomics 32 : 142 153.
2. Lortie, M.B. T.W. Moon. 2003. The rainbow trout skeletal muscle β-adrenergic system: characterization and signaling. Am. J. Physiol. Regul. Integr. Comp. Physiol. 284 : R689 R697. (Pubitemid 36342802)
3. Nickerson, J.G. et al. 2003. Activity of the unique β-adrenergic Na+/H +exchanger in trout erythrocytes is controlled by a novel β3-AR subtype. Am. J. Physiol. Regul. Integr. Comp. Physiol. 285 : R526 R535.
4. Jordan, I.K. et al. 2002. Essential genes are more evolutionarily conserved than are nonessential genes in bacteria. Genome Res. 12 : 962 968. (Pubitemid 34662289)
5. Edgar, R.C. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32 : 1792 1797. (Pubitemid 38832724)
6. Suyama, M., D. Torrents P. Bork. 2006. PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments. Nucleic Acids Res. 34 : W609 W612. (Pubitemid 44529842)
7. Posada, D. K.A. Crandall. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14 : 817 818. (Pubitemid 28552116)
8. Drummond, A.J. A. Rambaut. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7 : 214.
9. Drummond, A.J. et al. 2006. Relaxed phylogenetics and dating with confidence. PLoS Biol. 4 : e88. (Pubitemid 43748216)
10. Hedges, S.B., J. Dudley S. Kumar. 2006. TimeTree: a public knowledge-base of divergence times among organisms. Bioinformatics 22 : 2971 2972.
11. Aris-Brosou, S. X. Xia. 2008. Phylogenetic analyses: a toolbox expanding towards Bayesian methods. Int. J. Plant Genomics 2008 : 683509.
12. Furlong, R.F. P.W. Holland. 2002. Were vertebrates octoploid? Philos. Trans. R. Soc. Lond. B. Biol. Sci. 357 : 531 544. (Pubitemid 34494815)
13. Taylor, J.S. et al. 2001. Comparative genomics provides evidence for an ancient genome duplication event in fish. Philos. Trans. R. Soc. Lond. B. Biol. Sci. 356 : 1661 1679. (Pubitemid 32996721)
14. Blair, J.E. S.B. Hedges. 2005. Molecular phylogeny and divergence times of deuterostome animals. Mol. Biol. Evol. 22 : 2275 2284. (Pubitemid 41437808)
15. Putnam, N.H. et al. 2008. The amphioxus genome and the evolution of the chordate karyotype. Nature 453 : 1064 1071.
16. Vandepoele, K. et al. 2004. Major events in the genome evolution of vertebrates: paranome age and size differ considerably between ray-finned fishes and land vertebrates. Proc. Natl. Acad. Sci. USA 101 : 1638 1643. (Pubitemid 38234207)
17. Paterson, A.H., J.E. Bowers B.A. Chapman. 2004. Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics. Proc. Natl. Acad. Sci. USA 101 : 9903 9908. (Pubitemid 38869334)
18. David, L. et al. 2003. Recent duplication of the common carp (Cyprinus carpio L.) genome as revealed by analyses of microsatellite loci. Mol. Biol. Evol. 20 : 1425 1434. (Pubitemid 37082578)
19. Martin, A.P. T.M. Burg. 2002. Perils of paralogy: using HSP70 genes for inferring organismal phylogenies. Syst. Biol. 51 : 570 587. (Pubitemid 35180689)
20. Yang, Z. 2007. PAML 4: phylogenetic analysis by maximum likelihood. Mol. Biol. Evol. 24 : 1586 1591. (Pubitemid 47236688)
21. Bury, N.R. A. Sturm. 2007. Evolution of the corticosteroid receptor signalling pathway in fish. Gen. Comp. Endocrinol. 153 : 47 56.
22. Huising, M.O., C.P. Kruiswijk G. Flik. 2006. Phylogeny and evolution of class-I helical cytokines. J. Endocrinol. 189 : 1 25. (Pubitemid 43670697)