-
1
-
-
0030612833
-
Attenuated T-2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution
-
K. Pervushin, R. Riek, G. Wider, and K. Wüthrich Attenuated T-2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution Proc. Natl Acad. Sci. USA 94 1997 12366 12371
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 12366-12371
-
-
Pervushin, K.1
Riek, R.2
Wider, G.3
Wüthrich, K.4
-
2
-
-
0032012610
-
Direct structure refinement against residual dipolar couplings in the presence of rhombicity of unknown magnitude
-
G.M. Clore, A.M. Gronenborn, and N. Tjandra Direct structure refinement against residual dipolar couplings in the presence of rhombicity of unknown magnitude J. Magn. Reson. 131 1998 159 162
-
(1998)
J. Magn. Reson.
, vol.131
, pp. 159-162
-
-
Clore, G.M.1
Gronenborn, A.M.2
Tjandra, N.3
-
3
-
-
0037442962
-
HADDOCK: A protein-protein docking approach based on biochemical or biophysical information
-
C. Dominguez, R. Boelens, and A.M.J.J. Bonvin HADDOCK: a protein-protein docking approach based on biochemical or biophysical information J. Am. Chem. Soc. 125 2003 1731 1737
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 1731-1737
-
-
Dominguez, C.1
Boelens, R.2
Bonvin, A.M.J.J.3
-
4
-
-
0034685602
-
De novo determination of protein structure by NMR using orientational and long-range order restraints
-
J.C. Hus, D. Marion, and M. Blackledge De novo determination of protein structure by NMR using orientational and long-range order restraints J. Mol. Biol. 298 2000 927 936
-
(2000)
J. Mol. Biol.
, vol.298
, pp. 927-936
-
-
Hus, J.C.1
Marion, D.2
Blackledge, M.3
-
5
-
-
0035965759
-
A dipolar coupling based strategy for simultaneous resonance assignment and structure determination of protein backbones
-
F. Tian, H. Valafar, and J.H. Prestegard A dipolar coupling based strategy for simultaneous resonance assignment and structure determination of protein backbones J. Am. Chem. Soc. 123 2001 11791 11796
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 11791-11796
-
-
Tian, F.1
Valafar, H.2
Prestegard, J.H.3
-
6
-
-
0035955207
-
Single-step determination of protein substructures using dipolar couplings: Aid to structural genomics
-
M. Zweckstetter, and A. Bax Single-step determination of protein substructures using dipolar couplings: aid to structural genomics J. Am. Chem. Soc. 123 2001 9490 9491
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 9490-9491
-
-
Zweckstetter, M.1
Bax, A.2
-
7
-
-
0034725409
-
Determination of the relative orientation of the two halves of the domain-swapped dimer of cyanovirin-N in solution using dipolar couplings and rigid body minimization
-
C.A. Bewley, and G.M. Clore Determination of the relative orientation of the two halves of the domain-swapped dimer of cyanovirin-N in solution using dipolar couplings and rigid body minimization J. Am. Chem. Soc. 122 2000 6009 6016
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 6009-6016
-
-
Bewley, C.A.1
Clore, G.M.2
-
8
-
-
0242331659
-
The energetic cost of domain reorientation in maltose-binding protein as studied by NMR and fluorescence spectroscopy
-
O. Millet, R.P. Hudson, and L.E. Kay The energetic cost of domain reorientation in maltose-binding protein as studied by NMR and fluorescence spectroscopy Proc. Natl Acad. Sci. USA 100 2003 12700 12705
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 12700-12705
-
-
Millet, O.1
Hudson, R.P.2
Kay, L.E.3
-
9
-
-
0035875870
-
Ligand-induced structural changes to maltodextrin-binding protein as studied by solution NMR spectroscopy
-
J. Evenas, V. Tugarinov, N.R. Skrynnikov, N.K. Goto, R. Muhandiram, and L.E. Kay Ligand-induced structural changes to maltodextrin-binding protein as studied by solution NMR spectroscopy J. Mol. Biol. 309 2001 961 974
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 961-974
-
-
Evenas, J.1
Tugarinov, V.2
Skrynnikov, N.R.3
Goto, N.K.4
Muhandiram, R.5
Kay, L.E.6
-
10
-
-
0034972906
-
What is the average conformation of bacteriophage T4 lysozyme in solution? a domain orientation study using dipolar couplings measured by solution NMR
-
N.K. Goto, N.R. Skrynnikov, F.W. Dahlquist, and L.E. Kay What is the average conformation of bacteriophage T4 lysozyme in solution? A domain orientation study using dipolar couplings measured by solution NMR J. Mol. Biol. 308 2001 745 764
-
(2001)
J. Mol. Biol.
, vol.308
, pp. 745-764
-
-
Goto, N.K.1
Skrynnikov, N.R.2
Dahlquist, F.W.3
Kay, L.E.4
-
11
-
-
0034254909
-
Accurate and rapid docking of protein-protein complexes on the basis of intermolecular nuclear Overhauser enhancement data and dipolar couplings by rigid body minimization
-
G.M. Clore Accurate and rapid docking of protein-protein complexes on the basis of intermolecular nuclear Overhauser enhancement data and dipolar couplings by rigid body minimization Proc. Natl Acad. Sci. USA 97 2000 9021 9025
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 9021-9025
-
-
Clore, G.M.1
-
12
-
-
0037433504
-
Docking of protein-protein complexes on the basis of highly ambiguous intermolecular distance restraints derived from H-1(N)/N-15 chemical shift mapping and backbone N-15-H-1 residual dipolar couplings using conjoined rigid body/torsion angle dynamics
-
G.M. Clore, and C.D. Schwieters Docking of protein-protein complexes on the basis of highly ambiguous intermolecular distance restraints derived from H-1(N)/N-15 chemical shift mapping and backbone N-15-H-1 residual dipolar couplings using conjoined rigid body/torsion angle dynamics J. Am. Chem. Soc. 125 2003 2902 2912
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 2902-2912
-
-
Clore, G.M.1
Schwieters, C.D.2
-
13
-
-
0035997077
-
Quaternary structure built from subunits combining NMR and small-angle X-ray scattering data
-
M.L. Mattinen, K. Paakkonen, T. Ikonen, J. Craven, T. Drakenberg, and R. Serimaa Quaternary structure built from subunits combining NMR and small-angle X-ray scattering data Biophys. J. 83 2002 1177 1183
-
(2002)
Biophys. J.
, vol.83
, pp. 1177-1183
-
-
Mattinen, M.L.1
Paakkonen, K.2
Ikonen, T.3
Craven, J.4
Drakenberg, T.5
Serimaa, R.6
-
14
-
-
0033631450
-
Molecular symmetry as an aid to geometry determination in ligand protein complexes
-
H.M. Al-Hashimi, P.J. Bolon, and J.H. Prestegard Molecular symmetry as an aid to geometry determination in ligand protein complexes J. Magn. Reson. 142 2000 153 158
-
(2000)
J. Magn. Reson.
, vol.142
, pp. 153-158
-
-
Al-Hashimi, H.M.1
Bolon, P.J.2
Prestegard, J.H.3
-
15
-
-
0033569503
-
Residual dipolar coupling derived orientational constraints on ligand geometry in a 53 kDa protein-ligand complex
-
P.J. Bolon, H.M. Al-Hashimi, and J.H. Prestegard Residual dipolar coupling derived orientational constraints on ligand geometry in a 53 kDa protein-ligand complex J. Mol. Biol. 293 1999 107 115
-
(1999)
J. Mol. Biol.
, vol.293
, pp. 107-115
-
-
Bolon, P.J.1
Al-Hashimi, H.M.2
Prestegard, J.H.3
-
16
-
-
0037466291
-
Structural characterization of a mannose-binding protein-trimannoside complex using residual dipolar couplings
-
N.U. Jain, S. Noble, and J.H. Prestegard Structural characterization of a mannose-binding protein-trimannoside complex using residual dipolar couplings J. Mol. Biol. 328 2003 451 462
-
(2003)
J. Mol. Biol.
, vol.328
, pp. 451-462
-
-
Jain, N.U.1
Noble, S.2
Prestegard, J.H.3
-
17
-
-
0023654454
-
Biosynthesis of lipid-a precursors in Escherichia coli - A cytoplasmic acyltransferase that converts Udp-N-acetylglucosamine to Udp-3-0-(R-3- hydroxymyristoyl)-N-acetylglucosamine
-
M.S. Anderson, and C.R.H. Raetz Biosynthesis of lipid-a precursors in Escherichia coli - a cytoplasmic acyltransferase that converts Udp-N-acetylglucosamine to Udp-3-0-(R-3-hydroxymyristoyl)-N-acetylglucosamine J. Biol. Chem. 262 1987 5159 5169
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 5159-5169
-
-
Anderson, M.S.1
Raetz, C.R.H.2
-
18
-
-
0027304442
-
Udp-N-acetylglucosamine acyltransferase of Escherichia coli-the 1st step of endotoxin biosynthesis is thermodynamically unfavorable
-
M.S. Anderson, H.G. Bull, S.M. Galloway, T.M. Kelly, S. Mohan, K. Radika, and C.R.H. Raetz Udp-N-acetylglucosamine acyltransferase of Escherichia coli-the 1st step of endotoxin biosynthesis is thermodynamically unfavorable J. Biol. Chem. 268 1993 19858 19865
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 19858-19865
-
-
Anderson, M.S.1
Bull, H.G.2
Galloway, S.M.3
Kelly, T.M.4
Mohan, S.5
Radika, K.6
Raetz, C.R.H.7
-
19
-
-
0028965644
-
Receptor-dependent mechanisms of cell stimulation by bacterial-endotoxin
-
R.J. Ulevitch, and P.S. Tobias Receptor-dependent mechanisms of cell stimulation by bacterial-endotoxin Annu. Rev. Immunol. 13 1995 437 457
-
(1995)
Annu. Rev. Immunol.
, vol.13
, pp. 437-457
-
-
Ulevitch, R.J.1
Tobias, P.S.2
-
20
-
-
0025613125
-
Refinement of the nmr structures for acyl carrier protein with scalar coupling data
-
Y.M. Kim, and J.H. Prestegard Refinement of the nmr structures for acyl carrier protein with scalar coupling data Proteins: Struct. Funct. Genet. 8 1990 377 385
-
(1990)
Proteins: Struct. Funct. Genet.
, vol.8
, pp. 377-385
-
-
Kim, Y.M.1
Prestegard, J.H.2
-
21
-
-
0023677654
-
3-Dimensional structure of acyl carrier protein in solution determined by nuclear magnetic-resonance and the combined use of dynamical simulated annealing and distance geometry
-
T.A. Holak, M. Nilges, J.H. Prestegard, A.M. Gronenborn, and G.M. Clore 3-Dimensional structure of acyl carrier protein in solution determined by nuclear magnetic-resonance and the combined use of dynamical simulated annealing and distance geometry Eur. J. Biochem. 175 1988 9 15
-
(1988)
Eur. J. Biochem.
, vol.175
, pp. 9-15
-
-
Holak, T.A.1
Nilges, M.2
Prestegard, J.H.3
Gronenborn, A.M.4
Clore, G.M.5
-
22
-
-
0036277954
-
X-ray crystallographic studies on butyryl-ACP reveal flexibility of the structure around a putative acyl chain binding site
-
A. Roujeinikova, C. Baldock, W.J. Simon, J. Gilroy, P.J. Baker, and A.R. Stuitje X-ray crystallographic studies on butyryl-ACP reveal flexibility of the structure around a putative acyl chain binding site Structure 10 2002 825 835
-
(2002)
Structure
, vol.10
, pp. 825-835
-
-
Roujeinikova, A.1
Baldock, C.2
Simon, W.J.3
Gilroy, J.4
Baker, P.J.5
Stuitje, A.R.6
-
23
-
-
0242488921
-
NMR solution structure determination of membrane proteins reconstituted in detergent micelles
-
C. Fernandez, and K. Wüthrich NMR solution structure determination of membrane proteins reconstituted in detergent micelles FEBS Letters 555 2003 144 150
-
(2003)
FEBS Letters
, vol.555
, pp. 144-150
-
-
Fernandez, C.1
Wüthrich, K.2
-
24
-
-
0033578887
-
The active site of Escherichia coli UDP-N-acetylglucosamine acyltransferase-chemical modification and site-directed mutagenesis
-
T.J.O. Wyckoff, and C.R.H. Raetz The active site of Escherichia coli UDP-N-acetylglucosamine acyltransferase-chemical modification and site-directed mutagenesis J. Biol. Chem. 274 1999 27047 27055
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 27047-27055
-
-
Wyckoff, T.J.O.1
Raetz, C.R.H.2
-
25
-
-
0033551495
-
Domain orientation and dynamics in multidomain proteins from residual dipolar couplings
-
M.W.F. Fischer, J.A. Losonczi, J.L. Weaver, and J.H. Prestegard Domain orientation and dynamics in multidomain proteins from residual dipolar couplings Biochemistry 38 1999 9013 9022
-
(1999)
Biochemistry
, vol.38
, pp. 9013-9022
-
-
Fischer, M.W.F.1
Losonczi, J.A.2
Weaver, J.L.3
Prestegard, J.H.4
-
26
-
-
0036000578
-
Refinement of the solution structure of the heparin-binding domain of vascular endothelial growth factor using residual dipolar couplings
-
M.E. Stauffer, N.J. Skelton, and W.J. Fairbrother Refinement of the solution structure of the heparin-binding domain of vascular endothelial growth factor using residual dipolar couplings J. Biomol. NMR 23 2002 57 61
-
(2002)
J. Biomol. NMR
, vol.23
, pp. 57-61
-
-
Stauffer, M.E.1
Skelton, N.J.2
Fairbrother, W.J.3
-
27
-
-
0033145058
-
Order matrix analysis of residual dipolar couplings using singular value decomposition
-
J.A. Losonczi, M. Andrec, M.W.F. Fischer, and J.H. Prestegard Order matrix analysis of residual dipolar couplings using singular value decomposition J. Magn. Reson. 138 1999 334 342
-
(1999)
J. Magn. Reson.
, vol.138
, pp. 334-342
-
-
Losonczi, J.A.1
Andrec, M.2
Fischer, M.W.F.3
Prestegard, J.H.4
-
28
-
-
0028844306
-
A left-handed parallel beta-helix in the structure of Udp-N-acetylglucosamine acyltransferase
-
C.R.H. Raetz, and S.L. Roderick A left-handed parallel beta-helix in the structure of Udp-N-acetylglucosamine acyltransferase Science 270 1995 997 1000
-
(1995)
Science
, vol.270
, pp. 997-1000
-
-
Raetz, C.R.H.1
Roderick, S.L.2
-
29
-
-
0032483819
-
Hydrocarbon rulers in UDP-N-acetylglucosamine acyltransferases
-
T.J.O. Wyckoff, S.H. Lin, R.J. Cotter, G.D. Dotson, and C.R.H. Raetz Hydrocarbon rulers in UDP-N-acetylglucosamine acyltransferases J. Biol. Chem. 273 1998 32369 32372
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 32369-32372
-
-
Wyckoff, T.J.O.1
Lin, S.H.2
Cotter, R.J.3
Dotson, G.D.4
Raetz, C.R.H.5
-
30
-
-
0035896547
-
Identification and analysis of the acyl carrier protein (ACP) docking site on beta-ketoacyl-ACP synthase III
-
Y.M. Zhang, M.S. Rao, R.J. Heath, A.C. Price, A.J. Olson, C.O. Rock, and S.W. White Identification and analysis of the acyl carrier protein (ACP) docking site on beta-ketoacyl-ACP synthase III J. Biol. Chem. 276 2001 8231 8238
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 8231-8238
-
-
Zhang, Y.M.1
Rao, M.S.2
Heath, R.J.3
Price, A.C.4
Olson, A.J.5
Rock, C.O.6
White, S.W.7
-
31
-
-
0028943591
-
Amide exchange-rates in Escherichia coli acyl carrier protein-correlation with protein-structure and dynamics
-
M. Andrec, R.B. Hill, and J.H. Prestegard Amide exchange-rates in Escherichia coli acyl carrier protein-correlation with protein-structure and dynamics Protein Sci. 4 1995 983 993
-
(1995)
Protein Sci.
, vol.4
, pp. 983-993
-
-
Andrec, M.1
Hill, R.B.2
Prestegard, J.H.3
-
32
-
-
0242362183
-
Crystal structure of UDP-N-acetylglucosamine acyltransferase from Helicobacter pylori
-
B.I. Lee, and S.W. Suh Crystal structure of UDP-N-acetylglucosamine acyltransferase from Helicobacter pylori Proteins: Struct. Funct. Genet. 53 2003 772 774
-
(2003)
Proteins: Struct. Funct. Genet.
, vol.53
, pp. 772-774
-
-
Lee, B.I.1
Suh, S.W.2
-
33
-
-
0346101746
-
Key residues responsible for acyl carrier protein and beta-ketoacyl-acyl carrier protein reductase (FabG) interaction
-
Y.M. Zhang, B.N. Wu, J. Zheng, and C.O. Rock Key residues responsible for acyl carrier protein and beta-ketoacyl-acyl carrier protein reductase (FabG) interaction J. Biol. Chem. 278 2003 52935 52943
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 52935-52943
-
-
Zhang, Y.M.1
Wu, B.N.2
Zheng, J.3
Rock, C.O.4
-
34
-
-
0037238269
-
The application of computational methods to explore the diversity and structure of bacterial fatty acid synthase
-
Y.M. Zhang, H. Marrakchi, S.W. White, and C.O. Rock The application of computational methods to explore the diversity and structure of bacterial fatty acid synthase J. Lipid Res. 44 2003 1 10
-
(2003)
J. Lipid Res.
, vol.44
, pp. 1-10
-
-
Zhang, Y.M.1
Marrakchi, H.2
White, S.W.3
Rock, C.O.4
-
35
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structures
-
R. Koradi, M. Billeter, and K. Wüthrich MOLMOL: a program for display and analysis of macromolecular structures J. Mol. Graph. 14 1996 51 55
-
(1996)
J. Mol. Graph.
, vol.14
, pp. 51-55
-
-
Koradi, R.1
Billeter, M.2
Wüthrich, K.3
-
36
-
-
0034884233
-
A novel interactive tool for rigid-body modeling of multi-domain macromolecules using residual dipolar couplings
-
P. Dosset, J.C. Hus, D. Marion, and M. Blackledge A novel interactive tool for rigid-body modeling of multi-domain macromolecules using residual dipolar couplings J. Biomol. NMR 20 2001 223 231
-
(2001)
J. Biomol. NMR
, vol.20
, pp. 223-231
-
-
Dosset, P.1
Hus, J.C.2
Marion, D.3
Blackledge, M.4
-
37
-
-
0029795040
-
The CD4 determinant for downregulation by HIV-1 Nef directly binds to Nef. Mapping of the Nef binding surface by NMR
-
S. Grzesiek, S.J. Stahl, P.T. Wingfield, and A. Bax The CD4 determinant for downregulation by HIV-1 Nef directly binds to Nef. Mapping of the Nef binding surface by NMR Biochemistry 35 1996 10256 10261
-
(1996)
Biochemistry
, vol.35
, pp. 10256-10261
-
-
Grzesiek, S.1
Stahl, S.J.2
Wingfield, P.T.3
Bax, A.4
|