High chloroplast haplotype diversity in Greek populations of beech (Fagus sylvatica L.)

Plant Biology

Volumn 11, Issue 3, 2009, Pages 425-433

  Hatziskakis, S ^a   Papageorgiou, A C ^a   Gailing, O ^b   Finkeldey, R ^b  

^a DEMOCRITUS UNIVERSITY OF THRACE   (Greece)

^b UNIVERSITY OF GÖTTINGEN   (Germany)

Author keywords

Beech; CpDNA; Greece; Refugia; Variation

Indexed keywords

CHLOROPLAST DNA; MICROSATELLITE DNA;

CHLOROPLAST; COMPARATIVE STUDY; DECIDUOUS TREE; GENETIC MARKER; GENETIC VARIATION; INTROGRESSION; SPECIES DIVERSITY;

ARTICLE; BEECH; ECOSYSTEM; GENETIC VARIABILITY; GENETICS; GREECE; HAPLOTYPE; PHYLOGENY; POPULATION GENETICS;

DNA, CHLOROPLAST; ECOSYSTEM; FAGUS; GENETIC VARIATION; GENETICS, POPULATION; GREECE; HAPLOTYPES; MICROSATELLITE REPEATS; PHYLOGENY;

FAGUS; FAGUS SYLVATICA;

EID: 64349095568     PISSN: 14358603     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1438-8677.2008.00111.x     Document Type: Article

References (33)

1. Clement M., Posada D., Krandall K.A. (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657 1659.
2. Comps B., Gömöry D., Letouzey J., Thiebaut B., Petit R.J. (2001) Diverging trends between heterozygosity and allelic richness during post-glacial colonization in the European beech. Genetics, 157, 389 397.
3. Demesure B., Comps B., Petit R.J. (1996) Chloroplast DNA phylogeography of the common beech (Fagus sylvatica L.) in Europe. Evolution, 50, 2515 2520.
4. Excoffier L., Smouse P.E., Quattro J.M. (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131, 479 491.
5. Filipova-Marinova M. (1995) The late Quaternary history of the genus Fagus L. in Bulgaria. In : Bozilova E., Tonkov S. (Eds Advances in Holocene Paleoecology in Bulgaria. Pensoft Publishers, Sophia : 84 95.
6. Gailing O., von Wuehlisch G. (2004) Nuclear markers (AFLPs) and chloroplast microsatellites differ between Fagus sylvatica and Fagus orientalis. Silvae Genetica, 53, 105 110.
7. Hewitt G.M. (1996) Some genetic consequences of ice ages and their role in divergence and speciation. Biological Journal of the Linnean Society, 58, 247 276.
8. Hewitt G.M. (2000) The genetic legacy of Quaternary ice ages. Nature, 405, 907 913.
9. Huntley B., Birks H.J. (1983) An Atlas of Past and Present Pollen Maps for Europe, 0-13000 Years Ago. Cambridge University Press, Cambridge.
10. Huntley B., Bartlein P.J., Prentice I.C. (1989) Climatic control of the distribution and abundance of beech (Fagus sylvatica L.) in Europe and North America. Journal of Biogeography, 16, 551 560.
11. King R.A., Ferris C. (1998) Chloroplast DNA phylogeography of Alnus glutinosa. Molecular Ecology, 7, 1151 1161.
12. Magri D., Vendramin G.G., Comps B., Dupanloup I., Geburek T., Gömöry D., Latalowa M., Litt T., Paule L., Roure J.M., Tantau I., Knaap W.O., Petit R.J., Beaulieu J.L. (2006) A new scenario for the Quaternary history of European beech populations: paleobotanical evidence and genetic consequences. New Phytologist, 171, 199 221.
13. Mantel N. (1967) The detection of disease clustering and a generalized regression approach. Cancer Research, 27, 209 220.
14. McCauley D.E., Raveill J., Antonovics J. (1995) Local founding events as determinants of genetic structure in a plant metapopulation. Heredity, 75, 630 636.
15. Miller M.P. (1997) Tools for Population Genetic Analyses (TFPGA) 1.3: A Windows Program for the Analysis of Allozyme and Molecular Population Genetic Data. Computer software distributed by author.
16. Nei M. (1972) Genetic distance between populations. American Naturalist, 106, 283 292.
17. Papageorgiou A.C., Vidalis A., Gailing O., Tsiripidis I., Hatziskakis S., Boutsios S., Galatsidas S., Finkeldey R. (2007) Genetic variation of beech (Fagus sylvatica L.) in Rodopi (N.E. Greece). European Journal of Forest Research, 127, 81 88.
18. Petit R.J., El Mousadik A., Pons O. (1998) Identifying populations for conservation on the basis of genetic markers. Conservation Biology, 12, 844 855.
19. Petit R.J., Brewer S., Bordács S., Burg K., Cheddadi R., Coart E., Cottrell J., Csaikl U.M., van Dam B., Deans J.D., Espinel S., Fineschi S., Finkeldey R., Glaz I., Goicoechea P.G., Jensen J.S., König A.O., Lowe A.J., Madsen S.F., Mátyás G., Munro R.C., Popescu F., Slade D., Tabbener H., de Vries S.G.M., Ziegenhagen B., de Beaulieu J.L., Kremer A. (2002) Identification of refugia and post-glacial colonization routes of European white oaks based on chloroplast DNA and fossil pollen evidence. Forest Ecology and Management, 156, 49 74.
20. Petit R.J., Aguinagalde I., Beaulieu J.L., Bittkau C., Brewer S., Cheddadi R., Ennos R., Fineschi S., Grivet D., Lascoux M., Mohanty A., Müller-Stark G., Demesure-Musch B., Palme A., Martin J.P., Rendell S., Vendramin G.G. (2003) Glacial refugia: hotspots but not melting pots of genetic diversity. Science, 300, 1563 1565.
21. Pons O., Petit R.J. (1995) Estimation, variance and optimal sampling of gene diversity. I. Haploid locus. Theoretical & Applied Genetics, 90, 462 470.
22. Pons O., Petit R.J. (1996) Measuring and testing genetic differentiation with ordered versus unordered alleles. Genetics, 144, 1237 1245.
23. Pott R. (1997) Invasion of beech and establishment of beech forests in Europe. Annali di Botanica, 55, 27 57.
24. Schaal B.A., Hayworth D.A., Olsen K.M., Rauscher J.T., Smith W.A. (1998) Phylogeographic studies in plants: problems and prospects. Molecular Ecology, 7, 465 474.
25. Schneider S., Roessli D., Excofier L. (2000) Arlequin: A Software for Population Genetics Data Analysis. Ver 2.000. Genetics and Biometry Lab, Deptartment. of Anthropology, University of Geneva, Geneva.
26. Slatkin M. (1995) A measure of population subdivision based on microsatellite allele frequencies. Genetics, 139, 457 462.
27. Sokal R. (1979) Testing statistical significance of geographic variation patterns. Systematic Zoology, 28, 227 232.
28. Sokal R., Rolph F.J. (1995) Biometry, 3rd edn. W.H. Freeman and Co., New York.
29. Taberlet P., Fumangalli L., Wust-Sausy A., Cosson J. (1998) Comparative phylogeography and post-glacial colonization routes in Europe. Molecular Ecology, 7, 453 464.
30. Tsiripidis I., Athanasiadis N. (2003) Contribution to the knowledge of the vascular flora of NE Greece: floristic composition of the beech (Fagus sylvatica L.) forests in the Greek Rodopi. Willdeniwia, 33, 273 298.
31. Tsiripidis I., Bergmeier E., Dimopoulos P. (2007) Spatial and ecological differentiation in Fagus forest vegetation of Greece. Journal of Vegetation Science, 18, 743 750.
32. Vettori C., Vendramin G.G., Anzidei M., Pastorelli R., Paffetti D., Giannini R. (2004) Geographic distribution of chloroplast variation in Italian populations of beech (Fagus sylvatica L.). Theoretical and Applied Genetics, 109, 1 9.
33. Weising K., Gardner R.C. (1999) A set of conserved PCR primers for the analysis of simple sequence repeat polymorphisms in chloroplast genomes of dicotyledonous angiosperms. Genome, 42, 9 19.