Spike detection, characterization, and discrimination using feature analysis software written in LabVIEW

Computer Methods and Programs in Biomedicine

Volumn 76, Issue 3, 2004, Pages 239-251

  Stewart, C M ^a,c   Newlands, S D ^a   Perachio, A A ^a,b  

^a University of Texas Medical Branch School of Medicine   (United States)

^b UNIVERSITY OF TEXAS MEDICAL BRANCH   (United States)

^c JOHNS HOPKINS HOSPITAL   (United States)

Author keywords

Electrophysiology; LabVIEW; Spike discrimination; Stimulus response analysis; Vestibular

Indexed keywords

ALGEBRAIC COMBINATION; ELECTROPHYSIOLOGICAL RECORDING; EXTRACELLULAR RECORDING;

ALGEBRA; ALGORITHMS; CELLS; COMPUTER SOFTWARE; ELECTRIC POTENTIAL; MATHEMATICAL MODELS;

ELECTROPHYSIOLOGY;

ACCURACY; ACTION POTENTIAL; ARTICLE; COMPUTER ANALYSIS; COMPUTER PROGRAM; ELECTROPHYSIOLOGY; STIMULUS RESPONSE;

ACTION POTENTIALS; ALGORITHMS; ANIMALS; BEHAVIOR, ANIMAL; DISCRIMINATION (PSYCHOLOGY); ELECTRODES, IMPLANTED; ELECTROPHYSIOLOGY; EXTRACELLULAR FLUID; MACACA MULATTA; MICROELECTRODES; MODELS, NEUROLOGICAL; NEURONS; SIGNAL PROCESSING, COMPUTER-ASSISTED;

EID: 6344250673     PISSN: 01692607     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cmpb.2004.07.001     Document Type: Article

References (29)

1. B.L. McNauhton, J.O. O'Keefe, and C.A. Barnes The stereotrode: a new technique for simultaneous isolation of several single units in the central nervous system from multiple unit records J. Neurosci. Methods 8 1983 391 397
2. M.L. Recce, and J.O. O'Keefe The tetrode: a new technique for multi-unit extracellular recording Soc. Neurosci. Abstr. 23 1989 1546
3. M.A. Wilson, and B.L. McNaughton Dynamics of the hippocampal ensemble code for space Science 261 1993 1055 1058
4. C.M. Gray, P.E. Maldonado, M.A. Wilson, and B.L. McNaughton Tetrodes markedly improve the reliability and yield of multiple single-unit isolation from multiunit recordings in cat striate cortex J. Neurosci. Methods 63 1995 43 54
5. K.D. Wyss, and Handwerker Stap-12: A library system for on-line assimilation and off-line analysis of event/time data Comp. Methods Biomed. 1 1971 209 218
6. R.M. Harper, and D.J. McGinty, A technique for recording single neurons from unrestrained animals, in: M.I. Philllips, C. Thomas (Eds.), Brain unit activity during behavior, Springfield, IL, 1973, pp. 80-104.
7. D. Stagg Computer acquisition of multiunit nerve spike signals Med. Biol. Eng. 11 1973 340 347
8. W. Weimer, D. Kaack, P. Kezdi, and H. Klatt Peak discrimination as a method for quantitative evaluation of neuronal activity by computer Med. Biol. Eng. 13 1975 337 357
9. R.J. Radna, and W.J. Vaughn Computer assisted unit data acquisition/reduction Electro. Clin. Neurophysiol. 44 1978 239 242
10. P.J. Best, An on-line computer technique for display and analysis of single cell activity, in: M.I. Philllips, C. Thomas (Eds.), Brain unit activity during behavior, Springfield, IL, 1973, pp. 67-75.
11. R.J. O'Connell, W.A. Kocsis, and R.L. Schoenfeld Minicomputer identification and time of nerve impulses mixed in a single recording channel Proc. IEEE 61 1973 1615 1621
12. E.L. Schwartz, A. Ramos, and John. E.R. Single cell activity in chronic unit recording: a quantitative study of the unit amplitude spectrum. Brain Res. Bull. 1 1976 57 68
13. B.C. Wheeler, and W.J. Heetderks Separation of cockroach giant action potentials using multiunit analysis techniques Proceedings of the 7th New England Bioengineering Conference 1979 310 313
14. D.J. Mishelevich On-line real-time digital computer separation of extracellular neuroelectric signals IEEE Trans. Biomed. Eng. BME-17 1970 147 150
15. G.L. Gerstein, and W.A. Clark Simultaneous studies of firing patterns in several neurons Science 143 1964 1325 1327
16. B.C. Wheeler, and W.J. Heetderks A comparison of techniques for classification of multiple neural signals IEEE Trans. Biomed. Eng. BME-29 1982 752 759
17. E.M. Schmidt Computer separation of multi-unit neuroelectric data: a review J. Neurosci. Methods 12 1984 95 111
18. M.S. Lewicki A review of methods for spike sorting: the detection and classification of neural action potentials Network: Comput. Neural Syst. 9 1998 R52 R78
19. B.C. Wheeler. Automatic discrimination of single units, in: M.A.L. Nicolelis (Ed.), Methods for neural ensemble recordings, 1999, pp. 61-78.
20. E.M. Glaser, W.B. Marks, On-line separation of interleaved neuronal pulse sequences. Data Acquis. Process. Biol. Med. 5 (1968) 137-156.
21. M. Abeles, and M.H. Goldstein Multispike train analysis Proc. IEEE 65 1977 762 773
22. S.R. Smith, and B.C. Wheeler A real-time processor system for acquisition of multichannel data IEEE Trans. Biomed. Eng. BME-35 1988 875
23. C.M. Stewart, S.D. Newlands, R.R. Riggs, A.A. Perachio. Development of on-line and off-line automated analysis of single unit electrophysiology recordings using LabVIEW Software. Abstr., ARO, Tampa, FL, Feb. 7, 2001a, p. 1027.
24. C.M. Stewart, and A.A. Perachio Faster than Real Time Automated Analysis of Eye Position and Single Unit Electrophysiology Recording using LabView Software 2001 National Student Research Forum Galveston, Texas
25. A.F. Fuchs, and D.A. Robinson A method for measuring horizontal and vertical eye movement chronically in the monkey J. Appl. Physiol. Respir. Environ, Exercise Physiol. 21 1966 1068 1070
26. J.L. McFarland, and A.F. Fuchs Discharge patterns in nucleus prepositus hypoglossi and adjacent medial vestibular nucleus during horizontal eye movement in behaving macaques J. Neurophysiol. 68 1992 319 332
27. M.S. Lewicki Bayesian modeling and classification of neural signals Neural Comput. 6 1994 1005 1030
28. D.J.C. MacKay, R. Takeuchi. Interpolation models with multiple hyperparameters. in: J. Skilling, S. Sibisi (Eds.), Maximum entropy and Bayesian methods, Cambridge, 1995, pp. 249-257.
29. M.C. Quirk, and M.A. Wilson Interaction between spike waveform classification and temporal sequence detection J. Neurosci. Methods 94 1999 41 52