Specific PCR assays for the detection of Trichoderma harzianum causing green mold disease during mushroom cultivation

Mycoscience

Volumn 50, Issue 2, 2009, Pages 94-99

  Miyazaki, Kazuhiro ^a   Tsuchiya, Yuki ^b   Okuda, Toru ^b  

^a FORESTRY AND FOREST PRODUCTS RESEARCH INSTITUTE   (Japan)

^b TAMAGAWA UNIVERSITY   (Japan)

Author keywords

Nested PCR; Specific PCR assay; Trichoderma harzianum

Indexed keywords

BASIDIOMYCOTA; HYPOCREA LIXII; LENTINULA EDODES; TRICHODERMA;

EID: 62949242440     PISSN: 13403540     EISSN: 16182545     Source Type: Journal    
DOI: 10.1007/s10267-008-0460-2     Document Type: Article

References (19)

1. I.S. Druzhinina A.G. Kopchinshiy M. Komon J. Bissett G. Szakacs C.P. Kubicek 2005 An oligonucleotide barcode for species identification in Trichoderma and Hypocrea Fungal Genet Biol 42 813 828
2. R. Grondona R. Hermosa M. Tejada M.D. Gomis P.D. Bridge E. Monte I. Garcia-Acha 1997 Physiological and biochemical characterization of Trichoderma harzianum, a biological control agent against soilborne fungal plant pathogens Appl Environ Microbiol 63 3189 3198
3. D. Grote A. Olmos A. Kofoet J.J. Tuset E. Bertolini M. Cambra 2002 Specific and sensitive detection of Phytophthora nicotianae by simple and nested-PCR Eur J Plant Pathol 108 197 207
4. P. Konstantinova P. Bonants M. Gent-Pelzer P. Zouwen R. Bulk 2002 Development of specific primers for detection and identification of Alternaria spp. in carrot material by PCR and comparison with blotter and plating assay Mycol Res 106 23 33
5. A. Mazzaglia N. Anselmi A. Gasbarri A. Vannini 2001 Development of a polymerase chain reaction (PCR) assay for the specific detection of Biscogniauxia mediterranea living as an endophyte in oak tissues Mycol Res 105 952 956
6. K. Miyazaki H. Neda 2004 Evaluation of the use of outbred lines for screening of genetic markers in Shiitake (Lentinula edodes) Breed Sci 54 75 78
7. K. Miyazaki M. Tsunoda 2003 Application of DNA markers to research on Trichoderma in mushroom facilities of Japan (1): RAPD, SSCP marker Mushroom Sci Biotechnol 11 65 70
8. K. Miyazaki M. Sunagawa H. Neda M. Tsunoda 1995 The distinction of pathogenicity of the genus Trichoderma and Penicillium: the distinction by paired culture with glass straw (in Japanese) Bull Kyushu Branch Jpn For Soc 48 233 234
9. M.G. Murray W.F. Thompson 1980 Rapid isolation of high molecular weight DNA Nucleic Acids Res 8 4321 4325
10. D. Rinker 1993 Disease management strategies for Trichoderma mould Mushroom World 4 3 5
11. M.B. Rubio M.R. Hermosa E. Keck E. Monte 2005 Specific PCR assay for the detection and quantification of DNA from the biocontrol strain Trichoderma harzianum 2413 in soil Microbial Ecol 49 25 33
12. F. Sanger S. Nicklen A.R. Coulson 1977 DNA sequencing with chainterminating inhibitors Proc Natl Acad Sci U S A 74 5463 5467
13. D. Seaby 1987 Infection of mushroom compost by Trichoderma species Mushroom J 179 355 361
14. J.D. Thompson D.G. Higgins T.J. Gibson 1994 CLUSTAL W: improving the sensitivity of multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673 4680
15. K. Tokimoto 1985 Physiological studies on antagonism between Lentinus edodes and Trichoderma spp. in bedlogs of the former (in Japanese) Rep Tottori Mycol Inst 23 1 54
16. K. Tokimoto M. Komatsu 1975 Effect of carbon and nitrogen sources in media on the hyphal interference between Lentinus edodes and some species of Trichoderma Ann Phytopathol Soc Jpn 45 261 264
17. R. Vilgalys M. Hester 1990 Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species J Bacteriol 172 4238 4246
18. T.J. White T. Bruns S.B. Lee J.W. Taylor 1990
19. D. Zamir I. Chet 1985 Application of enzyme electrophoresis for the identification of isolates in Trichoderma harzianum Can J Microbiol 31 578 580