Variations in rDNA ITS of Czech Avmillavia species determined by PCR and HPLC

Mycological Research

Volumn 108, Issue 10, 2004, Pages 1153-1161

  Lochman, Jan ^a   Serý, Omar ^a   Jankovský, Libor ^b   Mikes, Vladimir ^a  

^a MASARYK UNIVERSITY   (Czech Republic)

^b MENDEL UNIVERSITY IN BRNO   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

POLYMERASE CHAIN REACTION;

ARMILLARIA; ARMILLARIA BOREALIS; ARMILLARIA CEPISTIPES; ARMILLARIA GALLICA; ARMILLARIA MELLEA; ARMILLARIA OSTOYAE; ARMILLARIA TABESCENS; MYXOGASTRIA;

EID: 6344280952     PISSN: 09537562     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0953756204000644     Document Type: Article

References (29)

1. Agustian, A., Mohammed, C., Guillaumin, J. J. & Botton, B. (1994) Discrimination of some African Armillaria species by isozyme electrophoretic analysis. New Phytologist 128: 135-143.
2. Antonín, V. (1988) Studies in annulate apecies of the genus Armillaria - II. Ecology and geographic distribution of Armillaria mellea (Vahl: Fr.) Kummer in Czechoslovakia. Acta Musei Moraviae 73: 115-121.
3. Bruhn, J. N., Johnson, T. E., Karr, A. L., Wetteroff, J. J. & Leininger, T. D. (1998) Identification of Armillaria field isolates using isozymes and mycelial growth characteristics. Mycopathologia 142: 89-96.
4. Chillali, M., Idder-Ighili, H., Guillaumin, J. J., Mohammed, C., Escarmant, B. L. & Botton, B. (1998a) Variation in the ITS and IGS regions of ribosomal DNA among the biological species of european Armillaria. Mycological Research 102: 533-540.
5. Chillali, M., Idderighili, H., Agustian, H. I., Guillaumin, J. J., Mohammed, C. & Botton, B. (1997) Species delimitation in the African Armillaria complex by analysis of the ribosomal DNA spacers. Journal of General and Applied Microbiology 43: 23-29.
6. Chillali, M., Wipf, D., Guillaumin, J. J., Mohammed, C. & Botton, B. (1998b) Delineation of the European Armillaria species based on the sequences of the internal transcribed spacer (Its) of ribosomal DNA. New Phytologist 138: 553-561.
7. Dunne, C. P., Glen, M., Tommerup, I. C., Shearer, B. L. & Hardy, G. E. S. J. (2002) Sequence variation in the rDNA ITS of Australian Armillaria species and intra-specific variation in A. luteo-bubalina. Australasian Plant Pathology 31: 241-251.
8. Guillaumin, J. J., Lung, B., Romagnesi, H., Marxmuller, H., Lamoure, D., Durrieu, G., Berthelay, S. & Mohammed, C. (1985) The systematics of the Armillaria-mellea complex - phytopathological consequences. European Journal of Forest Pathology 15: 268-277.
9. Guillaumin, J. J., Mohammed, C., Anselmi, N., Courtecuisse, R., Gregory, S. C., Holdenrieder, O., Intini, M., Lung, B., Marxmuller, H., Morrison, D., Rishbeth, J., Ttermorshuizen, A. J., Tirro, A. & Vandam, B. (1993) Geographical distribution and ecology of the Armillaria species in western Europe. European Journal of Forest Pathoology 23: 321-341.
10. Jankovskỳ, L. (2003) The evaluation of root rot impact on stability of secondary spruce stands in fertile stands on Drahany Highlands. Journal of Forest Science 22: 76-85.
11. Katz, E. D. & Dong, M. W. (1990) Rapid analysis and purification of polymerase chain-reaction products by high-performance liquid-chromatography. Biotechniques 8: 546-558.
12. Korhonen, K. (1978) Interfertility and clonal size in the Armillaria mellea complex. Karstenia 18: 31-42.
13. Marxmüller, H. (1982) Etude morphologique des Armillaria ss. str. a anneau. Bulletin de la Société Mycologique de France 98: 87-123.
14. Marxmüller, H. (1987) Quelques remarques complémentaires sur les Armillaires annelées. Bulletin de la Société Mycologique de France 103: 137-156.
15. Marxmüller, H. (1992) Some notes on the taxonomy and nomenclature of five European Armillaria species. Mycotaxon 44: 267-274.
16. McCartney, H. A., Foster, S. J., Fraaije, B. A. & Ward, E. (2003) Molecular diagnostics for fungal plant pathogens. Pest Management Science 59: 129-142.
17. Nei, M. & Li, W. H. (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of National Academy of Sciences, USA 76: 5269-5273.
18. Pegler, D. N. (2000) Taxonomy, nomenclature and description of Armillaria. In Armillaria Root Rot: biology and control of honey fungus (R. T. V. Fox, ed.): 81-93. Intercept, Andover.
19. Schulze, S. & Bahnweg, G. (1998a) Critical review of identification techniques for Armillaria spp. and Helerobasidion annosum root and butt rot diseases. Phytopathologische Zeitschrift 146: 61-72.
20. Schulze, S. & Bahnweg, G. (1998b) Identification of the genus Armillaria (Fr: Fr) Staude and Heterobasidion annosum (Fr.) Bref. in Norway spruce (Picea abies [L.] Karst.) and determination of clonal distribution of A. ostoyae-genotypes by molecular methods. Forstwissenschaftliches Centralblatt 117: 98-114.
21. Schulze, S., Bahnweg, G., Moller, E. M. & Sandermann, H. (1997a) Identification of the genus Armillaria by specific amplification of an rDNA-ITS fragment and evaluation of genetic variation within A. ostoyae by rDNA-RFLP and rapid analysis. European Journal of Forest Pathology 27: 225-239.
22. Schulze, S., Bahnweg, G., Tesche, M. & Sandermann, K. (1997b) Identification techniques for Armillaria spp. and Heterobasidion annosum root and butt rot diseases. Zeitschrift Fur Pflanzenkrankheiten und Pflanzenschutz 104: 433-451.
23. Shaw, C.G. & Kile, G. A. (1991) Armillaria Root Disease. [Agriculture Handbook No. 691. 91.] USDA Forest Service, Washington, DC.
24. Sierra, A. P., Whitehead, D. S. & Whitehead, M. P. (1999) Investigation of a PCR-based method for the routine identification of British Armillaria species. Mycological Research 103: 1631-1636.
25. Smith-White, J. L., Summerell, B. A., Gunn, L. V., Rinzin, C., Porter, C. & Burgess, L. W. (2002) Molecular detection and differentiation of Australian Armillaria species. Australasian Plant Pathology 31: 75-79.
26. Terashima, K., Cha, J. Y., Yajima, T., Igarashi, T. & Miura, K. (1998) Phylogenetic analysis of Japanese Armillaria based on the intergenic spacer (IGS) sequences of their ribosomal DNA. European Journal of Forest Pathology 28: 11-19.
27. Termoshuizen, A. & Arnolds, E. (1987) On the nomenclature of the European species of the Armillaria group. Mycotaxon 30: 101-116.
28. White, E. E., Dubetz, C. P., Cruickshank, M. G. & Morrison, D. J. (1998) DNA diagnostic for Armillaria species in British Columbia: within and between species variation in the IGS-1 and IGS-2 regions. Mycologia 90: 125-131.
29. White, T. J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: a guide to methods and application (T. J. White, M. Innis, D. H. Gelfand, J. J. Sninsky & M. A. Innis, eds): 315-322. Academic Press, San Diego.