Structure, modifications and ligand-binding properties of rat profilin 2a

Acta Crystallographica Section D: Biological Crystallography

Volumn 65, Issue 4, 2009, Pages 303-311

  Haikarainen, Teemu ^a,c   Chen, Wei Qiang ^b   Lubec, Gert ^b   Kursula, Petri ^a  

^a UNIVERSITY OF OULU   (Finland)

^b MEDICAL UNIVERSITY OF VIENNA   (Austria)

^c UNIVERSITY OF TURKU   (Finland)

Author keywords

Ligand binding; Profilin 2a

Indexed keywords

CYSTEINE; CYTOSKELETON PROTEIN; DYNAMIN I; HYBRID PROTEIN; ISOPROTEIN; LIGAND; PALLADIN PROTEIN, HUMAN; PEPTIDE FRAGMENT; PFN2 PROTEIN, RAT; PHOSPHOPROTEIN; PROFILIN;

ANIMAL; ARTICLE; CALORIMETRY; CHEMICAL STRUCTURE; CHEMISTRY; COMPARATIVE STUDY; HIPPOCAMPUS; HUMAN; METABOLISM; MOUSE; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN CONFORMATION; RAT; SPECTROFLUOROMETRY; STRUCTURE ACTIVITY RELATION; SURFACE PLASMON RESONANCE; SYNTHESIS; X RAY CRYSTALLOGRAPHY;

ANIMALS; CALORIMETRY; CRYSTALLOGRAPHY, X-RAY; CYSTEINE; CYTOSKELETAL PROTEINS; DYNAMIN I; HIPPOCAMPUS; HUMANS; LIGANDS; MICE; MODELS, MOLECULAR; PEPTIDE FRAGMENTS; PHOSPHOPROTEINS; PROFILINS; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN INTERACTION MAPPING; PROTEIN ISOFORMS; RATS; RECOMBINANT FUSION PROTEINS; SPECTROMETRY, FLUORESCENCE; STRUCTURE-ACTIVITY RELATIONSHIP; SURFACE PLASMON RESONANCE;

MAMMALIA; RATTUS;

EID: 63149184811     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S0907444909000699     Document Type: Article

References (43)

1. Adams, P. D., Grosse-Kunstleve, R. W., Hung, L.-W., Ioerger, T. R., McCoy, A. J., Moriarty, N. W., Read, R. J., Sacchettini, J. C., Sauter, N. K. & Terwilliger, T. C. (2002). Acta Cryst. D58, 1948-1954.
2. Babich, M., Foti, L. R., Sykaluk, L. L. & Clark, C. R. (1996). Biochem. Biophys. Res. Commun. 218, 125-131.
3. Babich, M., Foti, L. R., Wong, L. & Pack, G. R. (2005). Proc. West. Pharmacol. Soc. 48, 39-43.
4. Birbach, A. (2008). Bioessays, 30, 994-1002.
5. Boukhelifa, M., Moza, M., Johansson, T., Rachlin, A., Parast, M., Huttelmaier, S., Roy, P., Jockusch, B. M., Carpen, O., Karlsson, R. & Otey, C. A. (2006). FEBS J. 273, 26-33.
6. Carugo, O., Cemazar, M., Zahariev, S., Hudaky, I., Gaspari, Z., Perczel, A. & Pongor, S. (2003). Protein Eng. 16, 637-639.
7. Chen, W. Q., Kang, S. U. & Lubec, G. (2006). Nature Protoc. 1, 1446-1452.
8. Da Silva, J. S., Medina, M., Zuliani, C., Di Nardo, A., Witke, W. & Dotti, C. G. (2003). J. Cell Biol. 162, 1267-1279.
9. Nardo, A., Gareus, R., Kwiatkowski, D. & Witke,W. (2000). J. Cell Sci. 113, 3795-3803.
10. Emsley, P. & Cowtan, K. (2004). Acta Cryst. D60, 2126-2132.
11. Fedorov, A. A., Magnus, K. A., Graupe, M. H., Lattman, E. E., Pollard, T. D. & Almo, S. C. (1994). Proc. Natl Acad. Sci. USA, 91, 8636-8640.
12. Ferron, F., Rebowski, G., Lee, S. H. & Dominguez, R. (2007). EMBO J. 26, 4597-4606.
13. Fratelli, M., Demol, H., Puype, M., Casagrande, S., Eberini, I., Salmona, M., Bonetto, V., Mengozzi, M., Duffieux, F., Miclet, E., Bachi, A., Vandekerckhove, J., Gianazza, E. & Ghezzi, P. (2002). Proc. Natl Acad. Sci. USA, 99, 3505-3510.
14. Gareus, R., Di Nardo, A., Rybin, V. & Witke, W. (2006). J. Biol. Chem. 281, 2803-2811.
15. Goldschmidt-Clermont, P. J., Furman, M. I.,Wachsstock, D., Safer, D., Nachmias, V. T. & Pollard, T. D. (1992). Mol. Biol. Cell, 3, 1015-1024.
16. Gyorgy, B., Toth, E., Tarcsa, E., Falus, A. & Buzas, E. I. (2006). Int. J. Biochem. Cell Biol. 38, 1662-1677.
17. Honore, B., Madsen, P., Andersen, A. H. & Leffers, H. (1993). FEBS Lett. 330, 151-155.
18. Kabsch, W. (1993). J. Appl. Cryst. 26, 795-800.
19. Kang, F., Purich, D. L. & Southwick, F. S. (1999). J. Biol. Chem. 274, 36963-36972.
20. Kursula, I., Kursula, P., Ganter, M., Panjikar, S., Matuschewski, K. & Schüler, H. (2008). Structure, 16, 1638-1648.
21. Kursula, P. (2004). J. Appl. Cryst. 37, 347-348.
22. Kursula, P., Kursula, I., Massimi, M., Song, Y. H., Downer, J., Stanley, W. A., Witke, W. & Wilmanns, M. (2008). J. Mol. Biol. 375, 270-290.
23. Lambrechts, A., Braun, A., Jonckheere, V., Aszodi, A., Lanier, L. M., Robbens, J., Van Colen, I., Vandekerckhove, J., Fassler, R. & Ampe, C. (2000). Mol. Cell. Biol. 20, 8209-8219.
24. Lambrechts, A., Jonckheere, V., Dewitte, D., Vandekerckhove, J. & Ampe, C. (2002). BMC Biochem. 3, 12.
25. Lassing, I. & Lindberg, U. (1985). Nature (London), 314, 472-474.
26. Lassing, I., Schmitzberger, F., Bjornstedt, M., Holmgren, A., Nordlund, P., Schutt, C. E. & Lindberg, U. (2007). J. Mol. Biol. 370, 331-348.
27. Lindner, H. & Helliger, W. (2001). Exp. Gerontol. 36, 1551-1563.
28. Loomis, P. A., Zheng, L., Sekerkova, G., Changyaleket, B., Mugnaini, E. & Bartles, J. R. (2003). J. Cell Biol. 163, 1045-1055.
29. Majava, V., Loytynoja, N., Chen, W. Q., Lubec, G. & Kursula, P. (2008). FEBS J. 275, 4583-4596.
30. Mittermann, I., Fetrow, J. S., Schaak, D. L., Almo, S. C., Kraft, D., Heberle-Bors, E. & Valenta, R. (1998). Sex. Plant Reprod. 11, 183-191.
31. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
32. Nodelman, I. M., Bowman, G. D., Lindberg, U. & Schutt, C. E. (1999). J. Mol. Biol. 294, 1271-1285.
33. Perelroizen, I., Marchand, J. B., Blanchoin, L., Didry, D. & Carlier, M. F. (1994). Biochemistry, 33, 8472-8478.
34. Petrella, E. C., Machesky, L. M., Kaiser, D. A. & Pollard, T. D. (1996). Biochemistry, 35, 16535-16543.
35. Pilo Boyl, P., Di Nardo, A., Mulle, C., Sassoe-Pognetto, M., Panzanelli, P., Mele, A., Kneussel, M., Costantini, V., Perlas, E., Massimi, M., Vara, H., Giustetto, M. & Witke, W. (2007). EMBO J. 26, 2991-3002.
36. Ronty, M., Taivainen, A., Moza, M., Otey, C. A. & Carpen, O. (2004). FEBS Lett. 566, 30-34.
37. Tanaka, M. & Shibata, H. (1985). Eur. J. Biochem. 151, 291-297.
38. Vagin, A. & Teplyakov, A. (1997). J. Appl. Cryst. 30, 1022-1025.
39. Vorum, H., Ostergaard, M., Hensechke, P., Enghild, J. J., Riazati, M. & Rice, G. E. (2004). Proteomics, 4, 861-867.
40. Witke, W. (2004). Trends Cell Biol. 14, 461-469.
41. Witke, W., Podtelejnikov, A. V., Di Nardo, A., Sutherland, J. D., Gurniak, C. B., Dotti, C. & Mann, M. (1998). EMBO J. 17, 967-976.
42. Wopfner, N., Willeroidee, M., Hebenstreit, D., van Ree, R., Aalbers, M., Briza, P., Thalhamer, J., Ebner, C., Richter, K. & Ferreira, F. (2002). Biol. Chem. 383, 1779-1789.
43. Wouters, M. A., George, R. A. & Haworth, N. L. (2007). Curr. Protein Pept. Sci. 8, 484-495.