-
1
-
-
18744382506
-
ProtTest: selection of best-fit models of protein evolution
-
Abascal F., Zardoya R., and Posada D. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21 (2005) 2104-2105
-
(2005)
Bioinformatics
, vol.21
, pp. 2104-2105
-
-
Abascal, F.1
Zardoya, R.2
Posada, D.3
-
3
-
-
0032555240
-
Antarctic fish hemoglobins: evidence for adaptive evolution at subzero temperature
-
Bargelloni L., Marcato S., and Patarnello T. Antarctic fish hemoglobins: evidence for adaptive evolution at subzero temperature. Proc. Natl. Acad. Sci. U. S. A. 95 (1998) 8670-8675
-
(1998)
Proc. Natl. Acad. Sci. U. S. A.
, vol.95
, pp. 8670-8675
-
-
Bargelloni, L.1
Marcato, S.2
Patarnello, T.3
-
4
-
-
33344471384
-
Evolutionary fate of duplicate genes encoding aspartic proteinases. Nothepsin case study
-
Borrelli L., De Stasio R., Filosa S., Parisi E., Riggio M., Scudiero R., and Trinchella F. Evolutionary fate of duplicate genes encoding aspartic proteinases. Nothepsin case study. Gene 368 (2006) 101-109
-
(2006)
Gene
, vol.368
, pp. 101-109
-
-
Borrelli, L.1
De Stasio, R.2
Filosa, S.3
Parisi, E.4
Riggio, M.5
Scudiero, R.6
Trinchella, F.7
-
5
-
-
0014885431
-
Evolution of serum protein polymorphisms
-
Buettner-Janusch J. Evolution of serum protein polymorphisms. Annu. Rev. Genet. 4 (1970) 47-68
-
(1970)
Annu. Rev. Genet.
, vol.4
, pp. 47-68
-
-
Buettner-Janusch, J.1
-
6
-
-
33645111877
-
Natural resistance, iron and infection: a challenge for clinical medicine
-
Bullen J.J., Rogers H.J., Spalding P.B., and Ward C.G. Natural resistance, iron and infection: a challenge for clinical medicine. J. Med. Microbiol. 55 (2006) 251-258
-
(2006)
J. Med. Microbiol.
, vol.55
, pp. 251-258
-
-
Bullen, J.J.1
Rogers, H.J.2
Spalding, P.B.3
Ward, C.G.4
-
7
-
-
2942558757
-
Adaptive evolution and functional divergence of pepsin gene family
-
Carginale V., Trinchella F., Capasso C., Scudiero R., Riggio M., and Parisi E. Adaptive evolution and functional divergence of pepsin gene family. Gene 333 (2004) 81-90
-
(2004)
Gene
, vol.333
, pp. 81-90
-
-
Carginale, V.1
Trinchella, F.2
Capasso, C.3
Scudiero, R.4
Riggio, M.5
Parisi, E.6
-
8
-
-
0028370573
-
Polymorphism in the coding sequence of the horse transferrin gene
-
Carpenter M.A., and Broad T.E. Polymorphism in the coding sequence of the horse transferrin gene. Genome 37 (1993) 157-164
-
(1993)
Genome
, vol.37
, pp. 157-164
-
-
Carpenter, M.A.1
Broad, T.E.2
-
9
-
-
0028986839
-
Genomic remnants of alpha-globin genes in the hemoglobinless antarctic icefishes
-
Cocca E., Ratnayake-Lecamwasam M., Parker S.K., Camardella L., Ciaramella M., di Prisco G., and Detrich III H.W. Genomic remnants of alpha-globin genes in the hemoglobinless antarctic icefishes. Proc. Natl. Acad. Sci. U. S. A. 92 (1995) 1817-1821
-
(1995)
Proc. Natl. Acad. Sci. U. S. A.
, vol.92
, pp. 1817-1821
-
-
Cocca, E.1
Ratnayake-Lecamwasam, M.2
Parker, S.K.3
Camardella, L.4
Ciaramella, M.5
di Prisco, G.6
Detrich III, H.W.7
-
10
-
-
0037202384
-
An algorithm for detecting directional and non-directional positive selection, neutrality and negative selection in protein coding DNA sequences
-
Creevey C., and McInerney O. An algorithm for detecting directional and non-directional positive selection, neutrality and negative selection in protein coding DNA sequences. Gene 300 (2002) 43-51
-
(2002)
Gene
, vol.300
, pp. 43-51
-
-
Creevey, C.1
McInerney, O.2
-
11
-
-
77956743709
-
-
Farrell A.P., and Steffenson J.F. (Eds), Elsevier Academic Press, San Diego, CA
-
DeVries A.L.C., and C.-H.C. In: Farrell A.P., and Steffenson J.F. (Eds). Antifreeze Proteins and Organismal Freezing Avoidance in Polar Fishes. Fish physiolog series, the physiology of polar fishes vol. 22 (2005), Elsevier Academic Press, San Diego, CA 155-201
-
(2005)
Fish physiolog series, the physiology of polar fishes
, vol.22
, pp. 155-201
-
-
DeVries, A.L.C.1
-
13
-
-
0035057075
-
Molecular evolution of transferrin: evidence for positive selection in salmonids
-
Ford M.J. Molecular evolution of transferrin: evidence for positive selection in salmonids. Mol. Biol. Evol. 18 (2001) 639-647
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 639-647
-
-
Ford, M.J.1
-
14
-
-
0033150393
-
Natural selection promotes divergence of transferrin among salmonid species
-
Ford M.J., Thornton P.J., and Park L.K. Natural selection promotes divergence of transferrin among salmonid species. Mol. Ecol. 8 (1999) 1055-1061
-
(1999)
Mol. Ecol.
, vol.8
, pp. 1055-1061
-
-
Ford, M.J.1
Thornton, P.J.2
Park, L.K.3
-
15
-
-
0015289880
-
The maintenance of transferrin polymorphism in pigeons
-
Frelinger J.A. The maintenance of transferrin polymorphism in pigeons. Proc. Natl. Acad. Sci. U. S. A. 69 (1972) 326-329
-
(1972)
Proc. Natl. Acad. Sci. U. S. A.
, vol.69
, pp. 326-329
-
-
Frelinger, J.A.1
-
16
-
-
43349087708
-
Representing structural information with RasMol
-
Chapter 5:Unit 5.4
-
Goodsell D.S. Representing structural information with RasMol. Curr. Protoc. Bioinformatics (2005) Chapter 5:Unit 5.4
-
(2005)
Curr. Protoc. Bioinformatics
-
-
Goodsell, D.S.1
-
17
-
-
0032728408
-
Statistical methods for testing functional divergence after gene duplication
-
Gu X. Statistical methods for testing functional divergence after gene duplication. Mol. Biol. Evol. 16 (1999) 1664-1674
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1664-1674
-
-
Gu, X.1
-
19
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck J.P., and Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17 (2001) 754-755
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
21
-
-
0023764283
-
Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection
-
Hughes A.L., and Nei M. Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection. Nature 335 (1988) 167-170
-
(1988)
Nature
, vol.335
, pp. 167-170
-
-
Hughes, A.L.1
Nei, M.2
-
22
-
-
34047222491
-
Rapid evolution of outer egg membrane proteins in the Drosophila melanogaster subgroup: a case of ecologically driven evolution of female reproductive traits
-
Jagadeeshan S., and Singh R.S. Rapid evolution of outer egg membrane proteins in the Drosophila melanogaster subgroup: a case of ecologically driven evolution of female reproductive traits. Mol Biol Evol. 24 (2007) 929-938
-
(2007)
Mol Biol Evol.
, vol.24
, pp. 929-938
-
-
Jagadeeshan, S.1
Singh, R.S.2
-
23
-
-
85040275866
-
-
Prentice-Hall, Englewood Cliffs, New Jersey
-
Kennett J.P. Marine Geology (1982), Prentice-Hall, Englewood Cliffs, New Jersey
-
(1982)
Marine Geology
-
-
Kennett, J.P.1
-
24
-
-
0036139211
-
MEGA2: Molecular Evolutionary Genetics Analysis software
-
Kumar S., Tamura K., Jakobsen I.B., and Nei M. MEGA2: Molecular Evolutionary Genetics Analysis software. Bioinformatics 17 (2001) 1244-1245
-
(2001)
Bioinformatics
, vol.17
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
26
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin M.A., Blackshields G., Brown N.P., Chenna R., McGettigan P.A., McWilliam H., Valentin F., Wallace I.M., Wilm A., Lopez R., Thompson J.D., Gibson T.J., and Higgins D.G. Clustal W and Clustal X version 2.0. Bioinformatics 23 (2007) 2947-2948
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
27
-
-
0035575244
-
Characterization of a single nucleotide polymorphism in the coding sequence of the bovine transferrin gene
-
Laurent P., and Rodellar C. Characterization of a single nucleotide polymorphism in the coding sequence of the bovine transferrin gene. Mutat. Res. Genomics 458 (2001) 1-5
-
(2001)
Mutat. Res. Genomics
, vol.458
, pp. 1-5
-
-
Laurent, P.1
Rodellar, C.2
-
28
-
-
0032423323
-
Molecular cloning and evolution of transferrin cDNAs in salmonids
-
Lee J.Y., Tada T., Hirono I., and Aoki. Molecular cloning and evolution of transferrin cDNAs in salmonids. Mol. Mar. Biol. Biotech. 7 (1998) 287-293
-
(1998)
Mol. Mar. Biol. Biotech.
, vol.7
, pp. 287-293
-
-
Lee, J.Y.1
Tada, T.2
Hirono, I.3
Aoki4
-
29
-
-
20144373868
-
Mutational analysis of C-lobe ligands of human serum transferrin: insights into the mechanism of iron release
-
Mason A.B., Halbrooks P.J., James N.G., Connolly S.A., Larouche J.R., Smith V.C., MacGillivray R.T., and Chasteen N.D. Mutational analysis of C-lobe ligands of human serum transferrin: insights into the mechanism of iron release. Biochemistry 44 (2005) 8013-8021
-
(2005)
Biochemistry
, vol.44
, pp. 8013-8021
-
-
Mason, A.B.1
Halbrooks, P.J.2
James, N.G.3
Connolly, S.A.4
Larouche, J.R.5
Smith, V.C.6
MacGillivray, R.T.7
Chasteen, N.D.8
-
30
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
Nei M., and Gojobori T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 3 (1986) 418-426
-
(1986)
Mol. Biol. Evol.
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
32
-
-
0012141794
-
Positive Darwinian selection operating on the immunoglobulin heavy chain of Antarctic fishes
-
Ota T., Nguyen T.A., Huang E., Detrich III H.W., and Amemiya C.T. Positive Darwinian selection operating on the immunoglobulin heavy chain of Antarctic fishes. J. Exp. Zoolog. B Mol. Dev. Evol. 295 (2003) 45-58
-
(2003)
J. Exp. Zoolog. B Mol. Dev. Evol.
, vol.295
, pp. 45-58
-
-
Ota, T.1
Nguyen, T.A.2
Huang, E.3
Detrich III, H.W.4
Amemiya, C.T.5
-
33
-
-
0029975032
-
A mechanism for iron uptake by transferrin
-
Pakdaman R., and El Hage Chahine J.M. A mechanism for iron uptake by transferrin. Eur. J. Biochem. 236 (1996) 922-931
-
(1996)
Eur. J. Biochem.
, vol.236
, pp. 922-931
-
-
Pakdaman, R.1
El Hage Chahine, J.M.2
-
34
-
-
33645801980
-
Natural selection and molecular evolution in primate PAX9 gene, a major determinant of tooth development
-
Pereira T.V., Salzano F.M., Mostowska A., Trzeciak W.H., Ruiz-Linares A., Chies J.A., Saavedra C., Nagamachi C., Hurtado A.M., Hill K., Castro-de-Guerra D., Silva-Júnior W.A., and Bortolini M.C. Natural selection and molecular evolution in primate PAX9 gene, a major determinant of tooth development. Proc. Natl. Acad. Sci. U. S. A. 103 (2006) 5676-5681
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 5676-5681
-
-
Pereira, T.V.1
Salzano, F.M.2
Mostowska, A.3
Trzeciak, W.H.4
Ruiz-Linares, A.5
Chies, J.A.6
Saavedra, C.7
Nagamachi, C.8
Hurtado, A.M.9
Hill, K.10
Castro-de-Guerra, D.11
Silva-Júnior, W.A.12
Bortolini, M.C.13
-
35
-
-
0028130858
-
Serum iron levels in farmed Atlantic salmon: family variation and associations with disease resistance
-
Ravndal J., Løvold T., Bentsen H.B., Røed K.H., Gjedrem T., and Rørvik K.A. Serum iron levels in farmed Atlantic salmon: family variation and associations with disease resistance. Aquaculture 125 (1994) 37-45
-
(1994)
Aquaculture
, vol.125
, pp. 37-45
-
-
Ravndal, J.1
Løvold, T.2
Bentsen, H.B.3
Røed, K.H.4
Gjedrem, T.5
Rørvik, K.A.6
-
36
-
-
0001063415
-
Vertebrates without erythrocytes and blood pigment
-
Ruud J.T. Vertebrates without erythrocytes and blood pigment. Nature 173 (1954) 848-850
-
(1954)
Nature
, vol.173
, pp. 848-850
-
-
Ruud, J.T.1
-
37
-
-
14544281087
-
Positive selection of primate TRIM5alpha identifies a critical species-specific retroviral restriction domain
-
Sawyer S.L., Wu L.I., Emerman M., and Malik H.S. Positive selection of primate TRIM5alpha identifies a critical species-specific retroviral restriction domain. Proc. Natl. Acad. Sci. U. S. A. 102 (2005) 2832-2837
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 2832-2837
-
-
Sawyer, S.L.1
Wu, L.I.2
Emerman, M.3
Malik, H.S.4
-
38
-
-
34250898026
-
Structure and expression of genes involved in transport and storage of iron in red-blooded and hemoglobin-less antarctic notothenioids
-
Scudiero R., Trinchella F., Riggio M., and Parisi E. Structure and expression of genes involved in transport and storage of iron in red-blooded and hemoglobin-less antarctic notothenioids. Gene 397 (2007) 1-11
-
(2007)
Gene
, vol.397
, pp. 1-11
-
-
Scudiero, R.1
Trinchella, F.2
Riggio, M.3
Parisi, E.4
-
39
-
-
34047226877
-
A model of directional selection applied to the evolution of drug resistance in HIV-1
-
Seoighe C., Ketwaroo F., Pillay V., Scheffler K., Wood N., Duffet R., Zvelebil M., Martinson N., McIntyre J., Morris L., and Hide W. A model of directional selection applied to the evolution of drug resistance in HIV-1. Mol. Biol. Evol. 24 (2007) 1025-1031
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1025-1031
-
-
Seoighe, C.1
Ketwaroo, F.2
Pillay, V.3
Scheffler, K.4
Wood, N.5
Duffet, R.6
Zvelebil, M.7
Martinson, N.8
McIntyre, J.9
Morris, L.10
Hide, W.11
-
40
-
-
0034200269
-
Life at body temperatures below 0 degrees C: the physiology and biochemistry of Antarctic fishes
-
Sidell B.D. Life at body temperatures below 0 degrees C: the physiology and biochemistry of Antarctic fishes. Gravit. Space Biol. Bull. 13 (2000) 25-34
-
(2000)
Gravit. Space Biol. Bull.
, vol.13
, pp. 25-34
-
-
Sidell, B.D.1
-
41
-
-
33845206135
-
The evolution of thermal adaptation in polar fish
-
Verde C., Parisi E., and di Prisco G. The evolution of thermal adaptation in polar fish. Gene 385 (2006) 137-14
-
(2006)
Gene
, vol.385
, pp. 137-14
-
-
Verde, C.1
Parisi, E.2
di Prisco, G.3
-
42
-
-
0025375620
-
A comparison of the structure and properties of normal human transferrin and a genetic variant of human transferrin
-
Welch S., and Langmead L. A comparison of the structure and properties of normal human transferrin and a genetic variant of human transferrin. Int. J. Biochem. 22 (1990) 275-282
-
(1990)
Int. J. Biochem.
, vol.22
, pp. 275-282
-
-
Welch, S.1
Langmead, L.2
-
43
-
-
3042635183
-
Positive selection on multiple antique allelic lineages of transferrin in the polyploid Carassius auratus
-
Yang L., and Gui J.F. Positive selection on multiple antique allelic lineages of transferrin in the polyploid Carassius auratus. Mol. Biol. Evol. 21 (2004) 1264-1277
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 1264-1277
-
-
Yang, L.1
Gui, J.F.2
-
44
-
-
3042522293
-
Molecular basis of transferrin polymorphism in goldfish (Carassius auratus)
-
Yang L., Zhou L., and Gui J.F. Molecular basis of transferrin polymorphism in goldfish (Carassius auratus). Genetica 121 (2004) 303-313
-
(2004)
Genetica
, vol.121
, pp. 303-313
-
-
Yang, L.1
Zhou, L.2
Gui, J.F.3
-
45
-
-
0030774732
-
A kinetically active site in the C-lobe of human transferrin
-
Zak O., Tam B., MacGillivray R.T., and Aisen P. A kinetically active site in the C-lobe of human transferrin. Biochemistry 36 (1997) 11036-11043
-
(1997)
Biochemistry
, vol.36
, pp. 11036-11043
-
-
Zak, O.1
Tam, B.2
MacGillivray, R.T.3
Aisen, P.4
|