SCOPUS 정보 검색 플랫폼

Chemical Communications

Volumn , Issue 15, 2009, Pages 2017-2019

A conformational transition in the structure of a 2′-thiomethyl- modified DNA visualized at high resolution

(6) Pallan, Pradeep S a Prakash, Thazha P b Li, Feng a Eoff, Robert L a Manoharan, Muthiah c Egli, Martin a

a VANDERBILT UNIVERSITY SCHOOL OF MEDICINE (United States)

b ISIS PHARMACEUTICALS (United States)

c ALNYLAM PHARMACEUTICALS (United States)

Author keywords

[No Author keywords available]

Indexed keywords

2' THIOMETHYL URIDINE DERIVATIVE; DNA; DOUBLE STRANDED DNA; NUCLEOSIDE; OLIGONUCLEOTIDE; OXYGEN; RNA; SULFUR; UNCLASSIFIED DRUG; URIDINE DERIVATIVE;

ARTICLE; CONFORMATIONAL TRANSITION; CRYSTAL STRUCTURE; MOLECULAR DYNAMICS; MOLECULAR INTERACTION; RNA BINDING; STRUCTURE ANALYSIS;

EID: 63849110013 PISSN: 13597345 EISSN: None Source Type: Journal
DOI: 10.1039/b822781k Document Type: Article

Times cited : (18)

References (37)

1
- 0003417547
- Uppsala University Press, Uppsala, SE
- C. Thibaudeau, P. Acharya and J. Chattopadhyaya, Stereoelectronic Effects in Nucleosides and Nucleotides and Their Structural Implications, Uppsala University Press, Uppsala, SE, 1999
- (1999) Stereoelectronic Effects in Nucleosides and Nucleotides and Their Structural Implications
- Thibaudeau, C.¹ Acharya, P.² Chattopadhyaya, J.³

2
- 0015511563
- -8212
- C. Altona M. Sundaralingam J. Am. Chem. Soc. 1972 94 8205 8212
- (1972) J. Am. Chem. Soc. , vol.94 , pp. 8205
- Altona, C.¹ Sundaralingam, M.²

3
- 5444275289
- -1762
- G. Sun J. H. Voigt I. V. Fillippov V. E. Marquez M. C. Nicklaus J. Chem. Inf. Comput. Sci. 2004 44 1752 1762
- (2004) J. Chem. Inf. Comput. Sci. , vol.44 , pp. 1752
- Sun, G.¹ Voigt, J.H.² Fillippov, I.V.³ Marquez, V.E.⁴ Nicklaus, M.C.⁵

4
- 85013906866
- Academic Press, London, UK
- S. Neidle, Principles of Nucleic Acid Structure, Academic Press, London, UK, 2008
- (2008) Principles of Nucleic Acid Structure
- Neidle, S.¹

5
- 0033562547
- -2195
- D. Venkateswarlu K. E. Lind V. Mohan M. Manoharan D. M. Ferguson Nucleic Acids Res. 1999 27 2189 2195
- (1999) Nucleic Acids Res. , vol.27 , pp. 2189
- Venkateswarlu, D.¹ Lind, K.E.² Mohan, V.³ Manoharan, M.⁴ Ferguson, D.M.⁵

6
- 0028500180
- -45
- P. Lubini W. Zürcher M. Egli Chem. Biol. 1994 1 39 45
- (1994) Chem. Biol. , vol.1 , pp. 39
- Lubini, P.¹ Zürcher, W.² Egli, M.³

7
- 0030726858
- -4607
- D. A. Adamiak J. Milecki M. Popenda R. W. Adamiak Z. Dauter W. R. Rypniewski Nucleic Acids Res. 1997 25 4599 4607
- (1997) Nucleic Acids Res. , vol.25 , pp. 4599
- Adamiak, D.A.¹ Milecki, J.² Popenda, M.³ Adamiak, R.W.⁴ Dauter, Z.⁵ Rypniewski, W.R.⁶

8
- 0031900834
- -128
- M. Egli Antisense Nucleic Acid Drug Dev. 1998 8 123 128
- (1998) Antisense Nucleic Acid Drug Dev. , vol.8 , pp. 123
- Egli, M.¹

9
- 0032750621
- -130
- M. Manoharan Biochim. Biophys. Acta 1999 1489 117 130
- (1999) Biochim. Biophys. Acta , vol.1489 , pp. 117
- Manoharan, M.¹

10
- 8844262560
- -579
- M. Manoharan Curr. Opin. Chem. Biol. 2004 8 570 579
- (2004) Curr. Opin. Chem. Biol. , vol.8 , pp. 570
- Manoharan, M.¹

11
- 0027479864
- -841
- A. M. Kawasaki M. D. Casper S. M. Freier E. A. Lesnik M. C. Zounes L. L. Cummins C. Gonzalez P. D. Cook J. Med. Chem. 1993 36 831 841
- (1993) J. Med. Chem. , vol.36 , pp. 831
- Kawasaki, A.M.¹ Casper, M.D.² Freier, S.M.³ Lesnik, E.A.⁴ Zounes, M.C.⁵ Cummins, L.L.⁶ Gonzalez, C.⁷ Cook, P.D.⁸

12
- 0033053332
- -539
- M. Teplova G. Minasov V. Tereshko G. Inamati P. D. Cook M. Manoharan M. Egli Nat. Struct. Biol. 1999 6 535 539
- (1999) Nat. Struct. Biol. , vol.6 , pp. 535
- Teplova, M.¹ Minasov, G.² Tereshko, V.³ Inamati, G.⁴ Cook, P.D.⁵ Manoharan, M.⁶ Egli, M.⁷

13
- 0031055109
- -29
- J. J. Barchi, Jr L. S. Jeong M. A. Siddiqui V. E. Marquez J. Biochem. Biophys. Methods 1997 34 11 29
- (1997) J. Biochem. Biophys. Methods , vol.34 , pp. 11
- Barchi Jr, J.J.¹ Jeong, L.S.² Siddiqui, M.A.³ Marquez, V.E.⁴

14
- 0032524080
- -2480
- I. Berger V. Tereshko H. Ikeda V. E. Marquez M. Egli Nucleic Acids Res. 1998 26 2473 2480
- (1998) Nucleic Acids Res. , vol.26 , pp. 2473
- Berger, I.¹ Tereshko, V.² Ikeda, H.³ Marquez, V.E.⁴ Egli, M.⁵

15
- 0034603771
- -3532
- G. Minasov M. Teplova P. Nielsen J. Wengel M. Egli Biochemistry 2000 39 3525 3532
- (2000) Biochemistry , vol.39 , pp. 3525
- Minasov, G.¹ Teplova, M.² Nielsen, P.³ Wengel, J.⁴ Egli, M.⁵

16
- 0034817168
- -4903
- J.-F. Trempe C. J. Wilds A. Y. Denisov R. T. Pon M. J. Damha K. Gehring J. Am. Chem. Soc. 2001 123 4896 4903
- (2001) J. Am. Chem. Soc. , vol.123 , pp. 4896
- Trempe, J.-F.¹ Wilds, C.J.² Denisov, A.Y.³ Pon, R.T.⁴ Damha, M.J.⁵ Gehring, K.⁶

17
- 33645545684
- -4152
- F. Li S. Sarkhel C. J. Wilds Z. Wawrzak T. P. Prakash M. Manoharan M. Egli Biochemistry 2006 45 4141 4152
- (2006) Biochemistry , vol.45 , pp. 4141
- Li, F.¹ Sarkhel, S.² Wilds, C.J.³ Wawrzak, Z.⁴ Prakash, T.P.⁵ Manoharan, M.⁶ Egli, M.⁷

18
- 11844299660
- -28
- Z. Wu M. Maderia J. J. Barchi, Jr V. E. Marquez A. Bax Proc. Natl. Acad. Sci. U. S. A. 2005 102 24 28
- (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , pp. 24
- Wu, Z.¹ Maderia, M.² Barchi Jr, J.J.³ Marquez, V.E.⁴ Bax, A.⁵

19
- 0036009329
- -286
- M. Egli Chem. Biol. 2002 9 277 286
- (2002) Chem. Biol. , vol.9 , pp. 277
- Egli, M.¹

20
- 34347266627
- Curvature and Deformation of Nucleic Acids: Recent Advances, New Paradigms
- -109
- M. Egli V. Tereshko Curvature and Deformation of Nucleic Acids: Recent Advances, New Paradigms ACS Symp. Ser. 2004 884 87 109
- (2004) ACS Symp. Ser. , vol.884 , pp. 87
- Egli, M.¹ Tereshko, V.²

21
- 0029956116
- -8494
- M. Egli S. Portmann N. Usman Biochemistry 1996 35 8489 8494
- (1996) Biochemistry , vol.35 , pp. 8489
- Egli, M.¹ Portmann, S.² Usman, N.³

22
- 0033585580
- -471
- V. Tereshko G. Minasov M. Egli J. Am. Chem. Soc. 1999 121 470 471
- (1999) J. Am. Chem. Soc. , vol.121 , pp. 470
- Tereshko, V.¹ Minasov, G.² Egli, M.³

23
- 0032530555
- -11168
- W. K. Olson A. A. Gorin X. J. Lu L. M. Hock V. B. Zhurkin Proc. Natl. Acad. Sci. U. S. A. 1998 95 11163 11168
- (1998) Proc. Natl. Acad. Sci. U. S. A. , vol.95 , pp. 11163
- Olson, W.K.¹ Gorin, A.A.² Lu, X.J.³ Hock, L.M.⁴ Zhurkin, V.B.⁵

24
- 20544460658
- -398
- A. Sarai H. Kono Annu. Rev. Biophys. Biomol. Struct. 2005 34 379 398
- (2005) Annu. Rev. Biophys. Biomol. Struct. , vol.34 , pp. 379
- Sarai, A.¹ Kono, H.²

25
- 0027299690
- -3237
- M. Egli N. Usman A. Rich Biochemistry 1993 32 3221 3237
- (1993) Biochemistry , vol.32 , pp. 3221
- Egli, M.¹ Usman, N.² Rich, A.³

26
- 0019331504
- -758
- R. Wing H. Drew T. Takano C. Broka S. Tanaka K. Itakura R. E. Dickerson Nature 1980 287 755 758
- (1980) Nature , vol.287 , pp. 755
- Wing, R.¹ Drew, H.² Takano, T.³ Broka, C.⁴ Tanaka, S.⁵ Itakura, K.⁶ Dickerson, R.E.⁷

27
- 4344589884
- -36326
- W. F. Lima J. G. Nichols H. Wu T. P. Prakash M. T. Migawa T. K. Wyrzykiewicz B. Bhat S. T. Crooke J. Biol. Chem. 2004 279 36317 36326
- (2004) J. Biol. Chem. , vol.279 , pp. 36317
- Lima, W.F.¹ Nichols, J.G.² Wu, H.³ Prakash, T.P.⁴ Migawa, M.T.⁵ Wyrzykiewicz, T.K.⁶ Bhat, B.⁷ Crooke, S.T.⁸

28
- 0000560808
- -1025
- A. Vagin A. Teplyakov J. Appl. Crystallogr. 1997 30 1022 1025
- (1997) J. Appl. Crystallogr. , vol.30 , pp. 1022
- Vagin, A.¹ Teplyakov, A.²

29
- 0028103275
- -763
- Collaborative Computational Project Number 4 Acta Crystallogr., Sect. D: Biol. Crystallogr. 1994 50 760 763
- (1994) Acta Crystallogr., Sect. D: Biol. Crystallogr. , vol.50 , pp. 760

30
- 0037045231
- -25
- Q. Du N. Carasco M. Teplova C. J. Wilds X. Kong M. Egli Z. Huang J. Am. Chem. Soc. 2002 124 24 25
- (2002) J. Am. Chem. Soc. , vol.124 , pp. 24
- Du, Q.¹ Carasco, N.² Teplova, M.³ Wilds, C.J.⁴ Kong, X.⁵ Egli, M.⁶ Huang, Z.⁷

31
- 0036761115
- -858
- M. Teplova C. J. Wilds Z. Wawrzak V. Tereshko Q. Du N. Carrasco Z. Huang M. Egli Biochimie 2002 84 849 858
- (2002) Biochimie , vol.84 , pp. 849
- Teplova, M.¹ Wilds, C.J.² Wawrzak, Z.³ Tereshko, V.⁴ Du, Q.⁵ Carrasco, N.⁶ Huang, Z.⁷ Egli, M.⁸

32
- 34347271702
- -651
- P. S. Pallan M. Egli Nat. Protocols 2007 2 647 651
- (2007) Nat. Protocols , vol.2 , pp. 647
- Pallan, P.S.¹ Egli, M.²

33
- 49749102062
- -2569
- P. S. Pallan M. Egli Cell Cycle 2008 7 2562 2569
- (2008) Cell Cycle , vol.7 , pp. 2562
- Pallan, P.S.¹ Egli, M.²

34
- 3543012707
- -921
- A. T. Brünger P. D. Adams G. M. Clore W. L. DeLano P. Gros R. W. Grosse-Kunstleve J. S. Jiang J. Kuszewski M. Nilges N. S. Pannu R. J. Read L. M. Rice T. Simonson G. L. Warren Acta Crystallogr. Sect. D: Biol. Crystallogr. 1998 54 905 921
- (1998) Acta Crystallogr. Sect. D: Biol. Crystallogr. , vol.54 , pp. 905
- Brünger, A.T.¹ Adams, P.D.² Clore, G.M.³ Delano, W.L.⁴ Gros, P.⁵ Grosse-Kunstleve, R.W.⁶ Jiang, J.S.⁷ Kuszewski, J.⁸ Nilges, M.⁹ Pannu, N.S.¹⁰ Read, R.J.¹¹ Rice, L.M.¹² Simonson, T.¹³ Warren, G.L.¹⁴

35
- 0030880598
- -343
- G. M. Sheldrick T. R. Schneider Methods Enzymol. 1997 277 319 343
- (1997) Methods Enzymol. , vol.277 , pp. 319
- Sheldrick, G.M.¹ Schneider, T.R.²

36
- 0024539180
- -667
- R. Lavery H. Sklenar J. Biomol. Struct. Dyn. 1989 6 655 667
- (1989) J. Biomol. Struct. Dyn. , vol.6 , pp. 655
- Lavery, R.¹ Sklenar, H.²

37
- 0025947116
- -19078
- C. R. Aiken L. W. McLaughlin R. I. Gumport J. Biol. Chem. 1991 266 19070 19078
- (1991) J. Biol. Chem. , vol.266 , pp. 19070
- Aiken, C.R.¹ McLaughlin, L.W.² Gumport, R.I.³

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.