Diffusion in narrow domains and application to phototransduction

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 79, Issue 3, 2009, Pages

  Reingruber, Jürgen ^a   Holcman, David ^a,b  

^a ECOLE NORMALE SUPÉRIEURE   (France)

^b WEIZMANN INSTITUTE OF SCIENCE   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVATED ENZYMES; BIOPHYSICAL PARAMETERS; BROWNIAN PARTICLES; CELLULAR BIOLOGIES; CELLULAR MICROSTRUCTURES; CURRENT ESTIMATIONS; KEY PARAMETERS; LARGE CLASS; MICRO-DOMAINS; OUTER SEGMENTS; PHOSPHODIESTERASE; PHOTORESPONSE; PHOTOTRANSDUCTION; ROD PHOTORECEPTORS; SMALL TARGETS; SYNAPTIC CLEFTS;

AIRCRAFT ENGINES; CYTOLOGY; ELEMENTARY PARTICLE SOURCES; PARTIAL DIFFERENTIAL EQUATIONS; RATE CONSTANTS; SYNTHESIS (CHEMICAL);

GRAFTING (CHEMICAL);

EID: 64549148902     PISSN: 15393755     EISSN: 15502376     Source Type: Journal    
DOI: 10.1103/PhysRevE.79.030904     Document Type: Article

References (34)

1. R. Zwanzig, Proc. Natl. Acad. Sci. U.S.A. 87, 5856 (1990). 10.1073/pnas.87.15.5856
2. H. C. Berg and M. Purcell, Biophys. J. 20, 193 (1977). 10.1016/S0006-3495(77)85544-6
3. G. Wilemski and M. Fixman, J. Chem. Phys. 58, 4009 (1973). 10.1063/1.1679757
4. M. Ward and J. Keller, SIAM J. Appl. Math. 53, 770 (1993). 10.1137/0153038
5. M. Ward and E. Van De Velde, IMA J. Appl. Math. 48, 53 (1992). 10.1093/imamat/48.1.53
6. I. V. Grigoriev, Y. A. Makhnovskii, A. M. Berezhkovskii, and V. Y. Zitserman, J. Chem. Phys. 116, 9574 (2002). 10.1063/1.1475756
7. D. Holcman and Z. Schuss, J. Stat. Phys. 117, 975 (2004). 10.1007/s10955-004-5712-8
8. Z. Schuss, A. Singer, and D. Holcman, Proc. Natl. Acad. Sci. U.S.A. 104, 16098 (2007). 10.1073/pnas.0706599104
9. D. Holcman and Z. Schuss, J. Phys. A 41, 155001 (2008). 10.1088/1751-8113/41/15/155001
10. A. Singer and Z. Schuss, Phys. Rev. E 74, 020103 (R) (2006). 10.1103/PhysRevE.74.020103
11. A. Taflia and D. Holcman, J. Chem. Phys. 126, 234107 (2007). 10.1063/1.2746840
12. J. Bourne and K. Harris, Annu. Rev. Neurosci. 31, 47 (2008). 10.1146/annurev.neuro.31.060407.125646
13. K. Klenin, W. Kusnezow, and J. Langowski, J. Chem. Phys. 122, 214715 (2005). 10.1063/1.1927510
14. Z. Schuss, Theory and Applications of Stochastic Differential Equations, Wiley Series in Probability and Statistics (Wiley, New York, 1980).
15. Handbook of Mathematical Functions, edited by, M. Abramowitz, and, I. A. Stegun, (Dover, New York, 1964).
16. M. Ward, W. Heshaw, and J. Keller, SIAM J. Appl. Math. 53, 799 (1993). 10.1137/0153039
17. A. Singer, Z. Schuss, D. Holcman, and B. Eisenberg, J. Stat. Phys. 122, 465 (2006). 10.1007/s10955-005-8027-5
18. R. Straube, M. Ward, and M. Falcke, J. Stat. Phys. 129, 377 (2007). 10.1007/s10955-007-9371-4
19. A. Singer, Z. Schuss, D. Holcman, and B. Eisenberg, J. Stat. Phys. 122, 437 (2006). 10.1007/s10955-005-8026-6
20. E. Pugh, Jr. and T. Lamb, Handbook Biological Physics (Elsevier Science B.V., Amsterdam, 2000), Vol. 3, pp. 183-225.
21. M. Burns and V. Arshavsky, Neuron 48, 387 (2005). 10.1016/j.neuron.2005. 10.014
22. E. Pugh, Jr. and T. Lamb, Biochim. Biophys. Acta 1141, 111 (1993). 10.1016/0005-2728(93)90038-H
23. Y. Koutalos, K. Nakatani, and K.-W. Yau, Biophys. J. 68, 373 (1995). 10.1016/S0006-3495(95)80198-0
24. A. Olson and E. Pugh, Jr., Biophys. J. 65, 1335 (1993). 10.1016/S0006-3495(93)81177-9
25. E. Pugh, Jr. and T. Lamb, J. Physiol. (London) 449, 719 (1992).
26. K. R. Naqvi, Chem. Phys. Lett. 28, 280 (1974). 10.1016/0009-2614(74) 80073-4
27. D. C. Torney and H. M. McConnell, Proc. R. Soc. London, Ser. A 387, 147 (1983). 10.1098/rspa.1983.0055
28. I. Leskov, V. Klenchin, J. Handy, G. Whitlock, V. Govardovskii, M. Bownds, T. Lamb, E. Pugh, Jr., and V. Arshavsky, Neuron 27, 525 (2000). 10.1016/S0896-6273(00)00063-5
29. V. Arshavsky, T. Lamb, and E. Pugh, Jr., Annu. Rev. Physiol. 64, 153 (2002). 10.1146/annurev.physiol.64.082701.102229
30. F. Rieke and D. Baylor, Biophys. J. 71, 2553 (1996). 10.1016/S0006- 3495(96)79448-1
31. R. Hamer, S. Nicholas, D. Tranchina, T. Lamb, and J. Jarvinen, Visual Neurosci. 22, 417 (2005).
32. D. Holcman and J. Korenbrot, J. Gen. Physiol. 125, 641 (2005). 10.1085/jgp.200509277
33. Y. Fu, V. Kefalov, D. Luo, T. Xue, and K. Yau, Nat. Neurosci. 11, 565 (2008). 10.1038/nn.2110
34. P. Bisegna, G. Caruso, D. Andreucci, L. Shen, V. Gurevich, H. Hamm, and E. DiBenedetto, Biophys. J. 94, 3363 (2008). 10.1529/biophysj.107.114058