-
1
-
-
0347623371
-
Genome-Wide Survey of Human Alternative Pre-mRNA Splicing with Exon Junction Microarrays
-
DOI 10.1126/science.1090100
-
Johnson, J. M., J. Castle, P. Garrett-Engele, Z. Kan, P. M. Loerch, C. D. Armour, R. Santos, E. E. Schadt, R. Stoughton and D. D. Shoemaker: Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays. Science, 302, 2141-4 (2003). (Pubitemid 38017950)
-
(2003)
Science
, vol.302
, Issue.5653
, pp. 2141-2144
-
-
Johnson, J.M.1
Castle, J.2
Garrett-Engele, P.3
Kan, Z.4
Loerch, P.M.5
Armour, C.D.6
Santos, R.7
Schadt, E.E.8
Stoughton, R.9
Shoemaker, D.D.10
-
2
-
-
42449098125
-
Splicing regulation: From a parts list of regulatory elements to an integrated splicing code
-
Wang, Z. and C. B. Burge: Splicing regulation: From a parts list of regulatory elements to an integrated splicing code. RNA (2008).
-
(2008)
RNA
-
-
Wang, Z.1
Burge, C.B.2
-
3
-
-
18344364099
-
Understanding alternative splicing: Towards a cellular code
-
DOI 10.1038/nrm1645
-
Matlin, A. J., F. Clark and C. W. Smith: Understanding alternative splicing: towards a cellular code. Nat Rev Mol Cell Biol, 6, 386-98 (2005). (Pubitemid 40637856)
-
(2005)
Nature Reviews Molecular Cell Biology
, vol.6
, Issue.5
, pp. 386-398
-
-
Matlin, A.J.1
Clark, F.2
Smith, C.W.J.3
-
4
-
-
0037041395
-
An extensive network of coupling among gene expression machines
-
DOI 10.1038/416499a
-
Maniatis, T. and R. Reed: An extensive network of coupling among gene expression machines. Nature, 416, 499-506 (2002). (Pubitemid 34288845)
-
(2002)
Nature
, vol.416
, Issue.6880
, pp. 499-506
-
-
Maniatis, T.1
Reed, R.2
-
5
-
-
1642458353
-
RNA Folding Affects the Recruitment of SR Proteins by Mouse and Human Polypurinic Enhancer Elements in the Fibronectin EDA Exon
-
DOI 10.1128/MCB.24.3.1387-1400.2004
-
Buratti, E., A. F. Muro, M. Giombi, D. Gherbassi, A. Iaconcig and F. E. Baralle: RNA folding affects the recruitment of SR proteins by mouse and human polypurinic enhancer elements in the fibronectin EDA exon. Mol Cell Biol, 24, 1387-400 (2004). (Pubitemid 38112198)
-
(2004)
Molecular and Cellular Biology
, vol.24
, Issue.3
, pp. 1387-1400
-
-
Buratti, E.1
Muro, A.F.2
Giombi, M.3
Gherbassi, D.4
Iaconcig, A.5
Baralle, F.E.6
-
6
-
-
0032701796
-
Tackling Tat
-
DOI 10.1006/jmbi.1999.3060
-
Karn, J.: Tackling Tat. J Mol Biol, 293, 235-54. (1999). (Pubitemid 29516167)
-
(1999)
Journal of Molecular Biology
, vol.293
, Issue.2
, pp. 235-254
-
-
Karn, J.1
-
7
-
-
33746403681
-
Controlling the Elongation Phase of Transcription with P-TEFb
-
DOI 10.1016/j.molcel.2006.06.014, PII S1097276506004291
-
Peterlin, B. M. and D. H. Price: Controlling the elongation phase of transcription with P-TEFb. Mol Cell, 23, 297-305 (2006). (Pubitemid 44128850)
-
(2006)
Molecular Cell
, vol.23
, Issue.3
, pp. 297-305
-
-
Peterlin, B.M.1
Price, D.H.2
-
8
-
-
0027494083
-
Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity
-
Purcell, D. F. and M. A. Martin: Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity. J. Virol., 67, 6365-78 (1993). (Pubitemid 23309100)
-
(1993)
Journal of Virology
, vol.67
, Issue.11
, pp. 6365-6378
-
-
Purcell, D.F.J.1
Martin, M.A.2
-
9
-
-
0025372613
-
A novel human immunodeficiency virus type 1 protein, tev, shares sequences with tat, env, and rev proteins
-
Benko, D. M., S. Schwartz, G. N. Pavlakis and B. K. Felber: A novel human immunodeficiency virus type 1 protein, tev, shares sequences with tat, env, and rev proteins. J Virol, 64, 2505-18 (1990). (Pubitemid 20171234)
-
(1990)
Journal of Virology
, vol.64
, Issue.6
, pp. 2505-2518
-
-
Benko, D.M.1
Schwartz, S.2
Pavlakis, G.N.3
Felber, B.K.4
-
10
-
-
0035261070
-
Dating the common ancestor of SIVcpz and HIV-1 group M and the origin of HIV-1 subtypes using a new method to uncover clock-like molecular evolution
-
Salemi, M., K. Strimmer, W. W. Hall, M. Duffy, E. Delaporte, S. Mboup, M. Peeters and A. M. Vandamme: Dating the common ancestor of SIVcpz and HIV-1 group M and the origin of HIV-1 subtypes using a new method to uncover clock-like molecular evolution. FASEB J, 15, 276-8 (2001).
-
(2001)
FASEB J
, vol.15
, pp. 276-278
-
-
Salemi, M.1
Strimmer, K.2
Hall, W.W.3
Duffy, M.4
Delaporte, E.5
Mboup, S.6
Peeters, M.7
Vandamme, A.M.8
-
11
-
-
33745822404
-
A novel splice donor site in the gag-pol gene is required for HIV-1 RNA stability
-
DOI 10.1074/jbc.M513698200
-
Lutzelberger, M., L. S. Reinert, A. T. Das, B. Berkhout and J. Kjems: A novel splice donor site in the gag-pol gene is required for HIV-1 RNA stability. J Biol Chem, 281, 18644-51 (2006). (Pubitemid 44035524)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.27
, pp. 18644-18651
-
-
Lutzelberger, M.1
Reinert, L.S.2
Das, A.T.3
Berkhout, B.4
Kjems, J.5
-
12
-
-
0025335833
-
Cloning and functional analysis of multiply spliced mRNA species of human immunodeficiency virus type 1
-
Schwartz, S., B. K. Felber, D. M. Benko, E. M. Fenyo and G. N. Pavlakis: Cloning and functional analysis of multiply spliced mRNA species of human immunodeficiency virus type 1. J Virol, 64, 2519-29 (1990). (Pubitemid 20171235)
-
(1990)
Journal of Virology
, vol.64
, Issue.6
, pp. 2519-2529
-
-
Schwartz, S.1
Felber, B.K.2
Benko, D.M.3
Fenyo, E.-M.4
Pavlakis, G.N.5
-
13
-
-
0025743306
-
Importance of the nef gene for maintenance of high virus loads and for development of AIDS
-
Kestler, H. W., 3rd, D. J. Ringler, K. Mori, D. L. Panicali, P. K. Sehgal, M. D. Daniel and R. C. Desrosiers: Importance of the nef gene for maintenance of high virus loads and for development of AIDS. Cell, 65, 651-62 (1991).
-
(1991)
Cell
, vol.65
, pp. 651-662
-
-
Kestler III, H.W.1
Ringler, D.J.2
Mori, K.3
Panicali, D.L.4
Sehgal, P.K.5
Daniel, M.D.6
Desrosiers, R.C.7
-
14
-
-
0033562095
-
The Ins and outs of HIV Rev
-
DOI 10.1006/abbi.1999.1207
-
Hope, T. J.: The ins and outs of HIV Rev. Arch Biochem Biophys, 365, 186-91 (1999). (Pubitemid 29391625)
-
(1999)
Archives of Biochemistry and Biophysics
, vol.365
, Issue.2
, pp. 186-191
-
-
Hope, T.J.1
-
15
-
-
18844468523
-
Viral protein R regulates nuclear import of the HIV-1 pre-integration complex
-
DOI 10.1093/emboj/17.4.909
-
Popov, S., M. Rexach, G. Zybarth, N. Reiling, M. A. Lee, L. Ratner, C. M. Lane, M. S. Moore, G. Blobel and M. Bukrinsky: Viral protein R regulates nuclear import of the HIV-1 pre-integration complex. EMBO J, 17, 909-17 (1998). (Pubitemid 28077645)
-
(1998)
EMBO Journal
, vol.17
, Issue.4
, pp. 909-917
-
-
Popov, S.1
Rexach, M.2
Zybarth, G.3
Railing, N.4
Lee, M.-A.5
Ratner, L.6
Lane, C.M.7
Moore, M.S.8
Blobel, G.9
Bukrinsky, M.10
-
16
-
-
0034467080
-
Role of Vif in stability of the human immunodeficiency virus type 1 core
-
DOI 10.1128/JVI.74.23.11055-11066.2000
-
Ohagen, A. and D. Gabuzda: Role of Vif in stability of the human immunodeficiency virus type 1 core. J Virol, 74, 11055-66 (2000). (Pubitemid 32223970)
-
(2000)
Journal of Virology
, vol.74
, Issue.23
, pp. 11055-11066
-
-
Ohagen, A.1
Gabuzda, D.2
-
17
-
-
0028807036
-
Two strong 5′ splice sites and competing, suboptimal 3′ splice sites involved in alternative splicing of human immunodeficiency virus type 1 RNA
-
O'Reilly, M. M., M. T. McNally and K. L. Beemon: Two strong 5' splice sites and competing, suboptimal 3' splice sites involved in alternative splicing of human immunodeficiency virus type 1 RNA. Virology, 213, 373-85 (1995).
-
(1995)
Virology
, vol.213
, pp. 373-385
-
-
O'Reilly, M.M.1
Mcnally, M.T.2
Beemon, K.L.3
-
19
-
-
0035031935
-
The sequence complementarity between HIV-1 5' splice site SD4 and U1 snRNA determines the steady-state level of an unstable env pre-mRNA
-
DOI 10.1017/S1355838201001212
-
Kammler, S., C. Leurs, M. Freund, J. Krummheuer, K. Seidel, T. O. Tange, M. K. Lund, J. Kjems, A. Scheid and H. Schaal: The sequence complementarity between HIV-1 5' splice site SD4 and U1 snRNA determines the steadystate level of an unstable env pre-mRNA. RNA, 7, 421-34 (2001). (Pubitemid 32385207)
-
(2001)
RNA
, vol.7
, Issue.3
, pp. 421-434
-
-
Kammler, S.1
Leurs, C.2
Freund, M.3
Krummheuer, J.4
Seidel, K.5
Tange, T.O.6
Lund, M.K.7
Kjems, J.8
Scheid, A.9
Schaal, H.10
-
20
-
-
2642577338
-
A bidirectional SF2/ASF- and SRp40-dependent splicing enhancer regulates human immunodeficiency virus type 1 rev, env, vpu, and nef gene expression
-
DOI 10.1128/JVI.78.12.6517-6526.2004
-
Caputi, M., M. Freund, S. Kammler, C. Asang and H. Schaal: A bidirectional SF2/ASF- and SRp40-dependent splicing enhancer regulates human immunodeficiency virus type 1 rev, env, vpu, and nef gene expression. J Virol, 78, 6517-26 (2004). (Pubitemid 38715950)
-
(2004)
Journal of Virology
, vol.78
, Issue.12
, pp. 6517-6526
-
-
Caputi, M.1
Freund, M.2
Kammler, S.3
Asang, C.4
Schaal, H.5
-
21
-
-
13944279581
-
Splicing of human immunodeficiency virus RNA is position-dependent suggesting sequential removal of introns from the 5' end
-
DOI 10.1093/nar/gki185
-
Bohne, J., H. Wodrich and H. G. Krausslich: Splicing of human immunodeficiency virus RNA is position-dependent suggesting sequential removal of introns from the 5' end. Nucleic Acids Res, 33, 825-37 (2005). (Pubitemid 41435020)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.3
, pp. 825-837
-
-
Bohne, J.1
Wodrich, H.2
Krausslich, H.-G.3
-
22
-
-
0027479628
-
Functional sites in the 5' region of human immunodeficiency virus type 1 RNA form defined structural domains
-
DOI 10.1006/jmbi.1993.1041
-
Baudin, F., R. Marquet, C. Isel, J. L. Darlix, B. Ehresmann and C. Ehresmann: Functional sites in the 5' region of human immunodeficiency virus type 1 RNA form defined structural domains. J Mol Biol, 229, 382-97 (1993). (Pubitemid 23080387)
-
(1993)
Journal of Molecular Biology
, vol.229
, Issue.2
, pp. 382-397
-
-
Baudin, F.1
Marquet, R.2
Isel, C.3
Carlix, J.-L.4
Ehresmann, B.5
Ehresmann, C.6
-
23
-
-
21744452846
-
The HIV-1 leader RNA conformational switch regulates RNA dimerization but does not regulate mRNA translation
-
DOI 10.1021/bi0502588
-
Abbink, T. E., M. Ooms, P. C. Haasnoot and B. Berkhout: The HIV-1 leader RNA conformational switch regulates RNA dimerization but does not regulate mRNA translation. Biochemistry, 44, 9058-66 (2005). (Pubitemid 40943220)
-
(2005)
Biochemistry
, vol.44
, Issue.25
, pp. 9058-9066
-
-
Abbink, T.E.M.1
Ooms, M.2
Haasnoot, P.C.J.3
Berkhout, B.4
-
24
-
-
40149110941
-
RNA structure modulates splicing efficiency at the human immunodeficiency virus type 1 major splice donor
-
DOI 10.1128/JVI.01479-07
-
Abbink, T. E. and B. Berkhout: RNA structure modulates splicing efficiency at the human immunodeficiency virus type 1 major splice donor. J Virol, 82, 3090-8 (2008). (Pubitemid 351329197)
-
(2008)
Journal of Virology
, vol.82
, Issue.6
, pp. 3090-3098
-
-
Abbink, T.E.M.1
Berkhout, B.2
-
25
-
-
23344454595
-
An exonic splicing silencer downstream of the 3' splice site A2 is required for efficient human immunodeficiency virus type 1 replication
-
DOI 10.1128/JVI.79.16.10478-10486.2005
-
Madsen, J. M. and C. M. Stoltzfus: An exonic splicing silencer downstream of the 3' splice site A2 is required for efficient human immunodeficiency virus type 1 replication. J Virol, 79, 10478-86 (2005). (Pubitemid 41102234)
-
(2005)
Journal of Virology
, vol.79
, Issue.16
, pp. 10478-10486
-
-
Madsen, J.M.1
Stoltzfus, C.M.2
-
26
-
-
33645034592
-
A suboptimal 5' splice site downstream of HIV-1 splice site A1 is required for unspliced viral mRNA accumulation and efficient virus replication
-
Madsen, J. M. and C. M. Stoltzfus: A suboptimal 5' splice site downstream of HIV-1 splice site A1 is required for unspliced viral mRNA accumulation and efficient virus replication. Retrovirology, 3, 10 (2006).
-
(2006)
Retrovirology
, vol.3
, pp. 10
-
-
Madsen, J.M.1
Stoltzfus, C.M.2
-
27
-
-
0030821340
-
The HIV-1 5' LTR poly (A) site is inactivated by U1 snRNP interaction with the downstream major splice donor site
-
DOI 10.1093/emboj/16.18.5752
-
Ashe, M. P., L. H. Pearson and N. J. Proudfoot: The HIV-1 5' LTR poly (A) site is inactivated by U1 snRNP interaction with the downstream major splice donor site. EMBO J, 16, 5752-63 (1997). (Pubitemid 27399866)
-
(1997)
EMBO Journal
, vol.16
, Issue.18
, pp. 5752-5763
-
-
Ashe, M.P.1
Pearson, L.H.2
Proudfoot, N.J.3
-
28
-
-
0033952258
-
Stem-loop 1 of the U1 snRNP plays a critical role in the suppression of HIV-1 polyadenylation
-
DOI 10.1017/S1355838200991957
-
Ashe, M. P., A. Furger and N. J. Proudfoot: Stem-loop 1 of the U1 snRNP plays a critical role in the suppression of HIV-1 polyadenylation. RNA, 6, 170-7 (2000). (Pubitemid 30091588)
-
(2000)
RNA
, vol.6
, Issue.2
, pp. 170-177
-
-
Ashe, M.P.1
Furger, A.2
Proudfoot, N.J.3
-
29
-
-
38649096939
-
A 5' Splice Site Enhances the Recruitment of Basal Transcription Initiation Factors In Vivo
-
DOI 10.1016/j.molcel.2007.11.035, PII S1097276508000075
-
Damgaard, C. K., S. Kahns, S. Lykke-Andersen, A. L. Nielsen, T. H. Jensen and J. Kjems: A 5' splice site enhances the recruitment of basal transcription initiation factors in vivo. Mol Cell, 29, 271-8 (2008). (Pubitemid 351172825)
-
(2008)
Molecular Cell
, vol.29
, Issue.2
, pp. 271-278
-
-
Damgaard, C.K.1
Kahns, S.2
Lykke-Andersen, S.3
Nielsen, A.L.4
Jensen, T.H.5
Kjems, J.6
-
30
-
-
0028316954
-
The tat/rev intron of human immunodeficiency virus type 1 is inefficiently spliced because of suboptimal signals in the 3' splice site
-
Staffa, A. and A. Cochrane: The tat/rev intron of human immunodeficiency virus type 1 is inefficiently spliced because of suboptimal signals in the 3' splice site. J Virol, 68, 3071-9 (1994).
-
(1994)
J Virol
, vol.68
, pp. 3071-3079
-
-
Staffa, A.1
Cochrane, A.2
-
31
-
-
0030872854
-
Splicing efficiency of human immunodeficiency virus type 1 tat RNA is determined by both a suboptimal 3' splice site and a 10 nucleotide exon splicing silencer element located within tat exon 2
-
DOI 10.1093/nar/25.4.861
-
Si, Z., B. A. Amendt and C. M. Stoltzfus: Splicing efficiency of human immunodeficiency virus type 1 tat RNA is determined by both a suboptimal 3' splice site and a 10 nucleotide exon splicing silencer element located within tat exon 2. Nucleic Acids Res, 25, 861-7 (1997). (Pubitemid 27299844)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.4
, pp. 861-867
-
-
Si, Z.-H.1
Amendt, B.A.2
Stoltzfus, C.M.3
-
32
-
-
0035863847
-
Conserved stem-loop structures in the HIV-1 RNA region containing the A3 3' splice site and its cis-regulatory element: Possible involvement in RNA splicing
-
Jacquenet, S., D. Ropers, P. S. Bilodeau, L. Damier, A. Mougin, C. M. Stoltzfus and C. Branlant: Conserved stemloop structures in the HIV-1 RNA region containing the A3 3' splice site and its cis-regulatory element: possible involvement in RNA splicing. Nucleic Acids Res, 29, 464-78 (2001). (Pubitemid 32060933)
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.2
, pp. 464-478
-
-
Jacquenet, S.1
Ropers, D.2
Bilodeau, P.S.3
Damier, L.4
Mougin, A.5
Stoltzfus, C.M.6
Branlant, C.7
-
33
-
-
0031559580
-
The D1-A2 and D2-A2 pairs of splice sites from human immunodeficiency virus type 1 are highly efficient in vitro, in spite of an unusual branch site
-
DOI 10.1006/bbrc.1997.7091
-
Damier, L., L. Domenjoud and C. Branlant: The D1-A2 and D2-A2 pairs of splice sites from human immunodeficiency virus type 1 are highly efficient in vitro, in spite of an unusual branch site. Biochem Biophys Res Commun, 237, 182-7 (1997). (Pubitemid 27390348)
-
(1997)
Biochemical and Biophysical Research Communications
, vol.237
, Issue.1
, pp. 182-187
-
-
Damier, L.1
Domenjoud, L.2
Branlant, C.3
-
34
-
-
20644443276
-
Overlapping cis sites used for splicing of HIV-1 env/nef and rev mRNAs
-
Swanson, A. K. and C. M. Stoltzfus: Overlapping cis sites used for splicing of HIV-1 env/nef and rev mRNAs. J Biol Chem, 273, 34551-7 (1998).
-
(1998)
J Biol Chem
, vol.273
, pp. 34551-34557
-
-
Swanson, A.K.1
Stoltzfus, C.M.2
-
35
-
-
0035965130
-
SF2/ASF binds to a splicing enhancer in the third HIV-1 tat exon and stimulates U2AF binding independently of the RS domain
-
DOI 10.1006/jmbi.2001.4971
-
Tange, T. O. and J. Kjems: SF2/ASF binds to a splicing enhancer in the third HIV-1 tat exon and stimulates U2AF binding independently of the RS domain. J Mol Biol, 312, 649-62 (2001). (Pubitemid 33120935)
-
(2001)
Journal of Molecular Biology
, vol.312
, Issue.4
, pp. 649-662
-
-
Tange, T.O.1
Kjems, J.2
-
36
-
-
0028858388
-
Inefficient spliceosome assembly and abnormal branch site selection in splicing of an HIV-1 transcript in vitro
-
Dyhr-Mikkelsen, H. and J. Kjems: Inefficient spliceosome assembly and abnormal branch site selection in splicing of an HIV-1 transcript in vitro. J Biol Chem, 270, 24060-6 (1995).
-
(1995)
J Biol Chem
, vol.270
, pp. 24060-24066
-
-
Dyhr-Mikkelsen, H.1
Kjems, J.2
-
37
-
-
33845892508
-
The strength of the HIV-1 3' splice sites affects Rev function
-
Kammler, S., M. Otte, I. Hauber, J. Kjems, J. Hauber and H. Schaal: The strength of the HIV-1 3' splice sites affects Rev function. Retrovirology, 3, 89 (2006).
-
(2006)
Retrovirology
, vol.3
, pp. 89
-
-
Kammler, S.1
Otte, M.2
Hauber, I.3
Kjems, J.4
Hauber, J.5
Schaal, H.6
-
38
-
-
0036974666
-
A Janus splicing regulatory element modulates HIV-1 tat and rev mRNA production by coordination of hnRNP A1 cooperative binding
-
DOI 10.1016/S0022-2836(02)00967-1
-
Marchand, V., A. Mereau, S. Jacquenet, D. Thomas, A. Mougin, R. Gattoni, J. Stevenin and C. Branlant: A Janus splicing regulatory element modulates HIV-1 tat and rev mRNA production by coordination of hnRNP A1 cooperative binding. J Mol Biol, 323, 629-52 (2002). (Pubitemid 36160221)
-
(2002)
Journal of Molecular Biology
, vol.323
, Issue.4
, pp. 629-652
-
-
Marchand, V.1
Mereau, A.2
Jacquenet, S.3
Thomas, D.4
Mougin, A.5
Gattoni, R.6
Stevenin, J.7
Branlant, C.8
-
39
-
-
0036849108
-
HnRNP A1 controls HIV-1 mRNA splicing through cooperative binding to intron and exon splicing silencers in the context of a conserved secondary structure
-
DOI 10.1017/S1355838202023075
-
Damgaard, C. K., T. O. Tange and J. Kjems: hnRNP A1 controls HIV-1 mRNA splicing through cooperative binding to intron and exon splicing silencers in the context of a conserved secondary structure. RNA, 8, 1401-15 (2002). (Pubitemid 35332964)
-
(2002)
RNA
, vol.8
, Issue.11
, pp. 1401-1415
-
-
Damgaard, C.K.1
Tange, T.O.2
Kjems, J.3
-
40
-
-
0033565285
-
HnRNP A/B proteins are required for inhibition of HIV-1 pre-mRNA splicing
-
DOI 10.1093/emboj/18.14.4060
-
Caputi, M., A. Mayeda, A. R. Krainer and A. M. Zahler: hnRNP A/B proteins are required for inhibition of HIV-1 pre-mRNA splicing. EMBO J, 18, 4060-7 (1999). (Pubitemid 29335858)
-
(1999)
EMBO Journal
, vol.18
, Issue.14
, pp. 4060-4067
-
-
Caputi, M.1
Mayeda, A.2
Krainer, A.R.3
Zahler, A.M.4
-
41
-
-
0034886605
-
RNA splicing at human immunodeficiency virus type 1 3' splice site A2 is regulated by binding of hnRNP A/B proteins to an exonic splicing silencer element
-
DOI 10.1128/JVI.75.18.8487-8497.2001
-
Bilodeau, P. S., J. K. Domsic, A. Mayeda, A. R. Krainer and C. M. Stoltzfus: RNA splicing at human immunodeficiency virus type 1 3' splice site A2 is regulated by binding of hnRNP A/B proteins to an exonic splicing silencer element. J Virol, 75, 8487-97 (2001). (Pubitemid 32768953)
-
(2001)
Journal of Virology
, vol.75
, Issue.18
, pp. 8487-8497
-
-
Bilodeau, P.S.1
Domsic, J.K.2
Mayeda, A.3
Krainer, A.R.4
Stoltzfus, C.M.5
-
42
-
-
0035798607
-
A second exon splicing silencer within human immunodeficiency virus type 1 tat exon 2 represses splicing of Tat mRNA and binds protein hnRNP H
-
Jacquenet, S., A. Mereau, P. S. Bilodeau, L. Damier, C. M. Stoltzfus and C. Branlant: A second exon splicing silencer within human immunodeficiency virus type 1 tat exon 2 represses splicing of Tat mRNA and binds protein hnRNP H. J Biol Chem, 276, 40464-75 (2001).
-
(2001)
J Biol Chem
, vol.276
, pp. 40464-40475
-
-
Jacquenet, S.1
Mereau, A.2
Bilodeau, P.S.3
Damier, L.4
Stoltzfus, C.M.5
Branlant, C.6
-
43
-
-
0035886048
-
The hnRNP A1 protein regulates HIV-1 tat splicing via a novel intron silencer element
-
DOI 10.1093/emboj/20.20.5748
-
Tange, T. O., C. K. Damgaard, S. Guth, J. Valcarcel and J. Kjems: The hnRNP A1 protein regulates HIV-1 tat splicing via a novel intron silencer element. EMBO J, 20, 5748-58 (2001). (Pubitemid 33014352)
-
(2001)
EMBO Journal
, vol.20
, Issue.20
, pp. 5748-5758
-
-
Tange, T.O.1
Damgaard, C.K.2
Guth, S.3
Valcarcel, J.4
Kjems, J.5
-
44
-
-
0035691667
-
Exon identity established through differential antagonism between exonic splicing silencer-bound hnRNP A1 and enhancer-bound SR proteins
-
DOI 10.1016/S1097-2765(01)00409-9
-
Zhu, J., A. Mayeda and A. R. Krainer: Exon identity established through differential antagonism between exonic splicing silencer-bound hnRNP A1 and enhancer-bound SR proteins. Mol Cell, 8, 1351-61 (2001). (Pubitemid 34086947)
-
(2001)
Molecular Cell
, vol.8
, Issue.6
, pp. 1351-1361
-
-
Zhu, J.1
Mayeda, A.2
Krainer, A.R.3
-
45
-
-
0141457246
-
Control of HIV-1 env RNA splicing and transport: Investigating the role of hnRNP A1 in exon splicing silencer (ESS3a) function
-
DOI 10.1016/S0042-6822(03)00400-8
-
Asai, K., C. Platt and A. Cochrane: Control of HIV-1 env RNA splicing and transport: investigating the role of hnRNP A1 in exon splicing silencer (ESS3a) function. Virology, 314, 229-42 (2003). (Pubitemid 37153313)
-
(2003)
Virology
, vol.314
, Issue.1
, pp. 229-242
-
-
Asai, K.1
Platt, C.2
Cochrane, A.3
-
46
-
-
1642372088
-
SC35 and Heterogeneous Nuclear Ribonucleoprotein A/B Proteins Bind to a Juxtaposed Exonic Splicing Enhancer/Exonic Splicing Silencer Element to Regulate HIV-1 tat Exon 2 Splicing
-
DOI 10.1074/jbc.M312743200
-
Zahler, A. M., C. K. Damgaard, J. Kjems and M. Caputi: SC35 and heterogeneous nuclear ribonucleoprotein A/B proteins bind to a juxtaposed exonic splicing enhancer/exonic splicing silencer element to regulate HIV- 1 tat exon 2 splicing. J Biol Chem, 279, 10077-84 (2004). (Pubitemid 38372611)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.11
, pp. 10077-10084
-
-
Zahler, A.M.1
Damgaard, C.K.2
Kjems, J.3
Caputi, M.4
-
47
-
-
33845993932
-
Biochemical and NMR study on the competition between proteins SC35, SRp40 and hnRNP A1 at the HIV-1 Tat exon 2 splicing site
-
Hallay, H., N. Locker, L. Ayadi, D. Ropers, E. Guittet and C. Branlant: Biochemical and NMR study on the competition between proteins SC35, SRp40 and hnRNP A1 at the HIV-1 Tat exon 2 splicing site. J Biol Chem (2006).
-
(2006)
J Biol Chem
-
-
Hallay, H.1
Locker, N.2
Ayadi, L.3
Ropers, D.4
Guittet, E.5
Branlant, C.6
-
48
-
-
3142713701
-
Differential effects of the SR proteins 9G8, SC35, ASF/SF2, and SRp40 on the utilization of the A1 to A5 splicing sites of HIV-1 RNA
-
DOI 10.1074/jbc.M404452200
-
Ropers, D., L. Ayadi, R. Gattoni, S. Jacquenet, L. Damier, C. Branlant and J. Stevenin: Differential effects of the SR proteins 9G8, SC35, ASF/SF2, and SRp40 on the utilization of the A1 to A5 splicing sites of HIV-1 RNA. J Biol Chem, 279, 29963-73 (2004). (Pubitemid 38937916)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.29
, pp. 29963-29973
-
-
Ropers, D.1
Ayadi, L.2
Gattoni, R.3
Jacquenet, S.4
Damier, L.5
Branlant, C.6
Stevenin, J.7
-
49
-
-
33644913421
-
Role of viral splicing elements and cellular RNA binding proteins in regulation of HIV-1 alternative RNA splicing
-
Stoltzfus, C. M. and J. M. Madsen: Role of viral splicing elements and cellular RNA binding proteins in regulation of HIV-1 alternative RNA splicing. Curr HIV Res, 4, 43-55 (2006).
-
(2006)
Curr HIV Res
, vol.4
, pp. 43-55
-
-
Stoltzfus, C.M.1
Madsen, J.M.2
-
50
-
-
0242637344
-
Human Immunodeficiency Virus Type 1 hnRNP A/B-Dependent Exonic Splicing Silencer ESSV Antagonizes Binding of U2AF65 to Viral Polypyrimidine Tracts
-
DOI 10.1128/MCB.23.23.8762-8772.2003
-
Domsic, J. K., Y. Wang, A. Mayeda, A. R. Krainer and C. M. Stoltzfus: Human immunodeficiency virus type 1 hnRNP A/B-dependent exonic splicing silencer ESSV antagonizes binding of U2AF65 to viral polypyrimidine tracts. Mol Cell Biol, 23, 8762-72 (2003). (Pubitemid 37433377)
-
(2003)
Molecular and Cellular Biology
, vol.23
, Issue.23
, pp. 8762-8772
-
-
Domsic, J.K.1
Wang, Y.2
Mayeda, A.3
Krainer, A.R.4
Stoltzfus, C.M.5
-
51
-
-
27444437305
-
Dual effect of the SR proteins ASF/SF2, SC35 and 9G8 on HIV-1 RNA splicing and virion production
-
Jacquenet, S., D. Decimo, D. Muriaux and J. L. Darlix: Dual effect of the SR proteins ASF/SF2, SC35 and 9G8 on HIV-1 RNA splicing and virion production. Retrovirology, 2, 33 (2005).
-
(2005)
Retrovirology
, vol.2
, pp. 33
-
-
Jacquenet, S.1
Decimo, D.2
Muriaux, D.3
Darlix, J.L.4
-
52
-
-
36048971595
-
Small-molecule inhibition of HIV pre-mRNA splicing as a novel antiretroviral therapy to overcome drug resistance
-
DOI 10.1371/journal.ppat.0030159
-
Bakkour, N., Y. L. Lin, S. Maire, L. Ayadi, F. Mahuteau-Betzer, C. H. Nguyen, C. Mettling, P. Portales, D. Grierson, B. Chabot, P. Jeanteur, C. Branlant, P. Corbeau and J. Tazi: Small-molecule inhibition of HIV premRNA splicing as a novel antiretroviral therapy to overcome drug resistance. PLoS Pathog, 3, 1530-9 (2007). (Pubitemid 350085616)
-
(2007)
PLoS Pathogens
, vol.3
, Issue.10
, pp. 1530-1539
-
-
Bakkour, N.1
Lin, Y.-L.2
Maire, S.3
Ayadi, L.4
Mahuteau-Betzer, F.5
Chi, H.N.6
Mettling, C.7
Portales, P.8
Grierson, D.9
Chabot, B.10
Jeanteur, P.11
Branlant, C.12
Corbeau, P.13
Tazi, J.14
-
53
-
-
14644431487
-
Broad Specificity of SR (Serine{plus 45 degree rule}Arginine) Proteins in the Regulation of Alternative Splicing of Pre-Messenger RNA
-
DOI 10.1016/S0079-6603(04)78002-2, PII S0079660304780022
-
Bourgeois, C. F., F. Lejeune and J. Stevenin: Broad specificity of SR (serine/arginine) proteins in the regulation of alternative splicing of pre-messenger RNA. Prog Nucleic Acid Res Mol Biol, 78, 37-88 (2004). (Pubitemid 39753917)
-
(2004)
Progress in Nucleic Acid Research and Molecular Biology
, vol.78
, pp. 37-88
-
-
Bourgeois, C.F.1
Lejeune, F.2
Stevenin, J.3
-
54
-
-
1842635464
-
Regulation of alternative RNA splicing by exon definition and exon sequences in viral and mammalian gene expression
-
Zheng, Z. M.: Regulation of alternative RNA splicing by exon definition and exon sequences in viral and mammalian gene expression. J Biomed Sci, 11, 278-94 (2004).
-
(2004)
J Biomed Sci
, vol.11
, pp. 278-294
-
-
Zheng, Z.M.1
-
55
-
-
0029064220
-
The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities
-
Tacke, R. and J. L. Manley: The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities. EMBO J., 14, 3540-51 (1995).
-
(1995)
EMBO J
, vol.14
, pp. 3540-3551
-
-
Tacke, R.1
Manley, J.L.2
-
56
-
-
33747891736
-
An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers
-
DOI 10.1093/hmg/ddl171
-
Smith, P. J., C. Zhang, J. Wang, S. L. Chew, M. Q. Zhang and A. R. Krainer: An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers. Hum Mol Genet, 15, 2490-508 (2006). (Pubitemid 44288702)
-
(2006)
Human Molecular Genetics
, vol.15
, Issue.16
, pp. 2490-2508
-
-
Smith, P.J.1
Zhang, C.2
Wang, J.3
Chew, S.L.4
Zhang, M.Q.5
Krainer, A.R.6
-
57
-
-
0029025083
-
Presence of exon splicing silencers within human immunodeficiency virus type 1 tat exon 2 and tat-rev exon 3: Evidence for inhibition mediated by cellular factors
-
Amendt, B. A., Z. H. Si and C. M. Stoltzfus: Presence of exon splicing silencers within human immunodeficiency virus type 1 tat exon 2 and tat-rev exon 3: evidence for inhibition mediated by cellular factors. Mol Cell Biol, 15, 4606-15 (1995).
-
(1995)
Mol Cell Biol
, vol.15
, pp. 4606-4615
-
-
Amendt, B.A.1
Si, Z.H.2
Stoltzfus, C.M.3
-
58
-
-
0027294031
-
HnRNP proteins and the biogenesis of mRNA
-
Dreyfuss, G., M. J. Matunis, S. Pinol-Roma and C. G. Burd: hnRNP proteins and the biogenesis of mRNA. Annu. Rev. Biochem., 62, 289-321 (1993). (Pubitemid 23237873)
-
(1993)
Annual Review of Biochemistry
, vol.62
, pp. 289-321
-
-
Dreyfuss, G.1
Matunis, M.J.2
Pinol-Roma, S.3
Burd, C.G.4
-
59
-
-
0029896047
-
HnRNP A1 selectively interacts through its Gly-rich domain with different RNA-binding proteins
-
DOI 10.1006/jmbi.1996.0324
-
Cartegni, L., M. Maconi, E. Morandi, F. Cobianchi, S. Riva and G. Biamonti: hnRNP A1 selectively interacts through its Gly-rich domain with different RNA-binding proteins. J Mol Biol, 259, 337-48 (1996). (Pubitemid 26179016)
-
(1996)
Journal of Molecular Biology
, vol.259
, Issue.3
, pp. 337-348
-
-
Cartegni, L.1
Maconi, M.2
Morandi, E.3
Cobianchi, F.4
Riva, S.5
Biamonti, G.6
-
60
-
-
0027481140
-
Mammalian heterogeneous ribonucleoprotein A1 and its constituent domains. Nucleic acid interaction, structural stability and self-association
-
DOI 10.1006/jmbi.1993.1093
-
Casas-Finet, J. R., J. D. Smith, Jr., A. Kumar, J. G. Kim, S. H. Wilson and R. L. Karpel: Mammalian heterogeneous ribonucleoprotein A1 and its constituent domains. Nucleic acid interaction, structural stability and self-association. J Mol Biol, 229, 873-89 (1993). (Pubitemid 23091809)
-
(1993)
Journal of Molecular Biology
, vol.229
, Issue.4
, pp. 873-889
-
-
Casas-Finet, J.R.1
Smith Jr., J.D.2
Kumar, A.3
Kim, J.G.4
Wilson, S.H.5
Karpel, R.L.6
-
61
-
-
21044438900
-
Multiple roles of arginine/serine-rich splicing factors in RNA processing
-
DOI 10.1042/BST0330443
-
Sanford, J. R., J. Ellis and J. F. Caceres: Multiple roles of arginine/serine-rich splicing factors in RNA processing. Biochem Soc Trans, 33, 443-6 (2005). (Pubitemid 40873861)
-
(2005)
Biochemical Society Transactions
, vol.33
, Issue.3
, pp. 443-446
-
-
Sanford, J.R.1
Ellis, J.2
Caceres, J.F.3
-
62
-
-
14644445227
-
SRprises along a messenger's journey
-
DOI 10.1016/j.molcel.2005.02.020
-
Huang, Y. and J. A. Steitz: SRprises along a messenger's journey. Mol Cell, 17, 613-5 (2005). (Pubitemid 40320911)
-
(2005)
Molecular Cell
, vol.17
, Issue.5
, pp. 613-615
-
-
Huang, Y.1
Steitz, J.A.2
-
63
-
-
0028303171
-
Presence of negative and positive cis-acting RNA splicing elements within and flanking the first tat coding exon of human immunodeficiency virus type 1
-
Amendt, B. A., D. Hesslein, L. J. Chang and C. M. Stoltzfus: Presence of negative and positive cis-acting RNA splicing elements within and flanking the first tat coding exon of human immunodeficiency virus type 1. Mol Cell Biol, 14, 3960-70 (1994). (Pubitemid 24160802)
-
(1994)
Molecular and Cellular Biology
, vol.14
, Issue.6
, pp. 3960-3970
-
-
Amendt, B.A.1
Hesslein, D.2
Chang, L.-J.3
Stoltzfus, C.M.4
-
64
-
-
0033013977
-
Substrate specificities of SR proteins in constitutive splicing are determined by their RNA recognition motifs and composite pre-mRNA exonic elements
-
Mayeda, A., G. R. Screaton, S. D. Chandler, X. D. Fu and A. R. Krainer: Substrate specificities of SR proteins in constitutive splicing are determined by their RNA recognition motifs and composite pre-mRNA exonic elements. Mol. Cell. Biol., 19, 1853-63 (1999). (Pubitemid 29098243)
-
(1999)
Molecular and Cellular Biology
, vol.19
, Issue.3
, pp. 1853-1863
-
-
Mayeda, A.1
Screaton, G.R.2
Chandler, S.D.3
Fu, X.-D.4
Krainer, A.R.5
-
65
-
-
0036237290
-
Positive and negative modulation of human immunodeficiency virus type 1 Rev function by cis and trans regulators of viral RNA splicing
-
DOI 10.1128/JVI.76.10.5108-5120.2002
-
Pongoski, J., K. Asai and A. Cochrane: Positive and negative modulation of human immunodeficiency virus type 1 Rev function by cis and trans regulators of viral RNA splicing. J Virol, 76, 5108-20 (2002). (Pubitemid 34441715)
-
(2002)
Journal of Virology
, vol.76
, Issue.10
, pp. 5108-5120
-
-
Pongoski, J.1
Asai, K.2
Cochrane, A.3
-
66
-
-
34248212743
-
HnRNP E1 and E2 have distinct roles in modulating HIV-1 gene expression
-
Woolaway, K., K. Asai, A. Emili and A. Cochrane: hnRNP E1 and E2 have distinct roles in modulating HIV-1 gene expression. Retrovirology, 4, 28 (2007).
-
(2007)
Retrovirology
, vol.4
, pp. 28
-
-
Woolaway, K.1
Asai, K.2
Emili, A.3
Cochrane, A.4
-
67
-
-
41949126553
-
Negative and positive mRNA splicing elements act competitively to regulate human immunodeficiency virus type 1 Vif gene expression
-
DOI 10.1128/JVI.01558-07
-
Exline, C. M., Z. Feng and C. M. Stoltzfus: Negative and positive mRNA splicing elements act competitively to regulate human immunodeficiency virus type 1 vif gene expression. J Virol, 82, 3921-31 (2008). (Pubitemid 351521229)
-
(2008)
Journal of Virology
, vol.82
, Issue.8
, pp. 3921-3931
-
-
Exline, C.M.1
Feng, Z.2
Stoltzfus, C.M.3
-
68
-
-
0033762534
-
Selection of alternative 5' splice sites: Role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1
-
Eperon, I. C., O. V. Makarova, A. Mayeda, S. H. Munroe, J. F. Caceres, D. G. Hayward and A. R. Krainer: Selection of alternative 5' splice sites: role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1. Mol Cell Biol, 20, 8303-18 (2000).
-
(2000)
Mol Cell Biol
, vol.20
, pp. 8303-8318
-
-
Eperon, I.C.1
Makarova, O.V.2
Mayeda, A.3
Munroe, S.H.4
Caceres, J.F.5
Hayward, D.G.6
Krainer, A.R.7
-
69
-
-
41049087051
-
HIV-1 infection induces changes in expression of cellular splicing factors that regulate alternative viral splicing and virus production in macrophages
-
Dowling, D., S. Nasr-Esfahani, C. H. Tan, K. O'Brien, J. L. Howard, D. A. Jans, D. F. Purcell, C. M. Stoltzfus and S. Sonza: HIV-1 infection induces changes in expression of cellular splicing factors that regulate alternative viral splicing and virus production in macrophages. Retrovirology, 5, 18 (2008).
-
(2008)
Retrovirology
, vol.5
, pp. 18
-
-
Dowling, D.1
Nasr-Esfahani, S.2
Tan, C.H.3
O'brien, K.4
Howard, J.L.5
Jans, D.A.6
Purcell, D.F.7
Stoltzfus, C.M.8
Sonza, S.9
-
70
-
-
0031906238
-
The expression of the essential nuclear splicing factor SC35 is altered by human immunodeficiency virus infection
-
DOI 10.1016/S0168-1702(97)00130-5, PII S0168170297001305
-
Maldarelli, F., C. Xiang, G. Chamoun and S. L. Zeichner: The expression of the essential nuclear splicing factor SC35 is altered by human immunodeficiency virus infection. Virus Res, 53, 39-51. (1998). (Pubitemid 28127843)
-
(1998)
Virus Research
, vol.53
, Issue.1
, pp. 39-51
-
-
Maldarelli, F.1
Xiang, C.2
Chamoun, G.3
Zeichner, S.L.4
-
71
-
-
0034234459
-
Identification and characterization of differentially expressed mRNAs in HIV type 1-infected human T cells
-
DOI 10.1089/08892220050058416
-
Ryo, A., Y. Suzuki, M. Arai, N. Kondoh, T. Wakatsuki, A. Hada, M. Shuda, K. Tanaka, C. Sato, M. Yamamoto and N. Yamamoto: Identification and characterization of differentially expressed mRNAs in HIV type 1-infected human T cells. AIDS Res Hum Retroviruses, 16, 995-1005 (2000). (Pubitemid 30436498)
-
(2000)
AIDS Research and Human Retroviruses
, vol.16
, Issue.10
, pp. 995-1005
-
-
Ryo, A.1
Suzuki, Y.2
Arai, M.3
Kondoh, N.4
Wakatsuki, T.5
Hada, A.6
Shuda, M.7
Tanaka, K.8
Sato, C.9
Yamamoto, M.10
Yamamoto, N.11
-
72
-
-
33746606369
-
Utilization of host SR protein kinases and RNA-splicing machinery during viral replication
-
DOI 10.1073/pnas.0604616103
-
Fukuhara, T., T. Hosoya, S. Shimizu, K. Sumi, T. Oshiro, Y. Yoshinaka, M. Suzuki, N. Yamamoto, L. A. Herzenberg and M. Hagiwara: Utilization of host SR protein kinases and RNA-splicing machinery during viral replication. Proc Natl Acad Sci U S A, 103, 11329-33 (2006). (Pubitemid 44156517)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.30
, pp. 11329-11333
-
-
Fukuhara, T.1
Hosoya, T.2
Shimizu, S.3
Sumi, K.4
Oshiro, T.5
Yoshinaka, Y.6
Suzuki, M.7
Yamamoto, N.8
Herzenberg, L.A.9
Herzenberg, L.A.10
Hagiwara, M.11
-
73
-
-
0032516168
-
Regulation of adenovirus alternative RNA splicing by dephosphorylation of SR proteins
-
DOI 10.1038/30277
-
Kanopka, A., O. Muhlemann, S. Petersen-Mahrt, C. Estmer, C. Ohrmalm and G. Akusjarvi: Regulation of adenovirus alternative RNA splicing by dephosphorylation of SR proteins. Nature, 393, 185-7 (1998). (Pubitemid 28242261)
-
(1998)
Nature
, vol.393
, Issue.6681
, pp. 185-187
-
-
Kanopka, A.1
Muhlemann, O.2
Petersen-Mahrt, S.3
Estmer, C.4
Ohrmalm, C.5
Akusjarvl, G.6
-
74
-
-
0037387122
-
ICP27 interacts with SRPK1 to mediate HSV splicing inhibition by altering SR protein phosphorylation
-
DOI 10.1093/emboj/cdg166
-
Sciabica, K. S., Q. J. Dai and R. M. Sandri-Goldin: ICP27 interacts with SRPK1 to mediate HSV splicing inhibition by altering SR protein phosphorylation. EMBO J, 22, 1608-19 (2003). (Pubitemid 36417409)
-
(2003)
EMBO Journal
, vol.22
, Issue.7
, pp. 1608-1619
-
-
Sciabica, K.S.1
Dai, Q.J.2
Sandri-Goldin, R.M.3
-
75
-
-
34250313662
-
Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes
-
DOI 10.1074/jbc.M700774200
-
Schaub, M. C., S. R. Lopez and M. Caputi: Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes. J Biol Chem, 282, 13617-26 (2007). (Pubitemid 47100498)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.18
, pp. 13617-13626
-
-
Schaub, M.C.1
Lopez, S.R.2
Caputi, M.3
-
76
-
-
33244483620
-
Intronic binding sites for hnRNP A/B and hnRNP F/H proteins stimulate premRNA splicing
-
Martinez-Contreras, R., J. F. Fisette, F. U. Nasim, R. Madden, M. Cordeau and B. Chabot: Intronic binding sites for hnRNP A/B and hnRNP F/H proteins stimulate premRNA splicing. PLoS Biol, 4, e21 (2006).
-
(2006)
PLoS Biol
, vol.4
-
-
Martinez-Contreras, R.1
Fisette, J.F.2
Nasim, F.U.3
Madden, R.4
Cordeau, M.5
Chabot, B.6
-
77
-
-
0037083819
-
SR proteins and hnRNP H regulate the splicing of the HIV-1 tev-specific exon 6D
-
DOI 10.1093/emboj/21.4.845
-
Caputi, M. and A. M. Zahler: SR proteins and hnRNP H regulate the splicing of the HIV-1 tev-specific exon 6D. EMBO J, 21, 845-55 (2002). (Pubitemid 34174064)
-
(2002)
EMBO Journal
, vol.21
, Issue.4
, pp. 845-855
-
-
Caputi, M.1
Zahler, A.M.2
-
78
-
-
33947194178
-
Human immunodeficiency virus type 1 Vpr interacts with spliceosomal protein SAP145 to mediate cellular pre-mRNA splicing inhibition
-
DOI 10.1016/j.micinf.2007.01.013, PII S1286457907000457
-
Hashizume, C., M. Kuramitsu, X. Zhang, T. Kurosawa, M. Kamata and Y. Aida: Human immunodeficiency virus type 1 Vpr interacts with spliceosomal protein SAP145 to mediate cellular pre-mRNA splicing inhibition. Microbes Infect, 9, 490-7 (2007). (Pubitemid 46436550)
-
(2007)
Microbes and Infection
, vol.9
, Issue.4
, pp. 490-497
-
-
Hashizume, C.1
Kuramitsu, M.2
Zhang, X.3
Kurosawa, T.4
Kamata, M.5
Aida, Y.6
-
79
-
-
24944498529
-
A novel role for Vpr of human immunodeficiency virus type 1 as a regulator of the splicing of cellular pre-mRNA
-
DOI 10.1016/j.micinf.2005.03.022, PII S1286457905001127
-
Kuramitsu, M., C. Hashizume, N. Yamamoto, A. Azuma, M. Kamata, Y. Tanaka and Y. Aida: A novel role for Vpr of human immunodeficiency virus type 1 as a regulator of the splicing of cellular pre-mRNA. Microbes Infect, 7, 1150-60 (2005). (Pubitemid 41316688)
-
(2005)
Microbes and Infection
, vol.7
, Issue.9-10
, pp. 1150-1160
-
-
Kuramitsu, M.1
Hashizume, C.2
Yamamoto, N.3
Azuma, A.4
Kamata, M.5
Yamamoto, N.6
Tanaka, Y.7
Aida, Y.8
-
80
-
-
33947403113
-
New way of regulating alternative splicing in retroviruses: The promoter makes a difference
-
DOI 10.1128/JVI.02105-06
-
Bohne, J., A. Schambach and D. Zychlinski: New way of regulating alternative splicing in retroviruses: the promoter makes a difference. J Virol, 81, 3652-6 (2007). (Pubitemid 46456676)
-
(2007)
Journal of Virology
, vol.81
, Issue.7
, pp. 3652-3656
-
-
Bohne, J.1
Schambach, A.2
Zychlinski, D.3
-
81
-
-
0037044769
-
Transcriptional activators differ in their abilities to control alternative splicing
-
DOI 10.1074/jbc.M208418200
-
Nogues, G., S. Kadener, P. Cramer, D. Bentley and A. R. Kornblihtt: Transcriptional activators differ in their abilities to control alternative splicing. J Biol Chem, 277, 43110-4 (2002). (Pubitemid 35285694)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.45
, pp. 43110-43114
-
-
Nogues, G.1
Kadener, S.2
Cramer, P.3
Bentley, D.4
Kornblihtt, A.R.5
-
82
-
-
0035924345
-
Stimulatory effect of splicing factors on transcriptional elongation
-
DOI 10.1038/414929a
-
Fong, Y. W. and Q. Zhou: Stimulatory effect of splicing factors on transcriptional elongation. Nature, 414, 929-33 (2001). (Pubitemid 34024746)
-
(2001)
Nature
, vol.414
, Issue.6866
, pp. 929-933
-
-
Fong, Y.W.1
Zhou, Q.2
-
83
-
-
18844398607
-
A human splicing factor, SKIP, associates with P-TEFb and enhances transcription elongation by HIV-1 Tat
-
DOI 10.1101/gad.1291705
-
Bres, V., N. Gomes, L. Pickle and K. A. Jones: A human splicing factor, SKIP, associates with P-TEFb and enhances transcription elongation by HIV-1 Tat. Genes Dev, 19, 1211-26 (2005). (Pubitemid 40696187)
-
(2005)
Genes and Development
, vol.19
, Issue.10
, pp. 1211-1226
-
-
Bres, V.1
Gomes, N.2
Pickle, L.3
Jones, K.A.4
-
84
-
-
0033779574
-
Multiple blocks to human immunodeficiency virus type 1 replication in rodent cells
-
Bieniasz, P. D. and B. R. Cullen: Multiple blocks to human immunodeficiency virus type 1 replication in rodent cells. J Virol, 74, 9868-77 (2000).
-
(2000)
J Virol
, vol.74
, pp. 9868-9877
-
-
Bieniasz, P.D.1
Cullen, B.R.2
-
85
-
-
0032533253
-
The interaction between HIV-1 Tat and human cyclin T1 requires zinc and a critical cysteine residue that is not conserved in the murine CycT1 protein
-
Garber, M. E., P. Wei, V. N. KewalRamani, T. P. Mayall, C. H. Herrmann, A. P. Rice, D. R. Littman and K. A. Jones: The interaction between HIV-1 Tat and human cyclin T1 requires zinc and a critical cysteine residue that is not conserved in the murine CycT1 protein. Genes Dev, 12, 3512-27 (1998). (Pubitemid 28553243)
-
(1998)
Genes and Development
, vol.12
, Issue.22
, pp. 3512-3527
-
-
Garber, M.E.1
Wei, P.2
KewalRamani, V.N.3
Mayall, T.P.4
Herrmann, C.H.5
Rice, A.P.6
Littman, D.R.7
Jones, K.A.8
-
86
-
-
0037711776
-
Human p32 protein relieves a post-transcriptional block to HIV replication in murine cells
-
DOI 10.1038/ncb1000
-
Zheng, Y. H., H. F. Yu and B. M. Peterlin: Human p32 protein relieves a post-transcriptional block to HIV replication in murine cells. Nat Cell Biol, 5, 611-8 (2003). (Pubitemid 36818082)
-
(2003)
Nature Cell Biology
, vol.5
, Issue.7
, pp. 611-618
-
-
Zheng, Y.-H.1
Yu, H.-F.2
Peterlin, B.M.3
-
87
-
-
0033557708
-
The splicing factor-associated protein, p32, regulates RNA splicing by inhibiting ASF/SF2 RNA binding and phosphorylation
-
DOI 10.1093/emboj/18.4.1014
-
Petersen-Mahrt, S. K., C. Estmer, C. Ohrmalm, D. A. Matthews, W. C. Russell and G. Akusjarvi: The splicing factor-associated protein, p32, regulates RNA splicing by inhibiting ASF/SF2 RNA binding and phosphorylation. EMBO J, 18, 1014-24 (1999). (Pubitemid 29082280)
-
(1999)
EMBO Journal
, vol.18
, Issue.4
, pp. 1014-1024
-
-
Petersen-Mahrt, S.K.1
Estmer, C.2
Ohrmalm, C.3
Matthews, D.A.4
Russell, W.C.5
Akusjarvi, G.6
-
88
-
-
33646460096
-
Cellular splicing and transcription regulatory protein p32 represses adenovirus major late transcription and causes hyperphosphorylation of RNA polymerase II
-
Ohrmalm, C. and G. Akusjarvi: Cellular splicing and transcription regulatory protein p32 represses adenovirus major late transcription and causes hyperphosphorylation of RNA polymerase II. J Virol, 80, 5010-20 (2006).
-
(2006)
J Virol
, vol.80
, pp. 5010-5020
-
-
Ohrmalm, C.1
Akusjarvi, G.2
-
89
-
-
33645292647
-
Acetylated Tat regulates human immunodeficiency virus type 1 splicing through its interaction with the splicing regulator p32
-
Berro, R., K. Kehn, C. de la Fuente, A. Pumfery, R. Adair, J. Wade, A. M. Colberg-Poley, J. Hiscott and F. Kashanchi: Acetylated Tat regulates human immunodeficiency virus type 1 splicing through its interaction with the splicing regulator p32. J Virol, 80, 3189-204 (2006).
-
(2006)
J Virol
, vol.80
, pp. 3189-3204
-
-
Berro, R.1
Kehn, K.2
De La Fuente, C.3
Pumfery, A.4
Adair, R.5
Wade, J.6
Colberg-Poley, A.M.7
Hiscott, J.8
Kashanchi, F.9
-
90
-
-
0042671259
-
Acetylation of Tat defines a CyclinT1-independent step in HIV transactivation
-
DOI 10.1016/S1097-2765(03)00245-4
-
Kaehlcke, K., A. Dorr, C. Hetzer-Egger, V. Kiermer, P. Henklein, M. Schnoelzer, E. Loret, P. A. Cole, E. Verdin and M. Ott: Acetylation of Tat defines a cyclinT1-independent step in HIV transactivation. Mol Cell, 12, 167-76 (2003). (Pubitemid 36945045)
-
(2003)
Molecular Cell
, vol.12
, Issue.1
, pp. 167-176
-
-
Kaehlcke, K.1
Dorr, A.2
Hetzer-Egger, C.3
Kiermer, V.4
Henklein, P.5
Schnoelzer, M.6
Loret, E.7
Cole, P.A.8
Verdin, E.9
Ott, M.10
-
91
-
-
2942726545
-
Tat acetylation: A regulatory switch between early and late phases in HIV transcription elongation
-
discussion 193-6, 223-5
-
Ott, M., A. Dorr, C. Hetzer-Egger, K. Kaehlcke, M. Schnolzer, P. Henklein, P. Cole, M. M. Zhou and E. Verdin: Tat acetylation: a regulatory switch between early and late phases in HIV transcription elongation. Novartis Found Symp, 259, 182-93; discussion 193-6, 223-5 (2004).
-
(2004)
Novartis Found Symp
, vol.259
, pp. 182-193
-
-
Ott, M.1
Dorr, A.2
Hetzer-Egger, C.3
Kaehlcke, K.4
Schnolzer, M.5
Henklein, P.6
Cole, P.7
Zhou, M.M.8
Verdin, E.9
-
92
-
-
0038491212
-
Control of alternative pre-mRNA splicing by RNA pol II elongation: Faster is not always better
-
DOI 10.1080/1521654031000119830
-
Nogues, G., S. Kadener, P. Cramer, M. de la Mata, J. P. Fededa, M. Blaustein, A. Srebrow and A. R. Kornblihtt: Control of alternative pre-mRNA splicing by RNA Pol II elongation: faster is not always better. IUBMB Life, 55, 235-41 (2003). (Pubitemid 36842254)
-
(2003)
IUBMB Life
, vol.55
, Issue.4-5
, pp. 235-241
-
-
Nogues, G.1
Kadener, S.2
Cramer, P.3
De La Mata, M.4
Fededa, J.P.5
Blaustein, M.6
Srebrow, A.7
Kornblihtt, A.R.8
-
93
-
-
20844442133
-
Selective modification of alternative splicing by indole derivatives that target serine-arginine-rich protein splicing factors
-
DOI 10.1073/pnas.0409829102
-
Soret, J., N. Bakkour, S. Maire, S. Durand, L. Zekri, M. Gabut, W. Fic, G. Divita, C. Rivalle, D. Dauzonne, C. H. Nguyen, P. Jeanteur and J. Tazi: Selective modification of alternative splicing by indole derivatives that target serinearginine-rich protein splicing factors. Proc Natl Acad Sci U S A, 102, 8764-9 (2005). (Pubitemid 40862809)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.24
, pp. 8764-8769
-
-
Soret, J.1
Bakkour, N.2
Maire, S.3
Durand, S.4
Zekri, L.5
Gabut, M.6
Fic, W.7
Divita, G.8
Rivalle, C.9
Dauzonne, D.10
Nguyen, C.H.11
Jeanteur, P.12
Tazi, J.13
-
94
-
-
34249005370
-
7 snRNA inducing Tat and Rev exon skipping
-
DOI 10.1002/jgm.1027
-
Asparuhova, M. B., G. Marti, S. Liu, F. Serhan, D. Trono and D. Schumperli: Inhibition of HIV-1 multiplication by a modified U7 snRNA inducing Tat and Rev exon skipping. J Gene Med, 9, 323-34 (2007). (Pubitemid 46796578)
-
(2007)
Journal of Gene Medicine
, vol.9
, Issue.5
, pp. 323-334
-
-
Asparuhova, M.B.1
Marti, G.2
Liu, S.3
Serhan, F.4
Trono, D.5
Schumperli, D.6
-
95
-
-
0026668171
-
The role of the tnv protein and tnv RNA splicing signals in replication of HIV-1 IIIB isolates
-
Gottlinger, H. G., T. Dorfman, E. A. Cohen and W. A. Haseltine: The role of the tnv protein and tnv RNA splicing signals in replication of HIV-1 IIIB isolates. Virology, 189, 618-28 (1992).
-
(1992)
Virology
, vol.189
, pp. 618-628
-
-
Gottlinger, H.G.1
Dorfman, T.2
Cohen, E.A.3
Haseltine, W.A.4
-
96
-
-
0028999992
-
Identification of positive and negative splicing regulatory elements within the terminal tat-rev exon of human immunodeficiency virus type 1
-
Staffa, A. and A. Cochrane: Identification of positive and negative splicing regulatory elements within the terminal tat-rev exon of human immunodeficiency virus type 1. Mol Cell Biol, 15, 4597-605 (1995).
-
(1995)
Mol Cell Biol
, vol.15
, pp. 4597-4605
-
-
Staffa, A.1
Cochrane, A.2
|