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Volumn 10, Issue SUPPL. 4, 2009, Pages

Using tree diversity to compare phylogenetic heuristics

Author keywords

[No Author keywords available]

Indexed keywords

ENTROPY-BASED METHODS; EVOLUTIONARY HISTORY; EVOLUTIONARY TREE; MAXIMUM PARSIMONY; PERFORMANCE MEASURE; ROBINSON-FOULDS DISTANCE; SEARCH ALGORITHMS; TREE DIVERSITY;

EID: 65449148286     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-10-S4-S3     Document Type: Conference Paper
Times cited : (14)

References (17)
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    • Metzker ML Mindell DP Liu XM Ptak RG Gibbs RA Hillis DM Molecular evidence of HIV-1 transmission in a criminal case PNAS 2002, 99(2):14292-14297. 137877 12388776
    • (2002) PNAS , vol.99 , Issue.2 , pp. 14292-14297
    • Metzker, M.L.1    Mindell, D.P.2    Liu, X.M.3    Ptak, R.G.4    Gibbs, R.A.5    Hillis, D.M.6
  • 3
    • 0033504552 scopus 로고    scopus 로고
    • The parsimony ratchet, a new method for rapid parsimony analysis
    • Nixon KC The parsimony ratchet, a new method for rapid parsimony analysis Cladistics 1999, 15:407-414
    • (1999) Cladistics , vol.15 , pp. 407-414
    • Nixon, K.C.1
  • 7
    • 0033499153 scopus 로고    scopus 로고
    • Analyzing large data sets in reasonable times: Solutions for composite optima
    • Goloboff P Analyzing large data sets in reasonable times: Solutions for composite optima Cladistics 1999, 15:415-428
    • (1999) Cladistics , vol.15 , pp. 415-428
    • Goloboff, P.1
  • 8
    • 0039348203 scopus 로고
    • Comparison of weighted labelled trees
    • Lecture Notes in Mathematics, Springer-Verlag
    • Robinson D Foulds L Comparison of weighted labelled trees Proc Sixth Austral Conf Lecture Notes in Mathematics, Springer-Verlag 1979, 748:119-126
    • (1979) Proc Sixth Austral Conf , vol.748 , pp. 119-126
    • Robinson, D.1    Foulds, L.2
  • 9
    • 0032746022 scopus 로고    scopus 로고
    • Disk-covering, a fast-converging method for phylogenetic tree reconstruction
    • 10582573
    • Huson D Nettles S Warnow T Disk-covering, a fast-converging method for phylogenetic tree reconstruction Journal of Computational Biology 1999, 6:369-386. 10582573
    • (1999) Journal of Computational Biology , vol.6 , pp. 369-386
    • Huson, D.1    Nettles, S.2    Warnow, T.3
  • 12
    • 33750484812 scopus 로고    scopus 로고
    • An evaluation of ensign wasp classification (Hymenoptera: Evanildae) based on molecular data and insights from ribosomal RNA secondary structure
    • Deans AR Gillespie JJ Yoder MJ An evaluation of ensign wasp classification (Hymenoptera: Evanildae) based on molecular data and insights from ribosomal RNA secondary structure Syst Ento 2006, 31:517-528
    • (2006) Syst Ento , vol.31 , pp. 517-528
    • Deans, A.R.1    Gillespie, J.J.2    Yoder, M.J.3
  • 13
    • 33645263708 scopus 로고    scopus 로고
    • Assessing the odd secondary structural properties of nuclear small subunit ribosomal RNA sequences (18S) of the twisted-wing parasites (Insecta: Strepsiptera)
    • 16313563
    • Gillespie JJ McKenna CH Yoder MJ Gutell RR Johnston JS Kathirithamby J Cognato AI Assessing the odd secondary structural properties of nuclear small subunit ribosomal RNA sequences (18S) of the twisted-wing parasites (Insecta: Strepsiptera) Insect Mol Biol 2005, 14:625-643. 16313563
    • (2005) Insect Mol Biol , vol.14 , pp. 625-643
    • Gillespie, J.J.1    McKenna, C.H.2    Yoder, M.J.3    Gutell, R.R.4    Johnston, J.S.5    Kathirithamby, J.6    Cognato, A.I.7
  • 14
    • 0031224822 scopus 로고    scopus 로고
    • Analyzing large datasets: rbcL 500 revisited
    • 11975333
    • Rice K Donoghue M Olmstead R Analyzing large datasets: RbcL 500 revisited Systematic Biology 1997, 46(3):554-563. 11975333
    • (1997) Systematic Biology , vol.46 , Issue.3 , pp. 554-563
    • Rice, K.1    Donoghue, M.2    Olmstead, R.3
  • 17
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    • Efficiently Computing Arbitrarily-Sized Robinson-Foulds Distance Matrices
    • Lecture Notes in Computer Science, Springer-Verlag
    • Sul SJ Brammer G Williams TL Efficiently Computing Arbitrarily-Sized Robinson-Foulds Distance Matrices Workshop on Algorithms in Bioinformatics (WABI'08) Lecture Notes in Computer Science, Springer-Verlag 2008, 5251:123-134
    • (2008) Workshop on Algorithms in Bioinformatics (WABI'08) , vol.5251 , pp. 123-134
    • Sul, S.J.1    Brammer, G.2    Williams, T.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.