Application of atmospheric pressure matrix-assisted laser desorption/ionization mass spectrometry for rapid identification of Neisseria species

Journal of Biomolecular Techniques

Volumn 19, Issue 3, 2008, Pages 200-204

  Gudlavalleti, Seshu K ^a   Sundaram, Appavu K ^a   Razumovski, Jane ^a   Doroshenko, Vladimir ^a  

^a Science and Engineering Services Inc   (United States)

Author keywords

Atmospheric pressure MALDI; Biomarkers; MS MS; Neisseria

Indexed keywords

BACTERIAL PROTEIN; PEPTIDE FRAGMENT; PROTEOME; TRYPSIN;

AMINO ACID SEQUENCE; ARTICLE; ATMOSPHERIC PRESSURE; BIOTECHNOLOGY; CHEMISTRY; CLASSIFICATION; EVALUATION; GENETICS; HUMAN; ISOLATION AND PURIFICATION; MASS SPECTROMETRY; METHODOLOGY; MOLECULAR GENETICS; NEISSERIA; NEISSERIA GONORRHOEAE; NEISSERIA MENINGITIDIS; PROTEOMICS; SEROTYPING; SPECIES DIFFERENCE; TANDEM MASS SPECTROMETRY;

AMINO ACID SEQUENCE; ATMOSPHERIC PRESSURE; BACTERIAL PROTEINS; BIOTECHNOLOGY; HUMANS; MOLECULAR SEQUENCE DATA; NEISSERIA; NEISSERIA GONORRHOEAE; NEISSERIA MENINGITIDIS; PEPTIDE FRAGMENTS; PROTEOME; PROTEOMICS; SEROTYPING; SPECIES SPECIFICITY; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; TANDEM MASS SPECTROMETRY; TRYPSIN;

EID: 63449093875     PISSN: 15240215     EISSN: 19434731     Source Type: Journal    
DOI: None     Document Type: Article

References (28)

1. Fenselau C, Demirev PA. Characterization of intact microorganisms by MALDI mass spectrometry. Mass Spectrom Rev 2001;20:157-171.
2. van Baar BL. Characterisation of bacteria by matrix-assisted laser desorption/ionisation and electrospray mass spectrometry. FEMS Microbiol Rev 2000;24:193-219.
3. Pribil PA, Patton E, Black G, Doroshenko V, Fenselau C. Rapid characterization of Bacillus spores targeting species-unique peptides produced with an atmospheric pressure matrix- assisted laser desorption/ionization source. J Mass Spectrom 2005;40:464-474.
4. Tan PV, Taranenko NI, Laiko VV, Yakshin MA, Prasad CR, Doroshenko VM. Mass spectrometry of N-linked oligosaccharides using atmospheric pressure infrared laser ionization from solution. J Mass Spectrom 2004;39:913-921.
5. Tzeng YL, Stephens DS. Epidemiology and pathogenesis of Neisseria meningitidis. Microbes Infect 2000;2:687-700.
6. Gerbase AC, Rowley JT, Heymann DH, Berkley SF, Piot P. Global prevalence and incidence estimates of selected curable STDs. Sex Transm Infect 1998;74 (Suppl 1):S12-S16.
7. Alexander S, Ison C. Evaluation of commercial kits for the identification of Neisseria gonorrhoeae. J Med Microbiol 2005;54:827-831.
8. de Filippis I, do Nascimento CR, Clementino MB, et al. Rapid detection of Neisseria meningitidis in cerebrospinal fluid by one- step polymerase chain reaction of the nspA gene. Diagn Micro- biol Infect Dis 2005;51:85-90.
9. Atobe JH, Hirata MH, Hoshino-Shimizu S, Schmal MR, Mamizuka EM. One-step heminested PCR for amplification of I DNA in cerebrospinal fluid. J Clin Lab Anal 2000;14:193-199.
10. Hall LM, Duke B, Urwin G. An approach to the identification of the pathogens of bacterial meningitis by the polymerase chain reaction. Eur J Clin Microbiol Infect Dis 1995;14:1090-1094.
11. Diggle MA, Clarke SC. Detection and genotyping of meningococci using a nested PCR approach. J Med Microbiol 2003;52:51-57.
12. Lansac N, Picard FJ, Menard C, et al. Novel genus-specific PCR-based assays for rapid identification of Neisseria species and Neisseria meningitidis. Eur J Clin Microbiol Infect Dis 2000;19:443-451.
13. Guiver M, Borrow R, Marsh J, et al. Evaluation of the Applied Biosystems automated Taqman polymerase chain reaction system for the detection of meningococcal DNA. FEMS Immunol Med Microbiol 2000;28:173-179.
14. Whiley DM, Tapsall JW, Sloots TP. Nucleic acid amplification testing for Neisseria gonorrhoeae: an ongoing challenge. J Mol Diagn 2006;8:3-15.
15. Warscheid B, Fenselau C. A targeted proteomics approach to the rapid identification of bacterial cell mixtures by matrixassisted laser desorption/ionization mass spectrometry. Proteom- ics 2004;4:2877-2892.
16. Tan PV, Laiko VV, Doroshenko VM. Atmospheric pressure MALDI with pulsed dynamic focusing for high-efficiency transmission of ions into a mass spectrometer. Anal Chem 2004;76:2462-2469.
17. Brockman AH, Dodd BS, Orlando R. A desalting approach for MALDI-MS using on-probe hydrophobic self-assembled monolayers. Anal Chem 1997;69:4716-4720.
18. Brockman AH, Shah NN, Orlando R. Optimization of a hydrophobic solid-phase extraction interface for matrix-assisted laser desorption/ionization. J Mass Spectrom 1998;33:1141-1147.
19. Warscheid B, Jackson K, Sutton C, Fenselau C. MALDI analysis of Bacilli in spore mixtures by applying a quadrupole ion trap time-of-flight tandem mass spectrometer. Anal Chem 2003;75:5608-5617.
20. Warscheid B, Fenselau C. Characterization of Bacillus spore species and their mixtures using postsource decay with a curvedfield reflectron. Anal Chem 2003;75:5618-5627.
21. Pleissner KP, Eifert T, Buettner S, et al. Web-accessible proteome databases for microbial research. Proteomics 2004;4:1305-1313.
22. Bumann D, Jungblut PR, Meyer TF. Helicobacter pylori vaccine development based on combined subproteome analysis. Proteomics 2004;4:2843-2848.
23. Vandahl BB, Birkelund S, Christiansen G. Genome and proteome analysis of Chlamydia. Proteomics 2004;4:2831-2842.
24. Marques MA, Espinosa BJ, Xavier da Silveira EK, et al. Continued proteomic analysis of Mycobacterium leprae subcellular fractions. Proteomics 2004;4:2942-2953.
25. Schaumburg J, Diekmann O, Hagendorff P, et al. The cell wall subproteome of Listeria monocytogenes. Proteomics 2004;4:2991-3006.
26. Hubalek M, Hernychova L, Brychta M, Lenco J, Zechovska J, Stulik J. Comparative proteome analysis of cellular proteins extracted from highly virulent Francisella tularensis ssp. tularen- sis and less virulent F. tularensis ssp. holarctica and F. tularensis ssp. mediaasiatica. Proteomics 2004;4:3048-3060.
27. Post DM, Zhang D, Eastvold JS, Teghanemt A, Gibson BW, Weiss JP. Biochemical and functional characterization of membrane blebs purified from Neisseria meningitidis serogroup B. J Biol Chem 2005;280:38383-38394.
28. Abel A, Sanchez S, Arenas J, Criado MT, Ferreiros CM. Bioinformatic analysis of outer membrane proteome of Neisseria meningitidis and Neisseria lactamica. Int Microbiol 2007;10:5-11.