Cold stress regulation of a bi-functional 3-dehydroquinate dehydratase/shikimate dehydrogenase (DHQ/SDH)-like gene in the freshwater green alga Spirogyra varians

Botanica Marina

Volumn 52, Issue 2, 2009, Pages 178-185

  Han, Jong Won ^a   Lee, Key Pyoung ^a   Yoon, Minchul ^a   Kang, Sung Ho ^b   Kim, Gwang Hoon ^a  

^a Kongju National University   (South Korea)

^b Korea Polar Research Institute (KOPRI)   (South Korea)

Author keywords

Bi functional 3 dehydroquinate dehydratase shikimate dehydrogenase (DHQ SDH) gene; Cold stress; Green algae; Shikimate pathway; Spirogyra varians

Indexed keywords

AMINO ACID; COLD TOLERANCE; DNA; ENVIRONMENTAL STRESS; ENZYME ACTIVITY; FRESHWATER ENVIRONMENT; GENE EXPRESSION; GREEN ALGA; LIGHT INTENSITY; LOW TEMPERATURE; PEPTIDE;

CHLOROPHYTA; EMBRYOPHYTA; SPIROGYRA VARIANS;

EID: 64149100076     PISSN: 00068055     EISSN: 14374323     Source Type: Journal    
DOI: 10.1515/BOT.2009.011     Document Type: Article

References (44)

1. Ahsan, N., D.-G. Lee, S.-H. Lee, K.Y. Kang, J.J. Lee, P.J. Kim, H.-S. Yoon, J.-S. Kim and B.-H. Lee. 2007. Excess copper induced physiological and proteomic changes in germinating rice seeds. Chemosphere 67: 1182-1193.
2. Bentley, R. 1990. The shikimate pathway - A metabolic tree with many branches. CRC Crit. Rev. Biochem. Mol. Biol. 25: 307-384.
3. Bischoff, H. and H.C. Bold. 1963. Phycological studies IV. Some soil algae from enchanted rock and related algal species. Univ. Tex. Publ. No. 6318, Austin, TX.
4. Bischoff, M., J. Rösler, H.-R. Raesecke, J. Görlach, N. Amrhein and J. Schmid. 1996. Cloning of a cDNA encoding a 3-dehy-droquinate synthase from a higher plant, and analysis of the organ-specific and elicitor-induced expression of the corresponding gene. Plant Mol. Biol. 31: 69-76.
5. Bischoff, M., A. Schaller, F. Bieri, F. Kessler, N. Amrhein and J. Schmid. 2001. Molecular characterization of tomato 3-dehy-droquinate dehydratase-shikimate: NADP oxidoreductase. Plant Physiol. 125: 1891-1900.
6. Bonner, C.A. and R.A. Jensen. 1994. Cloning of a cDNA encoding the bifunctional dehydroquinase-shikimate dehydro-genase of aromatic-amino-acid biosynthesis in Nicotiana tabacum. Biochem. J. 302: 11-14.
7. Bradford, M.M. 1976. A rapid and sensitive method for quanti-tation of microgram quantities of protein utilizing the principle of protein-dye-binding. Anal. Biochem. 72: 248-254.
8. Cabané, M., J.-C. Pireaux, E. Lé ger, E. Weber, P. Dizengremel, B. Pollet and C. Lapierre. 2004. Condensed lignins are synthesized in poplar leaves exposed to ozone. Plant Physiol. 134: 586-594.
9. Cattivelli, L. and D. Bartels. 1990. Molecular cloning and characterization of cold-regulated genes in barley. Plant Physiol. 93: 1504-1510.
10. Chomczynski, P. and N. Sacchi. 1987. Single-step method of RNA isolation by acid guanidium thiocyanate-phenol-chlo-roform extraction. Anal. Biochem. 162: 156-159.
11. Danyluk, J., M. Houde, E. Rassart and F. Sarhan. 1994. Differential expression of a gene encoding an acidic dehydrin in chilling sensitive and freezing tolerant gramineae species. FEBS Lett. 344: 20-24.
12. Deka, R.K., I.A. Anton, B. Dunbar and J.R. Coggins. 1994. The characterization of the shikimate pathway enzyme dehydro-quinase from Pisum sativum. FEBS Lett. 349: 397-402.
13. Díaz, J. and F. Merino. 1998. Wound-induced shikimate dehy-drogenase and peroxidase related lignification in pepper (Capsicum annuumL.) leaves. J. Plant Physiol. 152: 51-57.
14. Díaz, J., A. Bernal, F. Pomar and F. Merino. 2001. Induction of shikimate dehydrogenase and peroxidase in pepper (Capsicum annuum L.) seedlings in response to copper stress and its relation to lignification. Plant Sci. 161: 179-188.
15. Ding, L., D. Hofius, M.-R. Hajirezaei, A.R. Fernie, F. Bornke and U. Sonnewald. 2007. Functional analysis of the essential bifunctional tobacco enzyme 3-dehydroquinate dehydratase/ shikimate dehydrogenase in transgenic tobacco plants J. Exp. Bot. 58: 2053-2067.
16. Dixon, R.A. and N.L. Paiva. 1995. Stress induced phenylpropa-noid metabolism. The Plant Cell 7: 1085-1097.
17. Gilmour, S.J., N.N. Artus and M.F. Thomashow. 1992. cDNA sequence analysis and expression of two cold-regulated genes of Arabidopsis thaliana. Plant Mol. Biol. 18: 13-21.
18. Görlach, J., H.-R. Raesecke, D. Rentsch, M. Regenass, P. Roy, M. Zala, C. Keel, T. Boller, N. Amrhein and J. Schmid. 1995. Temporally distinct accumulation of transcripts encoding enzymes of the prechorismate pathway in elicitor-treated, cultured tomato cells. Proc. Natl. Acad. Sci. USA 92: 3166-3170.
19. Graham, D. and B.D. Patterson. 1982. Responses of plants to low, non freezing temperature: protein, metabolism, and acclimation. Annu. Rev. Plant Physiol. 33: 347-372.
20. Guy, C.L. 1990. Cold acclimation and freezing stress tolerance: role of protein metabolism. Annu. Rev. Plant Physiol. Plant Mol. Biol. 41: 187-223.
21. Guy, C.L., K.J. Niemi and R. Brambl. 1985. Altered gene expression during cold acclimation of spinach. Proc. Natl. Acad. Sci. USA 82: 3673-3677.
22. Hajela, R.K., D.P. Horvath, S.J. Gilmour and M.F. Thomashow. 1990. Molecular cloning and expression of cor (Cold-Regulated) genes in Arabidopsis thaliana. Plant Physiol. 93: 1246-1252.
23. Han, J.W., M.C. Yoon, K.P. Lee and G.H. Kim. 2007. Identification and isolation of differentially expressed gene in response to cold stress in a green alga, Spirogyra varians (Zygnema-tales). Algae 22: 131-139.
24. Haslam, E. 1993. Shikimic acid: metabolism and metabolites. John Wiley and Sons, Chichester. 387 pp.
25. Henstrand, J.M., K.F. McCue, K. Brink, A.K. Handa, K.M. Herrmann and E.E. Conn. 1992. Light and fungal elicitor induce 3-deoxy-D-arabino- heptulosonate 7-phosphate synthase mRNA in suspension cultured cells of parsley (Petroselinum crispum L.). Plant Physiol. 98: 761-763.
26. Herrmann, K.M. 1995a. The shikimate pathway: early steps in the biosynthesis of aromatic compounds. Plant Cell. 7: 907-919.
27. Herrmann, K.M. 1995b. The shikimate pathway as an entry to aromatic secondary metabolism. Plant Physiol. 107: 7-12.
28. Herrmann, K.M. and L.M. Weaver. 1999. The shikimate pathway. Annu. Rev. Plant Mol. Biol. 50: 473-503.
29. Houde, M., C. Daniel, M. Lachapelle, F. Allard, S. Laliberté and F. Sarhan. 1995. Immunolocalization of freezing-tolerance-associated proteins in the cytoplasm and nucleoplasm of wheat crown tissues. Plant J. 8: 583-593.
30. Hwang, I.T., Y.J. Kim, S.H. Kim, C.I. Kwak, Y.Y. Gu and J.Y. Chun. 2003. Annealing control primer system for improving specificity of PCR amplification. Biotechniques 35: 1180-1184.
31. Kim, G.H., M. Yoon and T.A. Klochkova. 2005. A moving mat: phototaxis in the filamentous green algae Spirogyra (Chlo-rophyta, Zygnemataceae). J. Phycol. 41: 232-237.
32. Kim, G.H., M.C. Yoon, J.A. West, T.A. Klochkova and S.H. Kim. 2007. Possible surface carbohydrates involved in signaling during conjugation process in Zygnema cruciatum monitored with FITC-lectins (Zygnemataceae, Chlorophyta). Phycol. Res. 55: 135-142.
33. Knaggs, A.R. 1999. The biosynthesis of shikimate metabolites. Nat. Prod. Rep. 16: 525-560.
34. Liang, P. and A.B. Pardee. 1992. Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science 257: 967-971.
35. Liang, P., L. Averboukh and A.B. Pardee. 1993. Distribution and cloning of eukaryotic mRNAs by means of differential display: refinements and optimization. Nucleic Acids Res. 21: 3269-3275.
36. Liang, P., W. Zhu, X. Zhang, Z. Guo, R.P. O'Connell, L. Aver-boukh, F. Wang and A.B. Pardee. 1994. Differential display using one-base anchored oligo-dT primers. Nucleic Acids Res. 22: 5763-5764.
37. Manchenko, G.P. 1994. Handbook of detection of enzymes on electrophoretic gels. CRC Press, Boca Raton, FL. pp. 35.
38. Mousdale, D.M., M.S. Campbell and J.R. Coggins. 1987. Purification and characterization of a bifunctional dehydroqui-nase-shikimate: NADP oxidoreductase from pea's seedlings. Phytochemistry 26: 2665-2670.
39. Pearce, R.S., C.E. Houlston, K.M. Atherton, J.E. Rixon, P. Harrison, M.A. Hughes and M.A. Dunn. 1998. Localization of expression of three cold-induced genes, blt101, blt4.9, and blt14 in different tissues of the crown and developing leaves of cold-acclimated cultivated barley. Plant Physiol. 117: 787-795.
40. Sambrook, J. and D.W. Russell. 2001. Molecular cloning: a laboratory manual. Cold Spring Harbor Lab. Press, Plainview, NY. pp. 7.32-7.34.
41. Schmid, J. and N. Amrhein. 1995. Molecular organization of the shikimate pathway in higher plants. Phytochemistry 39: 737-749.
42. Thomashow, M.F. 1990. Molecular genetics of cold acclimation in higher plants. Adv. Genet. 28: 99-131.
43. Umeda, M., C. Hara, Y. Matsubayashi, H. Li, Q. Liu, F. Tadokoro, S. Aotsuka and H. Uchimiya. 1994. Expressed sequencetags from cultured cells of rice (Oryza sativaL.) under stressed conditions: analysis of transcripts of genes engaged in ATP-generating pathways. Plant Mol. Biol. 25: 469-478.
44. Weaver, L.M. and K.M. Herrmann. 1997. Dynamics of the shi-kimate pathway in plants. Trends Plant Sci. 2: 346-351.