Full-length gag sequences of HIV type 1 subtype C recent seroconverters from Pune, India

AIDS Research and Human Retroviruses

Volumn 20, Issue 10, 2004, Pages 1113-1118

  Kurle, Swarali ^a   Tripathy, Srikanth ^a,b   Jadhav, Sushama ^a   Agnihotri, Kalpana ^a   Paranjape, Ramesh ^a  

^a NATIONAL AIDS RESEARCH INSTITUTE   (India)

^b Maharashtra Industrial Development Corporation India   (India)

Author keywords

[No Author keywords available]

Indexed keywords

GAG PROTEIN; HUMAN IMMUNODEFICIENCY VIRUS VACCINE;

ARTICLE; CLINICAL ARTICLE; DATA BASE; DRUG DESIGN; DRUG SCREENING; FEMALE; GENE CLUSTER; GENE SEQUENCE; GROUP SPECIFIC ANTIGEN GENE; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; INDIA; MALE; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEROCONVERSION; SEROPREVALENCE; VIRUS GENE; VIRUS GENOME;

ADULT; AMINO ACID SEQUENCE; FEMALE; GENE PRODUCTS, GAG; HIV SEROPOSITIVITY; HIV-1; HUMANS; INDIA; MALE; MOLECULAR SEQUENCE DATA; PHYLOGENY; PROTEIN PRECURSORS; SEQUENCE ANALYSIS, DNA;

EID: 6344241307     PISSN: 08892229     EISSN: None     Source Type: Journal    
DOI: 10.1089/aid.2004.20.1113     Document Type: Article

References (16)

1. Esparza J and Bhamarapravati N: Accelerating the development and future availability of HIV-1 vaccines: Why, when, where, and how? Lancet 2000;355(9220):2061-2066.
2. Gadkari DA, Moore D, Sheppard HW, Kulkarni SS, Mehendale SM, and Bollinger RC: Transmission of genetically diverse strains of HIV-1 in Pune, India. Indian J Med Res 1998;107:1-9.
3. Freed EO: HIV-1 replication. Somat Cell Mol Genet 2001; 26(1-6):13-33.
4. Keating SM, Bollinger RC, Quinn TC, Jackson JB, and Carruth LM: Cross-clade T-lymphocyte-mediated immunity to HIV type 1: Implications for vaccine design and immunodetection assays. AIDS Res Hum Retroviruses 2002;18(14):1067-1079.
5. Paranjape RS, Gadkari DA, Lubaki M, Quinn TC, and Bollinger RC: Cross-reactive HIV-1-specific CTL in recent seroconverters from Pune, India. Indian J Med Res 1998;108:35-41.
6. Rowland-Jones SL, Dong T, Fowke KR, Kimani J, Krausa P, Newell H, Blanchard T, Ariyoshi K, Oyugi J, Ngugi E, Bwayo J, MacDonald KS, McMichael AJ, and Plummer FA: Cytotoxic T cell responses to multiple conserved HIV epitopes in HIV-resistant prostitutes in Nairobi. J Clin Invest 1998;102(9):1758-1765.
7. Borrow P, Lewicki H, Wer X, Horwitz MS, Peffer N, Meyers H, Nelson JA, Garrin JE, Hahn BH, Oldstone MB, and Shaw GM: Antiviral pressure exerted by HIV-1-specific cytotoxic T lymphocytes (CTLs) during primary infection demonstrated by rapid selection of CTL escape virus. Nat Med 1997;3:205-211.
8. Rinaldo C, Huang XL, Fan ZF, Ding M, Beltz L, Logar A, Panicali D, Mazzara G, Liebmann J, and Cottrill M: High levels of anti-human immunodeficiency virus type 1 (HIV-1) memory cytotoxic T-lymphocyte activity and low-viral load are associated with lack of disease in HIV-1-infected long-term nonprogressors. J Virol 1995;69:5838-5842.
9. Johnson RP, Trocha A, Yang L, Mazzara GP, Panicali DL, Buchanan TM, and Walker BD: HIV-1 gag-specific cytotoxic T lymphocytes recognize multiple highly conserved epitopes. Fine specificity of the gag-specific response defined by using unstimulated peripheral blood mononuclear cells and cloned effector cells. J Immunol 1991;147(5):1512-1521.
10. + T-cell depletion after simian-human immunodeficiency virus SHIV89.6P mucosal challenge. J Virol 2003;77:11563-11577.
11. +-T-cell epitopes recognized. J Virol 2003;77:11220-11231.
12. Wilson CC, McKinney D, Anders M, MaWhinney S, Forster J, Crimi C, Southwood S, Sette A, Chesnut R, Newman MJ, and Livingston BD: Development of a DNA vaccine designed to induce cytotoxic T-lymphocyte responses to multiple conserved epitopes in HIV-1. J Virol 2003;171:5611-5623.
13. Novitsky V, Smith UR, Gilbert P, McLane MF, Chigwedere P, Williamson C, Ndung'u T, Klein I, Chang SY, Peter T, Thior I, Foley BT, Gaolekwe S, Rybak N, Gaseitsiwe S, Vannberg F, Marlink R, Lee TH, and Essex MV: Human immunodeficiency virus type 1 subtype C molecular phylogeny: Consensus sequence for an AIDS vaccine design? J Virol 2002;76(11):5435-5451.
14. Novitsky VA, Montano MA, McLane MF, Renjifo B, Vannberg F, Foley BT, Ndung'u TP, Rahman M, Makhema MJ, Marlink R, and Essex M: Molecular cloning and phylogenetic analysis of HIV-1 subtype C: A set of 23 full-length clones from Botswana. J Virol 1999;73:4427-4432.
15. Lole KS, Bollinger RC, Paranjape RS, Gadkari D, Kulkarni SS, Novak NG, Ingersoll R, Sheppard HW, and Ray SC: Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of inter-subtype recombination. J Virol 1999;73(1):152-160.
16. Mehra NK, Jaini R, Rajalingam R, Balamurugan A, and Kaur G: Molecular diversity of HLA-A*02 in Asian Indians: Predominance of A*0211. Tissue Antigens 2001;57(6):502-507.