-
1
-
-
0000154034
-
Architectural elements in nucleoprotein complexes
-
Crothers, D. M. (1993) Architectural elements in nucleoprotein complexes. Curr. Biol. 3, 675-676.
-
(1993)
Curr. Biol
, vol.3
, pp. 675-676
-
-
Crothers, D.M.1
-
2
-
-
0028226799
-
DNA chaperones: A solution to a persistence problem
-
Travers, A. A., Ner, S. S., and Churchill, M. E. A. (1994) DNA chaperones: A solution to a persistence problem. Cell 77, 167-169.
-
(1994)
Cell
, vol.77
, pp. 167-169
-
-
Travers, A.A.1
Ner, S.S.2
Churchill, M.E.A.3
-
3
-
-
0035281548
-
HMG1 and 2, and related 'architectural' DNA-binding proteins
-
Thomas, J. O., and Travers, A. A. (2001) HMG1 and 2, and related 'architectural' DNA-binding proteins. Trends Biochem. Sci. 26, 167-174.
-
(2001)
Trends Biochem. Sci
, vol.26
, pp. 167-174
-
-
Thomas, J.O.1
Travers, A.A.2
-
4
-
-
0033522480
-
Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non-sequence-specific binding
-
Allain, F. H., Yen, Y. M., Masse, J. E., Schultze, P., Dieckmann, T., Johnson, R. C., and Feigon, J. (1999) Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non-sequence-specific binding. EMBO J. 18, 2563-2579.
-
(1999)
EMBO J
, vol.18
, pp. 2563-2579
-
-
Allain, F.H.1
Yen, Y.M.2
Masse, J.E.3
Schultze, P.4
Dieckmann, T.5
Johnson, R.C.6
Feigon, J.7
-
5
-
-
0036404246
-
The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding
-
Masse, J. E., Wong, B., Yen, Y. M., Allain, F. H., Johnson, R. C., and Feigon, J. (2002) The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding. J. Mol. Biol. 323, 263-284.
-
(2002)
J. Mol. Biol
, vol.323
, pp. 263-284
-
-
Masse, J.E.1
Wong, B.2
Yen, Y.M.3
Allain, F.H.4
Johnson, R.C.5
Feigon, J.6
-
6
-
-
0029825332
-
Yeast HMG proteins NHP6A/B potentiate promoter-specific transcriptional activation in vivo and assembly of preinitiation complexes in vitro
-
Paull, T. T., Carey, M., and Johnson, R. C. (1996) Yeast HMG proteins NHP6A/B potentiate promoter-specific transcriptional activation in vivo and assembly of preinitiation complexes in vitro. Genes Dev. 10, 2769-2781.
-
(1996)
Genes Dev
, vol.10
, pp. 2769-2781
-
-
Paull, T.T.1
Carey, M.2
Johnson, R.C.3
-
7
-
-
0028970118
-
DNA looping by Saccharomyces cerevisiae high mobility group proteins NHP6A/ B
-
Paull, T. T., and Johnson, R. C. (1995) DNA looping by Saccharomyces cerevisiae high mobility group proteins NHP6A/ B. J. Biol. Chem. 270, 8744-8754.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 8744-8754
-
-
Paull, T.T.1
Johnson, R.C.2
-
8
-
-
0032548929
-
Determinants of DNA binding and bending by the Saccharomyces cerevisiae high mobility group protein NHP6A that are important for its biological activities. Role of the unique N terminus and putative intercalating methionine
-
Yen, Y. M., Wong, B., and Johnson, R. C. (1998) Determinants of DNA binding and bending by the Saccharomyces cerevisiae high mobility group protein NHP6A that are important for its biological activities. Role of the unique N terminus and putative intercalating methionine. J. Biol. Chem. 273, 4424-4435.
-
(1998)
J. Biol. Chem
, vol.273
, pp. 4424-4435
-
-
Yen, Y.M.1
Wong, B.2
Johnson, R.C.3
-
9
-
-
0028950413
-
HMG-D is an architecture-specific protein that preferentially binds to DNA containing the dinucleotide TG
-
Churchill, M. E., Jones, D. N., Glaser, T., Hefner, H., Searles, M. A., and Travers, A. A. (1995) HMG-D is an architecture-specific protein that preferentially binds to DNA containing the dinucleotide TG EMBO J. 14, 1264-1275.
-
(1995)
EMBO J
, vol.14
, pp. 1264-1275
-
-
Churchill, M.E.1
Jones, D.N.2
Glaser, T.3
Hefner, H.4
Searles, M.A.5
Travers, A.A.6
-
10
-
-
0037592865
-
The role of intercalating residues in chromosomal high-mobility-group protein DNA binding, bending and specificity
-
Klass, J., Murphy, F. V. t., Fouts, S., Serenil, M., Changela, A., Siple, J., and Churchill, M. E. (2003) The role of intercalating residues in chromosomal high-mobility-group protein DNA binding, bending and specificity. Nucleic Acids Res. 31, 2852-2864.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 2852-2864
-
-
Klass, J.1
Murphy, F.V.T.2
Fouts, S.3
Serenil, M.4
Changela, A.5
Siple, J.6
Churchill, M.E.7
-
11
-
-
0024584528
-
Specific recognition of cruciform DNA by nuclear protein HMG1
-
Bianchi, M. E., Beltrame, M., and Paonessa, G. (1989) Specific recognition of cruciform DNA by nuclear protein HMG1. Science 243, 1056-1059.
-
(1989)
Science
, vol.243
, pp. 1056-1059
-
-
Bianchi, M.E.1
Beltrame, M.2
Paonessa, G.3
-
12
-
-
0027216519
-
The nonspecific DNA-binding and -bending proteins HMG1 and HMG2 promote the assembly of complex nucleoprotein structures
-
Paull, T. T., Haykinson, M. J., and Johnson, R. C. (1993) The nonspecific DNA-binding and -bending proteins HMG1 and HMG2 promote the assembly of complex nucleoprotein structures. Genes Dev. 7, 1521-1534.
-
(1993)
Genes Dev
, vol.7
, pp. 1521-1534
-
-
Paull, T.T.1
Haykinson, M.J.2
Johnson, R.C.3
-
13
-
-
0027359690
-
High-mobility-group 1 protein mediates DNA bending as determined by ring closure
-
Pil, P. M., Chow, C. S., and Lippard, S. J. (1993) High-mobility-group 1 protein mediates DNA bending as determined by ring closure. Proc. Natl. Acad. Sci. U.S.A. 90, 9465-9469.
-
(1993)
Proc. Natl. Acad. Sci. U.S.A
, vol.90
, pp. 9465-9469
-
-
Pil, P.M.1
Chow, C.S.2
Lippard, S.J.3
-
14
-
-
0027414641
-
Structure of the HMG box motif in the B-domain of HMG1
-
Weir, H. M., Kraulis, P. J., Hill, C. S., Raine, A. R. C., Laue, E. D., and Thomas, J. O. (1993) Structure of the HMG box motif in the B-domain of HMG1. EMBO J. 12, 1311-1319.
-
(1993)
EMBO J
, vol.12
, pp. 1311-1319
-
-
Weir, H.M.1
Kraulis, P.J.2
Hill, C.S.3
Raine, A.R.C.4
Laue, E.D.5
Thomas, J.O.6
-
15
-
-
0033022040
-
Architectural regulations and Hmg1
-
Wolffe, A. P. (1999) Architectural regulations and Hmg1. Nat. Genet. 22, 215-217.
-
(1999)
Nat. Genet
, vol.22
, pp. 215-217
-
-
Wolffe, A.P.1
-
16
-
-
11244293527
-
The Saccharomyces cerevisiae high mobility group box protein HMO1 contains two functional DNA binding domains
-
Kamau, E., Bauerle, K. T, and Grove, A. (2004) The Saccharomyces cerevisiae high mobility group box protein HMO1 contains two functional DNA binding domains. J. Biol. Chem. 279, 55234-55240.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 55234-55240
-
-
Kamau, E.1
Bauerle, K.T.2
Grove, A.3
-
17
-
-
0032079906
-
DNA-binding properties of the tandem HMG boxes of high-mobility-group protein 1 (HMG1)
-
Grasser, K. D., Teo, S. H., Lee, K. B., Broadhurst, R. W., Rees, C., Hardman, C. H., and Thomas, J. O. (1998) DNA-binding properties of the tandem HMG boxes of high-mobility-group protein 1 (HMG1). Eur. J. Biochem. 253, 787-795.
-
(1998)
Eur. J. Biochem
, vol.253
, pp. 787-795
-
-
Grasser, K.D.1
Teo, S.H.2
Lee, K.B.3
Broadhurst, R.W.4
Rees, C.5
Hardman, C.H.6
Thomas, J.O.7
-
18
-
-
46349084382
-
Transient HMGB protein interactions with B-DNA duplexes and complexes
-
Zimmerman, J., and Maher, L. J., III. (2008) Transient HMGB protein interactions with B-DNA duplexes and complexes. Biochem. Biophys. Res. Commun. 371, 79-84.
-
(2008)
Biochem. Biophys. Res. Commun
, vol.371
, pp. 79-84
-
-
Zimmerman, J.1
Maher III, L.J.2
-
19
-
-
0034727674
-
Intercalating residues determine the mode of HMG1 domains A and B binding to cisplatin-modified DNA
-
He, Q., Ohndorf, U. M., and Lippard, S. J. (2000) Intercalating residues determine the mode of HMG1 domains A and B binding to cisplatin-modified DNA. Biochemistry 39, 14426-14435.
-
(2000)
Biochemistry
, vol.39
, pp. 14426-14435
-
-
He, Q.1
Ohndorf, U.M.2
Lippard, S.J.3
-
20
-
-
0037432325
-
Nature of full-length HMGB1 binding to cisplatin-modified DNA
-
Jung, Y., and Lippard, S. J. (2003) Nature of full-length HMGB1 binding to cisplatin-modified DNA. Biochemistry 42, 2664-2671.
-
(2003)
Biochemistry
, vol.42
, pp. 2664-2671
-
-
Jung, Y.1
Lippard, S.J.2
-
21
-
-
0033578010
-
Basis for recognition of cisplatin-modified DNA by high-mobility-group proteins
-
Ohndorf, U. M, Rould, M. A., He, Q., Pabo, C. O., and Lippard, S. J. (1999) Basis for recognition of cisplatin-modified DNA by high-mobility-group proteins. Nature 399, 708-712.
-
(1999)
Nature
, vol.399
, pp. 708-712
-
-
Ohndorf, U.M.1
Rould, M.A.2
He, Q.3
Pabo, C.O.4
Lippard, S.J.5
-
22
-
-
0028805743
-
Crystal structure of double-stranded DNA containing the major adduct of the anticancer drug cisplatin
-
Takahara, P. M., Rosenzweig, A. C., Frederick, C. A., and Lippard, S. J. (1995) Crystal structure of double-stranded DNA containing the major adduct of the anticancer drug cisplatin. Nature 377, 649-652.
-
(1995)
Nature
, vol.377
, pp. 649-652
-
-
Takahara, P.M.1
Rosenzweig, A.C.2
Frederick, C.A.3
Lippard, S.J.4
-
23
-
-
0033064093
-
Interactions of high mobility group box proteins with DNA and chromatin
-
Churchill, M. E., Changela, A., Dow, L. K., and Krieg, A. J. (1999) Interactions of high mobility group box proteins with DNA and chromatin. Methods Enzymol. 304, 99-133.
-
(1999)
Methods Enzymol
, vol.304
, pp. 99-133
-
-
Churchill, M.E.1
Changela, A.2
Dow, L.K.3
Krieg, A.J.4
-
24
-
-
1342324028
-
IHF and HU: Flexible architects of bent DNA
-
Swinger, K. K., and Rice, P. A. (2004) IHF and HU: Flexible architects of bent DNA. Curr. Opin. Struct. Biol. 14, 28-35.
-
(2004)
Curr. Opin. Struct. Biol
, vol.14
, pp. 28-35
-
-
Swinger, K.K.1
Rice, P.A.2
-
25
-
-
0041312645
-
Flexible DNA bending in HU-DNA cocrystal structures
-
Swinger, K. K., Lemberg, K. M., Zhang, Y., and Rice, P. A. (2003) Flexible DNA bending in HU-DNA cocrystal structures. EMBO J. 22, 3749-3760.
-
(2003)
EMBO J
, vol.22
, pp. 3749-3760
-
-
Swinger, K.K.1
Lemberg, K.M.2
Zhang, Y.3
Rice, P.A.4
-
26
-
-
2342454974
-
Dual architectural roles of HU: Formation of flexible hinges and rigid filaments
-
Van Noort, J., Verbrugge, S., Goosen, N., Dekker, C., and Dame, R. T. (2004) Dual architectural roles of HU: Formation of flexible hinges and rigid filaments. Proc. Natl. Acad. Sci. U.S.A. 101, 6969-6974.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A
, vol.101
, pp. 6969-6974
-
-
Van Noort, J.1
Verbrugge, S.2
Goosen, N.3
Dekker, C.4
Dame, R.T.5
-
27
-
-
62549160054
-
Mechanism of DNA flexibility enhancement by HMGB proteins
-
in press
-
Zhang, J., McCauley, M. J., Maher, L. J., III, Williams, M. C., and Israeloff, N. E. (2009) Mechanism of DNA flexibility enhancement by HMGB proteins, Nucleic Acids Res. (in press)
-
(2009)
Nucleic Acids Res
-
-
Zhang, J.1
McCauley, M.J.2
Maher III, L.J.3
Williams, M.C.4
Israeloff, N.E.5
-
28
-
-
35748980855
-
HMGB binding to DNA: Single and double box motifs
-
McCauley, M. J., Zimmerman, J., Maher, L. J., III, and Williams, M. C. (2007) HMGB binding to DNA: Single and double box motifs. J. Mol. Biol. 374, 993-1004.
-
(2007)
J. Mol. Biol
, vol.374
, pp. 993-1004
-
-
McCauley, M.J.1
Zimmerman, J.2
Maher III, L.J.3
Williams, M.C.4
-
29
-
-
23244443772
-
Dual binding modes for an HMG domain from human HMGB2 on DNA
-
McCauley, M., Hardwidge, P. R., Maher, L. J., III, and Williams, M. C. (2005) Dual binding modes for an HMG domain from human HMGB2 on DNA. Biophys. J. 89, 353-364.
-
(2005)
Biophys. J
, vol.89
, pp. 353-364
-
-
McCauley, M.1
Hardwidge, P.R.2
Maher III, L.J.3
Williams, M.C.4
-
30
-
-
0032520175
-
High mobility group protein-1 (HMG-1) is a unique activator of p53
-
Jayaraman, L., Moorthy, N. C., Murthy, K. G., Manley, J. L., Bustin, M., and Prives, C. (1998) High mobility group protein-1 (HMG-1) is a unique activator of p53. Genes Dev. 12, 462-472.
-
(1998)
Genes Dev
, vol.12
, pp. 462-472
-
-
Jayaraman, L.1
Moorthy, N.C.2
Murthy, K.G.3
Manley, J.L.4
Bustin, M.5
Prives, C.6
-
31
-
-
0033052037
-
The lack of chromosomal protein HMG1 does not disrupt cell growth but causes lethal hypoglycaemia in newborn mice
-
Calogero, S., Grassi, F., Aguzzi, A., Voigtlander, T., Ferrier, P., Ferrari, S., and Bianchi, M. E. (1999) The lack of chromosomal protein HMG1 does not disrupt cell growth but causes lethal hypoglycaemia in newborn mice. Nat. Genet. 22, 276-280.
-
(1999)
Nat. Genet
, vol.22
, pp. 276-280
-
-
Calogero, S.1
Grassi, F.2
Aguzzi, A.3
Voigtlander, T.4
Ferrier, P.5
Ferrari, S.6
Bianchi, M.E.7
-
32
-
-
0034081137
-
Mechanism for specificity by HMG-1 in enhanceosome assembly
-
Ellwood, K. B., Yen, Y. M., Johnson, R. C., and Carey, M. (2000) Mechanism for specificity by HMG-1 in enhanceosome assembly. Mol. Cell. Biol. 20, 4359-4370.
-
(2000)
Mol. Cell. Biol
, vol.20
, pp. 4359-4370
-
-
Ellwood, K.B.1
Yen, Y.M.2
Johnson, R.C.3
Carey, M.4
-
33
-
-
0036258393
-
The DNA architectural protein HMGB1 displays two distinct modes of action that promote enhanceosome assembly
-
Mitsouras, K., Wong, B., Arayata, C., Johnson, R. C., and Carey, M. (2002) The DNA architectural protein HMGB1 displays two distinct modes of action that promote enhanceosome assembly. Mol. Cell. Biol. 22, 4390-4401.
-
(2002)
Mol. Cell. Biol
, vol.22
, pp. 4390-4401
-
-
Mitsouras, K.1
Wong, B.2
Arayata, C.3
Johnson, R.C.4
Carey, M.5
-
34
-
-
0032484098
-
Requirement of RSF and FACT for transcription of chromatin templates in vitro
-
LeRoy, G., Orphanides, G., Lane, W. S., and Reinberg, D. (1998) Requirement of RSF and FACT for transcription of chromatin templates in vitro. Science 282, 1900-1904.
-
(1998)
Science
, vol.282
, pp. 1900-1904
-
-
LeRoy, G.1
Orphanides, G.2
Lane, W.S.3
Reinberg, D.4
-
35
-
-
0030473893
-
Characterization of a high mobility group 1/2 homolog in yeast
-
Lu, J., Kobayashi, R., and Brill, S. J. (1996) Characterization of a high mobility group 1/2 homolog in yeast. J. Biol. Chem. 271, 33678-33685.
-
(1996)
J. Biol. Chem
, vol.271
, pp. 33678-33685
-
-
Lu, J.1
Kobayashi, R.2
Brill, S.J.3
-
36
-
-
0037295617
-
Priming the nucleosome: A role for HMGB proteins?
-
4
-
Travers, A. A. (2003) Priming the nucleosome: A role for HMGB proteins? EMBO Rep. 4, 131-136.
-
(2003)
EMBO Rep
, pp. 131-136
-
-
Travers, A.A.1
-
37
-
-
0034708330
-
DNA constraints on transcription activation in vitro
-
Ross, E. D., Keating, A. M., and Maher, L. J., III. (2000) DNA constraints on transcription activation in vitro. J. Mol. Biol. 297, 321-334.
-
(2000)
J. Mol. Biol
, vol.297
, pp. 321-334
-
-
Ross, E.D.1
Keating, A.M.2
Maher III, L.J.3
-
38
-
-
0034815596
-
HMG proteins and DNA flexibility in transcription activation
-
Ross, E. D., Hardwidge, P. R., and Maher, L. J., III. (2001) HMG proteins and DNA flexibility in transcription activation. Mol. Cell. Biol. 21, 6598-6605.
-
(2001)
Mol. Cell. Biol
, vol.21
, pp. 6598-6605
-
-
Ross, E.D.1
Hardwidge, P.R.2
Maher III, L.J.3
-
39
-
-
0024300816
-
Physical properties of DNA in vivo as probed by the length dependence of the lac operator looping process
-
Bellomy, G., Mossing, M., and Record, M. (1988) Physical properties of DNA in vivo as probed by the length dependence of the lac operator looping process. Biochemistry 27, 3900-3906.
-
(1988)
Biochemistry
, vol.27
, pp. 3900-3906
-
-
Bellomy, G.1
Mossing, M.2
Record, M.3
-
40
-
-
0027510369
-
In vivo thermodynamic analysis of repression with and without looping in lac constructs. Estimates of free and local lac repressor concentrations and of physical properties of a region of supercoiled plasmid DNA in vivo
-
Law, S. M., Bellomy, G. R., Schlax, P. J., and Record, M. T., Jr. (1993) In vivo thermodynamic analysis of repression with and without looping in lac constructs. Estimates of free and local lac repressor concentrations and of physical properties of a region of supercoiled plasmid DNA in vivo. J. Mol. Biol. 230, 161-173.
-
(1993)
J. Mol. Biol
, vol.230
, pp. 161-173
-
-
Law, S.M.1
Bellomy, G.R.2
Schlax, P.J.3
Record Jr., M.T.4
-
41
-
-
0022529619
-
Upstream operators enhance repression of the lac promoter
-
Mossing, M. C., and Record, M. T, Jr. (1986) Upstream operators enhance repression of the lac promoter. Science 233, 889-892.
-
(1986)
Science
, vol.233
, pp. 889-892
-
-
Mossing, M.C.1
Record Jr., M.T.2
-
42
-
-
2142855754
-
DNA supercoiling changes the spacing requirements of two lac operators for DNA loop formation with lac repressor
-
Kramer, H., Amouyal, M., Nordheim, A., and Müller-Hill, B. (1988) DNA supercoiling changes the spacing requirements of two lac operators for DNA loop formation with lac repressor. EMBO J. 7, 547-556.
-
(1988)
EMBO J
, vol.7
, pp. 547-556
-
-
Kramer, H.1
Amouyal, M.2
Nordheim, A.3
Müller-Hill, B.4
-
43
-
-
0023333893
-
lac repressor forms loops with linear DNA carrying two suitably spaced lac operators
-
Kramer, H., Niemoller, M., Amouyal, M., Revet, B., von Wilcken-Bergmann, B., and Müller-Hill, B. (1987) lac repressor forms loops with linear DNA carrying two suitably spaced lac operators. EMBO J. 6, 1481-1491.
-
(1987)
EMBO J
, vol.6
, pp. 1481-1491
-
-
Kramer, H.1
Niemoller, M.2
Amouyal, M.3
Revet, B.4
von Wilcken-Bergmann, B.5
Müller-Hill, B.6
-
44
-
-
0029975889
-
Repression of lac promoter as a function of distance, phase and quality of an auxiliary lac operator
-
Muller, J., Oehler, S., and Müller-Hill, B. (1996) Repression of lac promoter as a function of distance, phase and quality of an auxiliary lac operator. J. Mol. Biol. 257, 21-29.
-
(1996)
J. Mol. Biol
, vol.257
, pp. 21-29
-
-
Muller, J.1
Oehler, S.2
Müller-Hill, B.3
-
45
-
-
0028365289
-
Quality and position of the three lac operators of E. coli define efficiency of repression
-
Oehler, S., Amouyal, M., Kolkhof, P., von Wilcken-Bergmann, B., and Müller-Hill, B. (1994) Quality and position of the three lac operators of E. coli define efficiency of repression. EMBO J. 13, 3348-3355.
-
(1994)
EMBO J
, vol.13
, pp. 3348-3355
-
-
Oehler, S.1
Amouyal, M.2
Kolkhof, P.3
von Wilcken-Bergmann, B.4
Müller-Hill, B.5
-
46
-
-
0025343547
-
The three operators of the lac operon cooperate in repression
-
Oehler, S., Eismann, E. R., Kramer, H., and Müller-Hill, B. (1990) The three operators of the lac operon cooperate in repression. EMBO J. 9, 973-979.
-
(1990)
EMBO J
, vol.9
, pp. 973-979
-
-
Oehler, S.1
Eismann, E.R.2
Kramer, H.3
Müller-Hill, B.4
-
47
-
-
19444387811
-
Bacterial repression loops require enhanced DNA flexibility
-
Becker, N. A., Kahn, J. D., and Maher, L. J., III. (2005) Bacterial repression loops require enhanced DNA flexibility. J. Mol. Biol. 349, 716-730.
-
(2005)
J. Mol. Biol
, vol.349
, pp. 716-730
-
-
Becker, N.A.1
Kahn, J.D.2
Maher III, L.J.3
-
48
-
-
34547642985
-
Effects of nucleoid proteins on DNA repression loop formation in Escherichia coli
-
Becker, N. A., Kahn, J. D., and Maher, L. J., III. (2007) Effects of nucleoid proteins on DNA repression loop formation in Escherichia coli. Nucleic Acids Res. 35, 3988-4000.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 3988-4000
-
-
Becker, N.A.1
Kahn, J.D.2
Maher III, L.J.3
-
49
-
-
47249091433
-
Eukaryotic HMGB proteins as replacements for HU in E. coli repression loop formation
-
Becker, N. A., Kahn, J. D., and Maher, L. J., III. (2008) Eukaryotic HMGB proteins as replacements for HU in E. coli repression loop formation. Nucleic Acids Res. 36, 4009-4021.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4009-4021
-
-
Becker, N.A.1
Kahn, J.D.2
Maher III, L.J.3
-
50
-
-
4644219557
-
DNA binding and bending by HMG boxes: Energetic determinants of specificity
-
Dragan, A. I., Read, C. M., Makeyeva, E. N., Milgotina, E. I., Churchill, M. E., Crane-Robinson, C., and Privalov, P. L. (2004) DNA binding and bending by HMG boxes: Energetic determinants of specificity. J. Mol. Biol. 343, 371-393.
-
(2004)
J. Mol. Biol
, vol.343
, pp. 371-393
-
-
Dragan, A.I.1
Read, C.M.2
Makeyeva, E.N.3
Milgotina, E.I.4
Churchill, M.E.5
Crane-Robinson, C.6
Privalov, P.L.7
-
51
-
-
0032529668
-
Genetic analysis of prokaryotic and eukaryotic DNA-binding proteins in Escherichia coli
-
Whipple, F. W. (1998) Genetic analysis of prokaryotic and eukaryotic DNA-binding proteins in Escherichia coli. Nucleic Acids Res. 26, 3700-3706.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 3700-3706
-
-
Whipple, F.W.1
-
52
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko, K. A., and Wanner, B. L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. U.S.A. 97, 6640-6645.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
53
-
-
0036293430
-
Contribution of the intrinsic curvature to measured DNA persistence length
-
Vologodskaia, M., and Vologodskii, A. (2002) Contribution of the intrinsic curvature to measured DNA persistence length. J. Mol. Biol. 317, 205-213.
-
(2002)
J. Mol. Biol
, vol.317
, pp. 205-213
-
-
Vologodskaia, M.1
Vologodskii, A.2
-
54
-
-
0025272593
-
Application of the method of phage T4 DNA ligase-catalyzed ring-closure to the study of DNA structure. I. Computational analysis
-
Hagerman, P. J., and Ramadevi, V. A. (1990) Application of the method of phage T4 DNA ligase-catalyzed ring-closure to the study of DNA structure. I. Computational analysis. J. Mol. Biol. 212, 351-362.
-
(1990)
J. Mol. Biol
, vol.212
, pp. 351-362
-
-
Hagerman, P.J.1
Ramadevi, V.A.2
-
55
-
-
0035901480
-
Two mutations of basic residues within the N-terminus of HMG-1 B domain with different effects on DNA supercoiling and binding to bent DNA
-
Stros, M. (2001) Two mutations of basic residues within the N-terminus of HMG-1 B domain with different effects on DNA supercoiling and binding to bent DNA. Biochemistry 40, 4769-4779.
-
(2001)
Biochemistry
, vol.40
, pp. 4769-4779
-
-
Stros, M.1
-
56
-
-
0032570251
-
Electrostatic effects in DNA bending by GCN4 mutants
-
Strauss-Soukup, J. K., and Maher, L. J., III. (1998) Electrostatic effects in DNA bending by GCN4 mutants. Biochemistry 37, 1060-1066.
-
(1998)
Biochemistry
, vol.37
, pp. 1060-1066
-
-
Strauss-Soukup, J.K.1
Maher III, L.J.2
-
57
-
-
0037008044
-
Dominant effect of protein charge rather than protein shape in apparent DNA bending by engineered bZIP domains
-
Hardwidge, P. R., Kahn, J. D., and Maher, L. J., III. (2002) Dominant effect of protein charge rather than protein shape in apparent DNA bending by engineered bZIP domains. Biochemistry 41, 8277-8288.
-
(2002)
Biochemistry
, vol.41
, pp. 8277-8288
-
-
Hardwidge, P.R.1
Kahn, J.D.2
Maher III, L.J.3
-
58
-
-
33750204880
-
DNA bending by bHLH charge variants
-
McDonald, R. J., Kahn, J. D., and Maher, L. J., III. (2006) DNA bending by bHLH charge variants. Nucleic Acids Res. 34, 4846-4856.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 4846-4856
-
-
McDonald, R.J.1
Kahn, J.D.2
Maher III, L.J.3
-
59
-
-
33847628327
-
DNA bending by charged peptides: Electrophoretic and spectroscopic analyses
-
McDonald, R. J., Dragan, A. I., Kirk, W. R., Neff, K L., Privalov, P. L., and Maher, L. J., III. (2007) DNA bending by charged peptides: Electrophoretic and spectroscopic analyses. Biochemistry 46, 2306-2316.
-
(2007)
Biochemistry
, vol.46
, pp. 2306-2316
-
-
McDonald, R.J.1
Dragan, A.I.2
Kirk, W.R.3
Neff, K.L.4
Privalov, P.L.5
Maher III, L.J.6
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