Roles and interactions of begomoviruses and satellite DNAs associated with okra leaf curl disease in Mali, West Africa

Journal of General Virology

Volumn 90, Issue 4, 2009, Pages 1001-1013

  Kon, Tatsuya ^a   Rojas, Maria R ^a   Abdourhamane, Issoufou K ^b   Gilbertson, Robert L ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b AVRDC West Africa Office   (Mali)

Author keywords

[No Author keywords available]

Indexed keywords

HELICASE; SATELLITE DNA; VIRUS DNA;

AFRICA; ARTICLE; BEGOMOVIRUS; DISEASE SEVERITY; DNA SEQUENCE; GENE FUNCTION; GENE INTERACTION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; OKRA; OKRA LEAF CURL DISEASE; OKRA VIRUS 1; OKRA VIRUS 2; PLANT LEAF; PLANT MICROORGANISM INTERACTION; PLANT VIRUS; PRIORITY JOURNAL; VIRAL GENETICS; VIRAL PLANT DISEASE; VIRUS ISOLATION; VIRUS REPLICATION; COTTON; GENETICS; ISOLATION AND PURIFICATION; MALI; MOLECULAR GENETICS; PATHOGENICITY; PHYLOGENY; PHYSIOLOGY; PLANT DISEASE; TOBACCO; TOMATO; VIROLOGY;

ABELMOSCHUS; ABELMOSCHUS ESCULENTUS; BEGOMOVIRUS; COTTON LEAF CURL GEZIRA VIRUS; GOSSYPIUM HIRSUTUM; LYCOPERSICON ESCULENTUM; NICOTIANA BENTHAMIANA;

ABELMOSCHUS; BEGOMOVIRUS; CLONING, MOLECULAR; DNA, SATELLITE; DNA, VIRAL; GOSSYPIUM; LYCOPERSICON ESCULENTUM; MALI; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT DISEASES; PLANT LEAVES; SEQUENCE ANALYSIS, DNA; TOBACCO;

EID: 64949168152     PISSN: 00221317     EISSN: 14652099     Source Type: Journal    
DOI: 10.1099/vir.0.008102-0     Document Type: Article

References (43)

1. Argüello-Astorga, G. R. & Ruiz-Medrano, R. (2001). An iteron-related domain is associated to Motif 1 in the replication proteins of geminiviruses: Identification of potential interacting amino acid-base pairs by a comparative approach. Arch Virol 146, 1465-1485.
2. Bigarre, L., Chazly, M., Salah, M., Ibrahim, M., Padidam, M., Nicole, M., Peterschmitt, M., Fauquet, C. & Thouvenel, J. C. (2001). Characterization of a new begomovirus from Egypt infecting hollyhock (Althea rosea). Eur J Plant Pathol 107, 701-711.
3. Briddon, R. W. & Markham, P. G. (1994). Universal primers for the PCR amplification of dicot-infecting geminiviruses. Mol Biotechnol 1, 202-205.
4. Briddon, R. W. & Stanley, J. (2006). Subviral agents associated with plant single-stranded DNA viruses. Virology 344, 198-210.
5. Briddon, R. W., Bull, S. E., Mansoor, S., Amin, I. & Markham, P. G. (2002). Universal primers for the PCR-mediated amplification of DNAβ. Mol Biotechnol 20, 315-318.
6. Briddon, R.W., Bull, S. E., Amin, I., Mansoor, S., Bedford, I. D., Rishi, N., Siwatch, S. S., Zafar, Y., Abedel-Salam, A.M. & Markham, P. G. (2004). Diversity of DNA1: A satellite-like molecule associated withmonopartite begomovirus-DNAβ complexes. Virology 324, 462-474.
7. Briddon, R. W., Brown, J. K., Moriones, E., Stanley, J., Zerbini, M., Zhou, X. & Fauquet, C. M. (2008). Recommendation for the classification and nomenclature of the DNAβ satellites of begomoviruses. Arch Virol 153, 763-781.
8. Bull, S. E., Briddon, R. W. & Markham, P. G. (2003). Universal primers for the PCR-mediated amplification of DNA1: A satellite-like molecule associated with begomovirus-DNAβ complexes. Mol Biotechnol 23, 83-86.
9. Chen, H., Nelson, R. S. & Sherwood, J. L. (1994). Enhanced recovery of transformants of Agrobacterium tumefaciens after freeze-thaw transformation and drug selection. Biotechniques 16, 664-670.
10. Cui, X., Li, G., Wang, D., Hu, D. & Zhou, X. (2005). A begomovirus DNAβ-encoded protein binds DNA, functions as a suppressor of RNA silencing, and targets the cell nucleus. J Virol 79, 10764-10775.
11. De La Torre-Almaraz, R., Monsalvo-Reyes, A., Romero-Rodriguez, A., Argüello-Astorga, G. R. & Ambriz-Granados, S. (2006). A new begomovirus inducing yellow mottle in okra crops in Mexico is related to Sida yellow vein virus. Plant Dis 90, 378.
12. Fauquet, C. M., Sawyer, S., Idris, A. M. & Brown, J. K. (2005). Sequence analysis and classification of apparent recombinant begomoviruses infecting tomato in the Nile and Mediterranean basins. Phytopathology 95, 549-555.
13. Fauquet, C. M., Briddon, R. W., Brown, J. K., Moriones, E., Stanley, J., Zerbini, M. & Zhou, X. (2008). Geminivirus strain demarcation and nomenclature. Arch Virol 153, 783-821.
14. Gilbertson, R. L., Faria, J. C., Hanson, S. F., Morales, F. J., Ahlquist, P. G., Maxwell, D. P. & Russell, D. R. (1991). Cloning of the complete DNA genomes of four bean-infecting geminiviruses and determining their infectivity by electric discharge particle acceleration. Phytopathology 81, 980-985.
15. Hagen, C., Rojas, M. R., Sudarshana, M. R., Xoconostle-Cazares, B., Natwick, E. T., Turini, T. A. & Gilbertson, R. L. (2008). Biology and molecular characterization of Cucurbit leaf crumple virus, an emergent cucurbit-infecting begomovirus in the Imperial Valley of California. Plant Dis 92, 781-793.
16. Hajdukiewicz, P., Svab, Z. & Maliga, P. (1994). The small, versatile pPZP family of Agrobacterium binary vectors for plant transformation. Plant Mol Biol 25, 989-994.
17. Hou, Y.-M. & Gilbertson, R. L. (1996). Increased pathogenicity in a pseudorecombinant bipartite geminivirus correlates with intermolecular recombination. J Virol 70, 5430-5436.
18. Idris, A. M. & Brown, J. K. (2002). Molecular analysis of Cotton leaf curl virus-Sudan reveals an evolutionary history of recombination. Virus Genes 24, 249-256.
19. Idris, A. M. & Brown, J. K. (2005). Evidence for interspecific-recombination for three monopartite begomoviral genomes associated with the tomato leaf curl disease from central Sudan. Arch Virol 150, 1003-1012.
20. Idris, A. M., Briddon, R. W., Bull, S. E. & Brown, J. K. (2005). Cotton leaf curl Gezira virus-satellite DNAs represent a divergent, geographically isolated Nile Basin lineage: Predictive identification of a satDNA REP-binding motif. Virus Res 109, 19-32.
21. Jose, J. & Usha, R. (2003). Bhendi yellow vein mosaic disease in India is caused by association of a DNAβ satellite with a begomovirus. Virology 305, 310-317.
22. Kon, T., Dolores, L. M., Murayama, A., Bajet, N. B., Hase, S., Takahashi, H. & Ikegami, M. (2002). Genome organization of an infectious clone of Tomato leaf curl virus (Philippines), a new monopartite Begomovirus. J Phytopathol 150, 587-591.
23. Kon, T., Dolores, L. M., Bajet, N. B., Hase, S., Takahashi, H. & Ikegami, M. (2003). Molecular characterization of a strain of Squash leaf curl China virus from the Philippines. J Phytopathol 151, 535-539.
24. Kon, T., Sharma, P. & Ikegami, M. (2007). Suppressor of RNA silencing encoded by the monopartite tomato leaf curl Java begomovirus. Arch Virol 152, 1273-1282.
25. Lefeuvre, P., Martin, D. P., Hoareau, M., Naze, F., Delatte, H., Thierry, M., Varsani, A., Becker, N., Reynaud, B. & Lett, J. M. (2007). Begomovirus "melting pot" in the South West Indian Ocean Islands: Molecular diversity and evolution through recombination. J Gen Virol 88, 3458-3468.
26. Lin, B., Akbar Behjatnia, S. A., Dry, I. B., Randles, J. W. & Rezaian, M. A. (2003). High-affinity Rep-binding is not required for the replication of a geminivirus DNA and its satellite. Virology 305, 353-363.
27. Mansoor, S., Khan, S. H., Bashir, A., Saeed, M., Zafar, Y., Malik, K. A., Briddon, R., Stanley, J. & Markham, P. G. (1999). Identification of a novel circular single-stranded DNA associated with cotton leaf curl disease in Pakistan. Virology 259, 190-199.
28. Mansoor, S., Briddon, R. W., Bull, S. E., Bedford, I. D., Bashir, A., Hussain, M., Saeed, M., Zafar, Y., Malik, K. A. & other authors (2003). Cotton leaf curl disease is associated with multiple monopartite begomoviruses supported by single DNAβ. Arch Virol 148, 1969-1986.
29. Mansoor, S., Zafar, Y. & Briddon, R. W. (2006). Geminivirus disease complexes: The threat is spreading. Trends Plant Sci 11, 209-212.
30. Rojas, M. R., Gilbertson, R. L., Russell, D. R. & Maxwell, D. P. (1993). Use of degenerate primers in the polymerase chain reaction to detect whitefly-transmitted geminiviruses. Plant Dis 77, 340-347.
31. Rojas, M. R., Hagen, C., Lucas, W. J. & Gilbertson, R. L. (2005). Exploiting chinks in the plant's armor: Evolution and emergence of geminiviruses. Annu Rev Phytopathol 43, 361-394.
32. Saeed, M. (2008). Limitations observed in the use of agroinoculation for geminivirus research. Virus Genes 37, 434-435.
33. Saeed, M., Zafar, Y., Randles, J. W. & Rezaian, M. A. (2007). A monopartite begomovirus-associated DNAβ satellite substitutes for the DNA B of a bipartite begomovirus to permit systemic infection. J Gen Virol 88, 2881-2889.
34. Salati, R., Nahkla, M. K., Rojas, M. R., Guzman, P., Jaquez, J., Maxwell, D. P. & Gilbertson, R. L. (2002). Tomato yellow leaf curl virus in the Dominican Republic: Characterization of an infectious clone, virus monitoring in whiteflies, and identification of reservoir hosts. Phytopathology 92, 487-496.
35. Saunders, K. & Stanley, J. (1999). A nanovirus-like DNA component associated with yellow vein disease of Ageratum conyzoides: Evidence for interfamilial recombination between plant DNA viruses. Virology 264, 142-152.
36. Saunders, K., Bedford, I. D., Briddon, R. W., Markham, P. G., Wong, S. M. & Stanley, J. (2000). A novel virus complex causes Ageratum yellow vein disease. Proc Natl Acad Sci U S A 97, 6890-6895.
37. Saunders, K., Bedford, I. D. & Stanley, J. (2002). Adaptation from whitefly to leafhopper transmission of an autonomously replicating nanovirus-like DNA component associated with ageratum yellow vein disease. J Gen Virol 83, 907-913.
38. Seal, S. E., Jeger, M. J. & Van den Bosch, F. (2006). Begomovirus evolution and disease management. Adv Virus Res 67, 297-316.
39. Seo, Y.-S., Zhou, Y.-C., Turini, T. A., Cook, C. G., Gilbertson, R. L. & Natwick, E. T. (2006). Evaluation of cotton germ plasm for resistance to the whitefly and cotton leaf crumple (CLCr) disease and etiology of CLCr in California's Imperial Valley. Plant Dis 90, 877-884.
40. Shih, S. L., Green, S. K., Tsai, W. S., Lee, L. M. & Levasseur, V. (2006). First report of a distinct begomovirus associated with okra yellow crinkle disease in Mali. Plant Pathol 56, 718.
41. Varma, A. & Malathi, V. G. (2003). Emerging geminivirus problems: A serious threat to crop production. Ann Appl Biol 142, 145-164.
42. Zhou, X., Liu, Y., Robinson, D. J. & Harrison, B. D. (1998). Four DNA-A variants among Pakistani isolates of cotton leaf curl virus and their affinities to DNA-A of geminivirus isolates from okra. J Gen Virol 79, 915-923.
43. Zhou, Y.-C., Noussourou, M., Kon, T., Rojas, M. R., Jiang, H., Chen, L.-F., Gamby, K., Foster, R. & Gilbertson, R. L. (2008). Evidence of local evolution of tomato-infecting begomovirus species in West Africa: Characterization of tomato leaf curl Mali virus and tomato yellow leaf crumple virus from Mali. Arch Virol 153, 693-706.