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Volumn 47, Issue 1, 2008, Pages 47-54

Reconsideration of the phylogenetic position of Frontonia-related Peniculia (Ciliophora, Protozoa) inferred from the small subunit ribosomal RNA gene sequences

Author keywords

Ciliate; F. didieri; F. tchibisovae; Frontonia lynni; Oligohymenophorea; Phylogeny; SS rRNA

Indexed keywords

CILIOPHORA; FRONTONIA; FRONTONIA LYNNI; FRONTONIIDAE; HYMENOSTOMATIA; OLIGOHYMENOPHOREA; PARAMECIUM; PENICULIA; PROTOZOA; SCUTICOCILIATIA;

EID: 64249135814     PISSN: 00651583     EISSN: 16890027     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (29)

References (30)
  • 1
    • 0036126070 scopus 로고    scopus 로고
    • Phylogenetic positions of Aspidisca steini and Euplotes vannus within the order Euplotida (Hypotrichia, Ciliophora) inferred from complete small subunit ribosomal RNA gene sequences
    • Chen Z., Song W. (2002) Phylogenetic positions of Aspidisca steini and Euplotes vannus within the order Euplotida (Hypotrichia, Ciliophora) inferred from complete small subunit ribosomal RNA gene sequences. Acta Protozool. 41: 1-9
    • (2002) Acta Protozool. , vol.41 , pp. 1-9
    • Chen, Z.1    Song, W.2
  • 4
    • 0014211361 scopus 로고
    • Construction of phylogenetic tree
    • Fitch W. M., Margoliash E. (1967) Construction of phylogenetic tree. Science 155: 279-284
    • (1967) Science , vol.155 , pp. 279-284
    • Fitch, W.M.1    Margoliash, E.2
  • 5
    • 0002121675 scopus 로고    scopus 로고
    • Ontogenesis in ciliated protozoa, with emphasis on stomatogenesis
    • (Eds. K. Hausmann and P. C. Bradbury). Gustav Fisher, Stuttgart
    • Foissner W. (1996) Ontogenesis in ciliated protozoa, with emphasis on stomatogenesis. In: Ciliates, Cells as Organisms. (Eds. K. Hausmann and P. C. Bradbury). Gustav Fisher, Stuttgart, pp. 95-177
    • (1996) Ciliates, Cells as Organisms , pp. 95-177
    • Foissner, W.1
  • 6
    • 0036774780 scopus 로고    scopus 로고
    • Apofrontonia lametschwandtneri nov. gen., nov. spec., a new peniculine ciliate (Protozoa, Ciliophora) from Venezuela
    • Foissner W., Song W.(2002) Apofrontonia lametschwandtneri nov. gen., nov. spec., a new peniculine ciliate (Protozoa, Ciliophora) from Venezuela. Europ. J. Protistol. 38: 223-234
    • (2002) Europ. J. Protistol. , vol.38 , pp. 223-234
    • Foissner, W.1    Song, W.2
  • 7
    • 33745094352 scopus 로고    scopus 로고
    • Apofrontonia dohrni sp. n. and the phylogenetic relationships within Peniculia (Protista, Ciliophora, Oligohymenophorea)
    • Fokin S., Andreoli I., Verni F., Petroni G. (2006) Apofrontonia dohrni sp. n. and the phylogenetic relationships within Peniculia (Protista, Ciliophora, Oligohymenophorea). Zool. Scr. 35: 289-300
    • (2006) Zool. Scr. , vol.35 , pp. 289-300
    • Fokin, S.1    Andreoli, I.2    Verni, F.3    Petroni, G.4
  • 8
    • 0019296687 scopus 로고
    • A simple method of estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. (1980) A simple method of estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 9
    • 0021277009 scopus 로고
    • A new method for calculating evolutionary substitution rates
    • Lanave C., Preparata G., Saccone C., Serio G. (1984) A new method for calculating evolutionary substitution rates. J. Mol. Evol. 20: 86-93
    • (1984) J. Mol. Evol. , vol.20 , pp. 86-93
    • Lanave, C.1    Preparata, G.2    Saccone, C.3    Serio, G.4
  • 10
    • 33745650089 scopus 로고    scopus 로고
    • Phylogenetic position of the marine ciliate, Cardiostomatella vermiforme (Kahl, 1928) Corliss, 1960 inferred from the complete SSrRNA gene sequence, with establishment of a new order Loxocephalida n. ord. (Ciliophora, Oligohymenophorea)
    • Li L., Song W., Warren A., Wang Y., Ma H., Hu X., Chen Z. (2006) Phylogenetic position of the marine ciliate, Cardiostomatella vermiforme (Kahl, 1928) Corliss, 1960 inferred from the complete SSrRNA gene sequence, with establishment of a new order Loxocephalida n. ord. (Ciliophora, Oligohymenophorea). Europ. J. Protistol. 42: 107-114
    • (2006) Europ. J. Protistol. , vol.42 , pp. 107-114
    • Li, L.1    Song, W.2    Warren, A.3    Wang, Y.4    Ma, H.5    Hu, X.6    Chen, Z.7
  • 11
    • 33745327807 scopus 로고    scopus 로고
    • Frontonia lynnin. sp., a new marine ciliate (Protozoa, Ciliophora, Hymenostomatida)
    • from Qingdao, China, Zootaxa
    • Long H., Song W., Gong J., Hu X., Ma H., Zhu M., Wang M. (2005) Frontonia lynnin. sp., a new marine ciliate (Protozoa, Ciliophora, Hymenostomatida) from Qingdao, China. Zootaxa 1003: 57-64
    • (2005) , pp. 57-64
    • Long, H.1    Song, W.2    Gong, J.3    Hu, X.4    Ma, H.5    Zhu, M.6    Wang, M.7
  • 12
    • 0023744814 scopus 로고
    • Assessment of phylogenetic relationships among ciliated protists using partial ribosomal RNA sequences derived from reverse transcripts
    • Lynn D. H., Small E. B. (1988) Assessment of phylogenetic relationships among ciliated protists using partial ribosomal RNA sequences derived from reverse transcripts. Biosystems 21: 249-254
    • (1988) Biosystems , vol.21 , pp. 249-254
    • Lynn, D.H.1    Small, E.B.2
  • 13
    • 0002923799 scopus 로고    scopus 로고
    • A revised classification of the phylum Ciliophora Doflein, 1901
    • Lynn D. H., Small E. B. (1997) A revised classification of the phylum Ciliophora Doflein, 1901. Rev. Soc. Mex. Hist. Nat. 47: 65-78
    • (1997) Rev. Soc. Mex. Hist. Nat. , vol.47 , pp. 65-78
    • Lynn, D.H.1    Small, E.B.2
  • 14
    • 0002831062 scopus 로고    scopus 로고
    • Phylum Ciliophora Doflein, 1901
    • (Eds. J. J. Lee, G. F. Leedale, P. Bradbury). Society of Protozoologists, Lawrence, KS
    • Lynn D. H., Small E. B. (2002) Phylum Ciliophora Doflein, 1901. In: An Illustrated Guide to the Protozoa. (Eds. J. J. Lee, G. F. Leedale, P. Bradbury). Society of Protozoologists, Lawrence, KS, pp. 371-656
    • (2002) An Illustrated Guide to the Protozoa , pp. 371-656
    • Lynn, D.H.1    Small, E.B.2
  • 15
    • 43049106268 scopus 로고    scopus 로고
    • Morphogenetic processes in division of Uronemella filificum (Ciliophora, Scuticociliatida)
    • Ma H., Song W., Ma H. (2002) Morphogenetic processes in division of Uronemella filificum (Ciliophora, Scuticociliatida). J. Ocean Univ. Qingdao 1: 140-144
    • (2002) J. Ocean Univ. Qingdao , vol.1 , pp. 140-144
    • Ma, H.1    Song, W.2    Ma, H.3
  • 16
    • 0024241467 scopus 로고
    • The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions
    • Medlin L., Elwood H. J., Stickel S., Sogin M. L. (1988) The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene 71: 491-499
    • (1988) Gene , vol.71 , pp. 491-499
    • Medlin, L.1    Elwood, H.J.2    Stickel, S.3    Sogin, M.L.4
  • 17
    • 27544462592 scopus 로고    scopus 로고
    • MrModeltest version 2
    • Distributed by the author. Department of Systematic Zoology, Evolutionary Biology Centre, Uppsala University, Uppsala
    • Nylander J. A. A (2004) MrModeltest version 2. Distributed by the author. Department of Systematic Zoology, Evolutionary Biology Centre, Uppsala University, Uppsala
    • (2004)
    • Nylander, J.A.A.1
  • 18
    • 0004385565 scopus 로고
    • Phylum Ciliophora Doflein, 1901
    • (Ed. P. de Puytorac), Traité de Zoologie. Masson, Paris
    • Puytorac P. de (1994) Phylum Ciliophora Doflein, 1901. In: Infusoires ciliés. Fasc 2 Systématique. (Ed. P. de Puytorac), Traité de Zoologie. Masson, Paris, pp. 1-15
    • (1994) Infusoires ciliés. Fasc 2 Systématique , pp. 1-15
    • De Puytorac, P.1
  • 19
    • 0043129642 scopus 로고
    • Essai d'application de l'analyse phénétique à la classification du phylum des Ciliophora
    • Puytorac P. de, Grain J., Legendre P., Devaux J. (1984) Essai d'application de l'analyse phénétique à la classification du phylum des Ciliophora. J. Protozool. 31: 496-507
    • (1984) J. Protozool. , vol.31 , pp. 496-507
    • De Puytorac, P.1    Grain, J.2    Legendre, P.3    Devaux, J.4
  • 21
  • 22
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic under mixed models
    • Ronquist F. R., Huelsenbeck J. P. (2003) MrBayes 3: Bayesian phylogenetic under mixed models. Bioinformatics 19: 1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.R.1    Huelsenbeck, J.P.2
  • 23
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N., Nei M. (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 24
    • 0019739872 scopus 로고
    • A new macrosystem for the phylum Ciliophora Doflein, 1901
    • Small E. B., Lynn D. H. (1981) A new macrosystem for the phylum Ciliophora Doflein, 1901. Biosystems 14: 387-401
    • (1981) Biosystems , vol.14 , pp. 387-401
    • Small, E.B.1    Lynn, D.H.2
  • 25
    • 0002356467 scopus 로고
    • Phylum Ciliophora
    • (Eds. J. J. Lee, S. H. Hutner, E. C. Bovee). Lawrence press, Kansas
    • Small E. B., Lynn D. H. (1985) Phylum Ciliophora. In: An illustrated guide to the Protozoa. (Eds. J. J. Lee, S. H. Hutner, E. C. Bovee). Lawrence press, Kansas, pp. 393-575
    • (1985) An illustrated guide to the Protozoa , pp. 393-575
    • Small, E.B.1    Lynn, D.H.2
  • 26
    • 24344499836 scopus 로고    scopus 로고
    • Re-evaluation of the phylogenetic position of the genus Dexiotrichides (Protozoa, Ciliophora, Scuticociliatida) inferred from stomatogenetic and molecular information for Dexiotrichides pangi
    • Song W., Warren A., Roberts D., Ma H., Shang H., Ma H., Wilbert N., Miao M., Yi Z. (2005) Re-evaluation of the phylogenetic position of the genus Dexiotrichides (Protozoa, Ciliophora, Scuticociliatida) inferred from stomatogenetic and molecular information for Dexiotrichides pangi. Progr. Nat. Sci. 115: 700-707
    • (2005) Progr. Nat. Sci. , vol.115 , pp. 700-707
    • Song, W.1    Warren, A.2    Roberts, D.3    Ma, H.4    Shang, H.5    Ma, H.6    Wilbert, N.7    Miao, M.8    Yi, Z.9
  • 27
    • 0343953611 scopus 로고    scopus 로고
    • Phylogenetic relationships of the subclass Peniculia (Oligohymenophorea, Ciliophora) inferred from small subunit rRNA gene sequence
    • Strüder-Kypke M., Wright A. G., Fokin S. I., Lynn D. H. (2000) Phylogenetic relationships of the subclass Peniculia (Oligohymenophorea, Ciliophora) inferred from small subunit rRNA gene sequence. J. Eukaryot. Microbiol. 47: 419-429
    • (2000) J. Eukaryot. Microbiol. , vol.47 , pp. 419-429
    • Strüder-Kypke, M.1    Wright, A.G.2    Fokin, S.I.3    Lynn, D.H.4
  • 29
    • 0002671410 scopus 로고
    • Some probabilistic and statistical problems on the analysis of DNA sequences
    • Tavare S. (1986) Some probabilistic and statistical problems on the analysis of DNA sequences. Lect. Math. Life Sci. 17: 57-86
    • (1986) Lect. Math. Life Sci. , vol.17 , pp. 57-86
    • Tavare, S.1
  • 30
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • Thompson J. D., Higgins D. G., Gibson T. J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.