-
1
-
-
4344692339
-
Mouse-centric comparative transcriptomics of protein coding and non-coding RNAs
-
Suzuki,M. and Hayashizaki,Y. (2004) Mouse-centric comparative transcriptomics of protein coding and non-coding RNAs. BioEssays, 26, 833-843.
-
(2004)
BioEssays
, vol.26
, pp. 833-843
-
-
Suzuki, M.1
Hayashizaki, Y.2
-
2
-
-
0037819447
-
Transcription regulation and animal diversity
-
Levine,M. and Tjian,R. (2003) Transcription regulation and animal diversity. Nature, 424, 147-151.
-
(2003)
Nature
, vol.424
, pp. 147-151
-
-
Levine, M.1
Tjian, R.2
-
3
-
-
0028903049
-
Combinatorial regulation of transcription. I: General aspects of transcriptional control
-
Ernst,P. and Smale,S.T. (1995) Combinatorial regulation of transcription. I: General aspects of transcriptional control. Immunity, 2, 311-319.
-
(1995)
Immunity
, vol.2
, pp. 311-319
-
-
Ernst, P.1
Smale, S.T.2
-
4
-
-
0033954325
-
COMPEL: A database on composite regulatory elements providing combinatorial transcriptional regulation
-
Kel-Margoulis,O.V., Romashchenko,A.G., Kolchanov,N.A., Wingender,E. and Kel,A.E. (2000) COMPEL: A database on composite regulatory elements providing combinatorial transcriptional regulation. Nucleic Acids Res., 28, 311-315.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 311-315
-
-
Kel-Margoulis, O.V.1
Romashchenko, A.G.2
Kolchanov, N.A.3
Wingender, E.4
Kel, A.E.5
-
5
-
-
32444446240
-
Gene regulatory networks and the evolution of animal body plans
-
Davidson,E.H. and Erwin,D.H. (2006) Gene regulatory networks and the evolution of animal body plans. Science, 311, 796-800.
-
(2006)
Science
, vol.311
, pp. 796-800
-
-
Davidson, E.H.1
Erwin, D.H.2
-
6
-
-
0142084743
-
Scanning human gene deserts for long-range enhancers
-
Nobrega,M.A., Ovcharenko,I., Afzal,V. and Rubin,E.M. (2003) Scanning human gene deserts for long-range enhancers. Science, 302, 413.
-
(2003)
Science
, vol.302
, pp. 413
-
-
Nobrega, M.A.1
Ovcharenko, I.2
Afzal, V.3
Rubin, E.M.4
-
7
-
-
0042810698
-
A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly
-
Lettice,L.A., Heaney,S.J., Purdie,L.A., Li,L., de Beer,P., Oostra,B.A., Goode,D., Elgar,G., Hill,R.E. and de Graaff,E. (2003) A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly. Hum. Mol. Genet., 12, 1725-1735.
-
(2003)
Hum. Mol. Genet
, vol.12
, pp. 1725-1735
-
-
Lettice, L.A.1
Heaney, S.J.2
Purdie, L.A.3
Li, L.4
de Beer, P.5
Oostra, B.A.6
Goode, D.7
Elgar, G.8
Hill, R.E.9
de Graaff, E.10
-
8
-
-
10344251533
-
Highly conserved upstream sequences for transcription factor genes and implications for the regulatory network
-
Iwama,H. and Gojobori,T. (2004) Highly conserved upstream sequences for transcription factor genes and implications for the regulatory network. Proc. Natl Acad. Sci. USA, 101, 17156-17161.
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 17156-17161
-
-
Iwama, H.1
Gojobori, T.2
-
9
-
-
22144459722
-
Prediction of cis-regulatory elements using binding site matrices-the successes, the failures and the reasons for both
-
Vavouri,T. and Elgar,G. (2005) Prediction of cis-regulatory elements using binding site matrices-the successes, the failures and the reasons for both. Curr.t Opin. Genet. Dev., 15, 395-402.
-
(2005)
Curr.t Opin. Genet. Dev
, vol.15
, pp. 395-402
-
-
Vavouri, T.1
Elgar, G.2
-
10
-
-
33846876333
-
Predicting tissue-specific enhancers in the human genome
-
Pennacchio,L.A., Loots,G.G., Nobrega,M.A. and Ovcharenko,I. (2007) Predicting tissue-specific enhancers in the human genome. Genome Res. 17, 201-211.
-
(2007)
Genome Res
, vol.17
, pp. 201-211
-
-
Pennacchio, L.A.1
Loots, G.G.2
Nobrega, M.A.3
Ovcharenko, I.4
-
11
-
-
2542557397
-
Comprehensive search for HNF-1beta-regulated genes in mouse hepatoma cells perturbed by transcription regulatory factor-targeted RNAi
-
Tanaka,T., Tomaru,Y., Nomura,Y., Miura,H., Suzuki,M. and Hayashizaki,Y. (2004) Comprehensive search for HNF-1beta-regulated genes in mouse hepatoma cells perturbed by transcription regulatory factor-targeted RNAi. Nucleic Acids Res., 32, 2740-2750.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 2740-2750
-
-
Tanaka, T.1
Tomaru, Y.2
Nomura, Y.3
Miura, H.4
Suzuki, M.5
Hayashizaki, Y.6
-
12
-
-
33645381936
-
The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells
-
Loh,Y.H., Wu,Q., Chew,J.L., Vega,V.B., Zhang,W., Chen,X., Bourque,G., George,J., Leong,B., Liu,J. et al. (2006) The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells. Nat. Genet., 38, 431-440.
-
(2006)
Nat. Genet
, vol.38
, pp. 431-440
-
-
Loh, Y.H.1
Wu, Q.2
Chew, J.L.3
Vega, V.B.4
Zhang, W.5
Chen, X.6
Bourque, G.7
George, J.8
Leong, B.9
Liu, J.10
-
13
-
-
45549096649
-
Identification of transcriptional regulatory cascades in retinoic acid-induced growth arrest of HepG2 cells
-
Nakanishi,M., Tomaru,Y., Miura,H., Hayashizaki,Y. and Suzuki,M. (2008) Identification of transcriptional regulatory cascades in retinoic acid-induced growth arrest of HepG2 cells. Nucleic Acids Res., 36, 3443-3454.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 3443-3454
-
-
Nakanishi, M.1
Tomaru, Y.2
Miura, H.3
Hayashizaki, Y.4
Suzuki, M.5
-
14
-
-
33745152719
-
Genome-wide computational prediction of transcriptional regulatory modules reveals new insights into human gene expression
-
Blanchette,M., Bataille,A.R., Chen,X., Poitras,C., Laganiere,J., Lefebvre,C., Deblois,G., Giguere,V., Ferretti,V., Bergeron,D. et al. (2006) Genome-wide computational prediction of transcriptional regulatory modules reveals new insights into human gene expression. Genome Res., 16, 656-668.
-
(2006)
Genome Res
, vol.16
, pp. 656-668
-
-
Blanchette, M.1
Bataille, A.R.2
Chen, X.3
Poitras, C.4
Laganiere, J.5
Lefebvre, C.6
Deblois, G.7
Giguere, V.8
Ferretti, V.9
Bergeron, D.10
-
15
-
-
33846067075
-
PReMod: A database of genome-wide mammalian cis-regulatory module predictions
-
Ferretti,V., Poitras,C., Bergeron,D., Coulombe,B., Robert,F. and Blanchette,M. (2007) PReMod: A database of genome-wide mammalian cis-regulatory module predictions. Nucleic Acids Res., 35, D122-D126.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Ferretti, V.1
Poitras, C.2
Bergeron, D.3
Coulombe, B.4
Robert, F.5
Blanchette, M.6
-
16
-
-
3242888285
-
rVISTA 2.0: Evolutionary analysis of transcription factor binding sites
-
Loots,G.G. and Ovcharenko,I. (2004) rVISTA 2.0: Evolutionary analysis of transcription factor binding sites. Nucleic Acids Res., 32, W217-W221.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Loots, G.G.1
Ovcharenko, I.2
-
17
-
-
0036105591
-
rVista for comparative sequence-based discovery of functional transcription factor binding sites
-
Loots,G.G., Ovcharenko,I., Pachter,L., Dubchak,I. and Rubin,E.M. (2002) rVista for comparative sequence-based discovery of functional transcription factor binding sites. Genome Res., 12, 832-839.
-
(2002)
Genome Res
, vol.12
, pp. 832-839
-
-
Loots, G.G.1
Ovcharenko, I.2
Pachter, L.3
Dubchak, I.4
Rubin, E.M.5
-
18
-
-
1542748076
-
-
Aligning multiple genomic sequences with the threaded blockset aligner
-
Blanchette,M., Kent,W.J., Riemer,C., Elnitski,L., Smit,A.F., Roskin,K.M., Baertsch,R., Rosenbloom,K., Clawson,H., Green,E.D. et al. (2004) Aligning multiple genomic sequences with the threaded blockset aligner. Genome Res., 14, 708-715.
-
(2004)
Genome Res
, vol.14
, pp. 708-715
-
-
Blanchette, M.1
Kent, W.J.2
Riemer, C.3
Elnitski, L.4
Smit, A.F.5
Roskin, K.M.6
Baertsch, R.7
Rosenbloom, K.8
Clawson, H.9
Green, E.D.10
-
19
-
-
3242878193
-
ECR Browser: A tool for visualizing and accessing data from comparisons of multiple vertebrate genomes
-
Ovcharenko,I., Nobrega,M.A., Loots,G.G. and Stubbs,L. (2004) ECR Browser: A tool for visualizing and accessing data from comparisons of multiple vertebrate genomes. Nucleic Acids Res., 32, W280-W286.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Ovcharenko, I.1
Nobrega, M.A.2
Loots, G.G.3
Stubbs, L.4
-
20
-
-
33845898164
-
ECRbase: Database of evolutionary conserved regions, promoters, and transcription factor binding sites in vertebrate genomes
-
Loots,G. and Ovcharenko,I. (2007) ECRbase: Database of evolutionary conserved regions, promoters, and transcription factor binding sites in vertebrate genomes. Bioinformatics, 23, 122-124.
-
(2007)
Bioinformatics
, vol.23
, pp. 122-124
-
-
Loots, G.1
Ovcharenko, I.2
-
21
-
-
0037397918
-
GALA, a database for genomic sequence alignments and annotations
-
Giardine,B., Elnitski,L., Riemer,C., Makalowska,I., Schwartz,S., Miller,W. and Hardison,R.C. (2003) GALA, a database for genomic sequence alignments and annotations. Genome Res., 13, 732-741.
-
(2003)
Genome Res
, vol.13
, pp. 732-741
-
-
Giardine, B.1
Elnitski, L.2
Riemer, C.3
Makalowska, I.4
Schwartz, S.5
Miller, W.6
Hardison, R.C.7
-
22
-
-
0041853625
-
MATCH: A tool for searching transcription factor binding sites in DNA sequences
-
Kel,A.E., Gossling,E., Reuter,I., Cheremushkin,E., Kel-Margoulis,O.V. and Wingender,E. (2003) MATCH: A tool for searching transcription factor binding sites in DNA sequences. Nucleic Acids Res., 31, 3576-3579.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3576-3579
-
-
Kel, A.E.1
Gossling, E.2
Reuter, I.3
Cheremushkin, E.4
Kel-Margoulis, O.V.5
Wingender, E.6
-
23
-
-
33644876958
-
TRANSFAC and its module TRANSCompel: Transcriptional gene regulation in eukaryotes
-
Matys,V., Kel-Margoulis,O.V., Fricke,E., Liebich,I., Land,S., Barre-Dirrie,A., Reuter,I., Chekmenev,D., Krull,M., Hornischer,K. et al. (2006) TRANSFAC and its module TRANSCompel: Transcriptional gene regulation in eukaryotes. Nucleic Acids Res., 34, D108-D110.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Matys, V.1
Kel-Margoulis, O.V.2
Fricke, E.3
Liebich, I.4
Land, S.5
Barre-Dirrie, A.6
Reuter, I.7
Chekmenev, D.8
Krull, M.9
Hornischer, K.10
-
24
-
-
10744227070
-
Control of pancreas and liver gene expression by HNF transcription factors
-
Odom,D.T., Zizlsperger,N., Gordon,D.B., Bell,G.W., Rinaldi,N.J., Murray,H.L., Volkert,T.L., Schreiber,J., Rolfe,P.A., Gifford,D.K. et al. (2004) Control of pancreas and liver gene expression by HNF transcription factors. Science, 303, 1378-1381.
-
(2004)
Science
, vol.303
, pp. 1378-1381
-
-
Odom, D.T.1
Zizlsperger, N.2
Gordon, D.B.3
Bell, G.W.4
Rinaldi, N.J.5
Murray, H.L.6
Volkert, T.L.7
Schreiber, J.8
Rolfe, P.A.9
Gifford, D.K.10
-
25
-
-
33745456986
-
-
Odom,D.T., Dowell,R.D., Jacobsen,E.S., Nekludova,L., Rolfe,P.A., Danford,T.W., Gifford,D.K., Fraenkel,E., Bell,G.I. and Young,R.A. (2006) Core transcriptional regulatory circuitry in human hepatocytes. Mol. Syst. Biol., 2, 2006.0017.
-
Odom,D.T., Dowell,R.D., Jacobsen,E.S., Nekludova,L., Rolfe,P.A., Danford,T.W., Gifford,D.K., Fraenkel,E., Bell,G.I. and Young,R.A. (2006) Core transcriptional regulatory circuitry in human hepatocytes. Mol. Syst. Biol., 2, 2006.0017.
-
-
-
-
26
-
-
9644272451
-
Orphan nuclear receptor small heterodimer partner represses hepatocyte nuclear factor 3/ Foxa transactivation via inhibition of its DNA binding
-
Kim,J.Y., Kim,H.J., Kim,K.T., Park,Y.Y., Seong,H.A., Park,K.C., Lee,I.K., Ha,H., Shong,M., Park,S.C. et al. (2004) Orphan nuclear receptor small heterodimer partner represses hepatocyte nuclear factor 3/ Foxa transactivation via inhibition of its DNA binding. Mol. Endocrinol., 18, 2880-2894.
-
(2004)
Mol. Endocrinol
, vol.18
, pp. 2880-2894
-
-
Kim, J.Y.1
Kim, H.J.2
Kim, K.T.3
Park, Y.Y.4
Seong, H.A.5
Park, K.C.6
Lee, I.K.7
Ha, H.8
Shong, M.9
Park, S.C.10
-
27
-
-
33750442923
-
Genome-wide analysis of estrogen receptor binding sites
-
Carroll,J.S., Meyer,C.A., Song,J., Li,W., Geistlinger,T.R., Eeckhoute,J., Brodsky,A.S., Keeton,E.K., Fertuck,K.C., Hall,G.F. et al. (2006) Genome-wide analysis of estrogen receptor binding sites. Nat. Genet., 38, 1289-1297.
-
(2006)
Nat. Genet
, vol.38
, pp. 1289-1297
-
-
Carroll, J.S.1
Meyer, C.A.2
Song, J.3
Li, W.4
Geistlinger, T.R.5
Eeckhoute, J.6
Brodsky, A.S.7
Keeton, E.K.8
Fertuck, K.C.9
Hall, G.F.10
-
28
-
-
32244431931
-
Foxa1 and Foxa2 interact with the androgen receptor to regulate prostate and epididymal genes differentially
-
Yu,X., Gupta,A., Wang,Y., Suzuki,K., Mirosevich,J., Orgebin-Crist,M.C. and Matusik,R.J. (2005) Foxa1 and Foxa2 interact with the androgen receptor to regulate prostate and epididymal genes differentially. Ann. NY Acad. Sci., 1061, 77-93.
-
(2005)
Ann. NY Acad. Sci
, vol.1061
, pp. 77-93
-
-
Yu, X.1
Gupta, A.2
Wang, Y.3
Suzuki, K.4
Mirosevich, J.5
Orgebin-Crist, M.C.6
Matusik, R.J.7
-
29
-
-
0036558105
-
Control of IL-2Ralpha gene expression: Structural changes within the proximal enhancer/core promoter during T-cell development
-
Yeh,J.H., Spicuglia,S., Kumar,S., Sanchez-Sevilla,A., Ferrier,P. and Imbert,J. (2002) Control of IL-2Ralpha gene expression: Structural changes within the proximal enhancer/core promoter during T-cell development. Nucleic Acids Res., 30, 1944-1951.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 1944-1951
-
-
Yeh, J.H.1
Spicuglia, S.2
Kumar, S.3
Sanchez-Sevilla, A.4
Ferrier, P.5
Imbert, J.6
-
30
-
-
0141681892
-
A comprehensive search for HNF-3alpha-regulated genes in mouse hepatoma cells by 60K cDNA microarray and chromatin immunoprecipitation/PCR analysis
-
Tomaru,Y., Kondo,S., Suzuki,M. and Hayashizaki,Y. (2003) A comprehensive search for HNF-3alpha-regulated genes in mouse hepatoma cells by 60K cDNA microarray and chromatin immunoprecipitation/PCR analysis. Biochem. Biophys. Res. Commun., 310, 667-674.
-
(2003)
Biochem. Biophys. Res. Commun
, vol.310
, pp. 667-674
-
-
Tomaru, Y.1
Kondo, S.2
Suzuki, M.3
Hayashizaki, Y.4
-
31
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Rozen,S. and Skaletsky,H. (2000) Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol., 132, 365-386.
-
(2000)
Methods Mol. Biol
, vol.132
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.2
-
32
-
-
33644943043
-
Histone H3 acetylated at lysine 9 in promoter is associated with low nucleosome density in the vicinity of transcription start site in human cell
-
Nishida,H., Suzuki,T., Kondo,S., Miura,H., Fujimura,Y. and Hayashizaki,Y. (2006) Histone H3 acetylated at lysine 9 in promoter is associated with low nucleosome density in the vicinity of transcription start site in human cell. Chromosome Res., 14, 203-211.
-
(2006)
Chromosome Res
, vol.14
, pp. 203-211
-
-
Nishida, H.1
Suzuki, T.2
Kondo, S.3
Miura, H.4
Fujimura, Y.5
Hayashizaki, Y.6
-
33
-
-
0346844036
-
Functional characterization of transcription factor binding sites for HNF1-alpha, HNF3-beta (FOXA2), HNF4-alpha, Sp1 and Sp3 in the human prothrombin gene enhancer
-
Ceelie,H., Spaargaren-Van Riel,C.C., De Jong,M., Bertina,R.M. and Vos,H.L. (2003) Functional characterization of transcription factor binding sites for HNF1-alpha, HNF3-beta (FOXA2), HNF4-alpha, Sp1 and Sp3 in the human prothrombin gene enhancer. J. Thromb. Haemost., 1 1688-1698.
-
(2003)
J. Thromb. Haemost
, vol.1
, pp. 1688-1698
-
-
Ceelie, H.1
Spaargaren-Van Riel, C.C.2
De Jong, M.3
Bertina, R.M.4
Vos, H.L.5
-
34
-
-
0343051878
-
Transcriptional regulation in endoderm development: Characterization of an enhancer controlling Hnf3g expression by transgenesis and targeted mutagenesis
-
Hiemisch,H., Schutz,G. and Kaestner,K.H. (1997) Transcriptional regulation in endoderm development: Characterization of an enhancer controlling Hnf3g expression by transgenesis and targeted mutagenesis. EMBO J., 16, 3995-4006.
-
(1997)
EMBO J
, vol.16
, pp. 3995-4006
-
-
Hiemisch, H.1
Schutz, G.2
Kaestner, K.H.3
-
35
-
-
0038813706
-
Up-regulation of p300 binding and p50 acetylation in tumor necrosis factor-alpha-induced cyclooxygenase-2 promoter activation
-
Deng,W.G., Zhu,Y. and Wu,K.K. (2003) Up-regulation of p300 binding and p50 acetylation in tumor necrosis factor-alpha-induced cyclooxygenase-2 promoter activation. J. Biol. Chem., 278, 4770-4777.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 4770-4777
-
-
Deng, W.G.1
Zhu, Y.2
Wu, K.K.3
-
36
-
-
0034724671
-
Transcriptional activation by hepatocyte nuclear factor-1 requires synergism between multiple coactivator proteins
-
Soutoglou,E., Papafotiou,G., Katrakili,N. and Talianidis,I. (2000) Transcriptional activation by hepatocyte nuclear factor-1 requires synergism between multiple coactivator proteins. J. Biol. Chem., 275, 12515-12520.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 12515-12520
-
-
Soutoglou, E.1
Papafotiou, G.2
Katrakili, N.3
Talianidis, I.4
-
37
-
-
3042676514
-
Hepatocyte nuclear factor 4alpha enhances the hepatocyte nuclear factor 1alpha-mediated activation of transcription
-
Eeckhoute,J., Formstecher,P. and Laine,B. (2004) Hepatocyte nuclear factor 4alpha enhances the hepatocyte nuclear factor 1alpha-mediated activation of transcription. Nucleic Acids Res., 32, 2586-2593.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 2586-2593
-
-
Eeckhoute, J.1
Formstecher, P.2
Laine, B.3
-
38
-
-
0037123437
-
Foxa2 (HNF3beta) controls multiple genes implicated in metabolism-secretion coupling of glucose-induced insulin release
-
Wang,H., Gauthier,B.R., Hagenfeldt-Johansson,K.A., Iezzi,M. and Wollheim,C.B. (2002) Foxa2 (HNF3beta) controls multiple genes implicated in metabolism-secretion coupling of glucose-induced insulin release. J. Biol. Chem., 277, 17564-17570.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 17564-17570
-
-
Wang, H.1
Gauthier, B.R.2
Hagenfeldt-Johansson, K.A.3
Iezzi, M.4
Wollheim, C.B.5
-
39
-
-
0037371120
-
Hepatocyte nuclear factor 1 alpha: A key mediator of the effect of bile acids on gene expression
-
Jung,D. and Kullak-Ublick,G.A. (2003) Hepatocyte nuclear factor 1 alpha: a key mediator of the effect of bile acids on gene expression. Hepatology, 37, 622-631.
-
(2003)
Hepatology
, vol.37
, pp. 622-631
-
-
Jung, D.1
Kullak-Ublick, G.A.2
-
40
-
-
0027967799
-
LFB1/HNF1 acts as a repressor of its own transcription
-
Piaggio,G., Tomei,L., Toniatti,C., De Francesco,R., Gerstner,J. and Cortese,R. (1994) LFB1/HNF1 acts as a repressor of its own transcription. Nucleic Acids Res., 22, 4284-4290.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4284-4290
-
-
Piaggio, G.1
Tomei, L.2
Toniatti, C.3
De Francesco, R.4
Gerstner, J.5
Cortese, R.6
-
41
-
-
0035674315
-
A role for HNF-3 in the regulation of the HNF-1 gene of the Atlantic salmon
-
Stenson-Cox,C., McNair,A., Curley,M., Smith,T. and Gannon,F. (2002) A role for HNF-3 in the regulation of the HNF-1 gene of the Atlantic salmon. Mol. Genet. Genomics, 266, 832-837.
-
(2002)
Mol. Genet. Genomics
, vol.266
, pp. 832-837
-
-
Stenson-Cox, C.1
McNair, A.2
Curley, M.3
Smith, T.4
Gannon, F.5
-
42
-
-
0034892164
-
Mutations in the human genes encoding the transcription factors of the hepatocyte nuclear factor (HNF)1 and HNF4 families: Functional and pathological consequences
-
Ryffel,G.U. (2001) Mutations in the human genes encoding the transcription factors of the hepatocyte nuclear factor (HNF)1 and HNF4 families: Functional and pathological consequences. J. Mol. Endocrinol., 27, 11-29.
-
(2001)
J. Mol. Endocrinol
, vol.27
, pp. 11-29
-
-
Ryffel, G.U.1
-
43
-
-
2342544921
-
C/EBPalpha mutations in acute myeloid leukaemias
-
Nerlov,C. (2004) C/EBPalpha mutations in acute myeloid leukaemias. Nat. Rev. Cancer, 4, 394-400.
-
(2004)
Nat. Rev. Cancer
, vol.4
, pp. 394-400
-
-
Nerlov, C.1
-
44
-
-
33746861562
-
C/EBPalpha: A tumour suppressor in multiple tissues?
-
Schuster,M.B. and Porse,B.T. (2006) C/EBPalpha: A tumour suppressor in multiple tissues? Biochim. Biophys. Acta, 1766, 88-103.
-
(2006)
Biochim. Biophys. Acta
, vol.1766
, pp. 88-103
-
-
Schuster, M.B.1
Porse, B.T.2
-
45
-
-
0034982567
-
Transcription factors that regulate growth and differentiation of myeloid cells
-
Nagamura-Inoue,T., Tamura,T. and Ozato,K. (2001) Transcription factors that regulate growth and differentiation of myeloid cells. Int. Rev. Immunol., 20, 83-105.
-
(2001)
Int. Rev. Immunol
, vol.20
, pp. 83-105
-
-
Nagamura-Inoue, T.1
Tamura, T.2
Ozato, K.3
-
46
-
-
0037192194
-
Direct physical interactions between HNF-4 and Sp1 mediate synergistic transactivation of the apolipoprotein CIII promoter
-
Kardassis,D., Falvey,E., Tsantili,P., Hadzopoulou-Cladaras,M. and Zannis,V. (2002) Direct physical interactions between HNF-4 and Sp1 mediate synergistic transactivation of the apolipoprotein CIII promoter. Biochemistry, 41, 1217-1228.
-
(2002)
Biochemistry
, vol.41
, pp. 1217-1228
-
-
Kardassis, D.1
Falvey, E.2
Tsantili, P.3
Hadzopoulou-Cladaras, M.4
Zannis, V.5
-
47
-
-
11144354399
-
SREBP-1 interacts with hepatocyte nuclear factor-4 alpha and interferes with PGC-1 recruitment to suppress hepatic gluconeogenic genes
-
Yamamoto,T., Shimano,H., Nakagawa,Y., Ide,T., Yahagi,N., Matsuzaka,T., Nakakuki,M., Takahashi,A., Suzuki,H., Sone,H. et al. (2004) SREBP-1 interacts with hepatocyte nuclear factor-4 alpha and interferes with PGC-1 recruitment to suppress hepatic gluconeogenic genes. J. Biol. Chem., 279, 12027-12035.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 12027-12035
-
-
Yamamoto, T.1
Shimano, H.2
Nakagawa, Y.3
Ide, T.4
Yahagi, N.5
Matsuzaka, T.6
Nakakuki, M.7
Takahashi, A.8
Suzuki, H.9
Sone, H.10
-
48
-
-
0141481010
-
Sterol regulatory element-binding protein-2 interacts with hepatocyte nuclear factor-4 to enhance sterol isomerase gene expression in hepatocytes
-
Misawa,K., Horiba,T., Arimura,N., Hirano,Y., Inoue,J., Emoto,N., Shimano,H., Shimizu,M. and Sato,R. (2003) Sterol regulatory element-binding protein-2 interacts with hepatocyte nuclear factor-4 to enhance sterol isomerase gene expression in hepatocytes. J. Biol. Chem., 278, 36176-36182.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 36176-36182
-
-
Misawa, K.1
Horiba, T.2
Arimura, N.3
Hirano, Y.4
Inoue, J.5
Emoto, N.6
Shimano, H.7
Shimizu, M.8
Sato, R.9
-
49
-
-
0031590813
-
Functional association between CBP and HNF4 in trans-activation
-
Yoshida,E., Aratani,S., Itou,H., Miyagishi,M., Takiguchi,M., Osumu,T., Murakami,K. and Fukamizu,A. (1997) Functional association between CBP and HNF4 in trans-activation. Biochem. Biophys. Res. Commun., 241, 664-669.
-
(1997)
Biochem. Biophys. Res. Commun
, vol.241
, pp. 664-669
-
-
Yoshida, E.1
Aratani, S.2
Itou, H.3
Miyagishi, M.4
Takiguchi, M.5
Osumu, T.6
Murakami, K.7
Fukamizu, A.8
-
50
-
-
0035900778
-
Foxa3 (hepatocyte nuclear factor 3gamma) is required for the regulation of hepatic GLUT2 expression and the maintenance of glucose homeostasis during a prolonged fast
-
Shen,W., Scearce,L.M., Brestelli,J.E., Sund,N.J. and Kaestner,K.H. (2001) Foxa3 (hepatocyte nuclear factor 3gamma) is required for the regulation of hepatic GLUT2 expression and the maintenance of glucose homeostasis during a prolonged fast. J. Biol. Chem., 276, 42812-42817.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 42812-42817
-
-
Shen, W.1
Scearce, L.M.2
Brestelli, J.E.3
Sund, N.J.4
Kaestner, K.H.5
-
51
-
-
2342494314
-
Role of hepatocyte nuclear factor 3 gamma in the expression of human CYP2C genes
-
Bort,R., Gomez-Lechon,M.J., Castell,J.V. and Jover,R. (2004) Role of hepatocyte nuclear factor 3 gamma in the expression of human CYP2C genes. Arch. Biochem. Biophys., 426, 63-72.
-
(2004)
Arch. Biochem. Biophys
, vol.426
, pp. 63-72
-
-
Bort, R.1
Gomez-Lechon, M.J.2
Castell, J.V.3
Jover, R.4
-
52
-
-
0038745433
-
Transcriptional regulation of human CYP3A4 basal expression by CCAAT enhancer-binding protein alpha and hepatocyte nuclear factor-3 gamma
-
Rodriguez-Antona,C., Bort,R., Jover,R., Tindberg,N., Ingelman-Sundberg,M., Gomez-Lechon,M.J. and Castell,J.V. (2003) Transcriptional regulation of human CYP3A4 basal expression by CCAAT enhancer-binding protein alpha and hepatocyte nuclear factor-3 gamma. Mol. Pharmacol., 63, 1180-1189.
-
(2003)
Mol. Pharmacol
, vol.63
, pp. 1180-1189
-
-
Rodriguez-Antona, C.1
Bort, R.2
Jover, R.3
Tindberg, N.4
Ingelman-Sundberg, M.5
Gomez-Lechon, M.J.6
Castell, J.V.7
|