Molecular phylogeny and systematics of leaf-mining flies (Diptera: Agromyzidae): delimitation of Phytomyza Fallén sensu lato and included species groups, with new insights on morphological and host-use evolution

Systematic Entomology

Volumn 34, Issue 2, 2009, Pages 260-292

  Winkler, Isaac S ^a,c   Scheffer, Sonja J ^b   Mitter, Charles ^a  

^a Bldg 142   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

^c NORTH CAROLINA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ENZYME ACTIVITY; GENE EXPRESSION; HOST USE; LEAFMINER; MORPHOLOGY; PHYLOGENY; TAXONOMY;

AGROMYZIDAE; CHROMATOMYIA; CHROMATOMYIA GRIFFITHSI; CHROMATOMYIA MONTANA; CHROMATOMYIA NIGRELLA; DIPTERA; HEXAPODA; NAPOMYZA; PHYTOMYZA; PHYTOMYZA MANNI;

EID: 62849102864     PISSN: 03076970     EISSN: 13653113     Source Type: Journal    
DOI: 10.1111/j.1365-3113.2008.00462.x     Document Type: Article

References (94)

1. Albach, D.C., Meudt, H.M. Oxelman, B 2005) Piecing together the 'new' Plantaginaceae. American Journal of Botany, 92, 297 315.
2. Angiosperm Phylogeny Group [APG II] (2003) An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG II. Botanical Journal of the Linnean Society, 141, 399 436.
3. Benavent-Corai, J., Martinez, M. Jiménez Peydró, R 2005) Catalogue of the host-plants of the world Agromyzidae (Diptera). Bollettino di Zoologia Agraria e di Bachicoltura, 37 (Suppl 1 97.
4. Berlocher, S.H. Feder, J.L 2002) Sympatric speciation in phytophagous insects: moving beyond controversy? Annual Review of Entomology, 47, 773 815.
5. Braschnikov, W.C 1897) On the biology and systematics of some species of mining Diptera. Moskva Sel'skogo Khozyaistva Institut Izvestiya [Annals of the Moscow Agricultural Institute], 3, 19 43 (in Russian).
6. Collin, J.E 1911) Additions and corrections to the British list of Muscidae acalyptratae. Entomologist's Monthly Magazine, 22, 253 256.
7. Connor, E.F. Taverner, M.P 1997) The evolution and adaptive significance of the leaf-mining habit. Oikos, 79, 6 25.
8. Coquillett, D.W 1910) The type-species of North American genera of Diptera. Proceedings of the United States National Museum, 37, 499 647.
9. Dempewolf, M 2001) Larvalmorphologie und Phylogenie der Agromyzidae (Diptera). PhD Dissertation, University of Bielefeld, Bielefeld [WWW document]. URL http://bieson.ub.uni-bielefeld.de/volltexte/2003/162/pdf/diss.pdf accessed December 2005 2004) Arthropods of Economic Importance - Agromyzidae of the World (CD-ROM). ETI, University of Amsterdam, Amsterdam, the Netherlands.
10. Dempewolf, M 2005) Dipteran leaf miners. Biology, Ecology, and Evolution of Gall-inducing Arthropods (ed. by A. Raman, C. W. Schaefer and T. M. Withers Vol. 1, pp. 407 429. Science Publishers, Plymouth.
11. Fallén, C.F 1823) Phytomyzides et Ochtidiae Suecia. Berlingianus, Lund.
12. Farris, J.S 1974) Formal definitions of paraphyly and polyphyly. Systematic Zoology, 23, 548 554.
13. Feeny, P 1975) Biochemical coevolution between plants and their insect herbivores. Coevolution of Insects and Plants (ed. by L. E. Gilbert and P. H. Raven pp. 3 19. University of Texas Press, Austin.
14. Frick, K.E 1952) A generic revision of the family Agromyzidae (Diptera) with a catalogue of New World species. University of California Publications in Entomology, 8, 339 452.
15. Gaimari, S.D., Adler, L.S. Scheffer, S.J 2004) Plant host affiliation and redescription of Phytomyza subtenella Frost (Diptera: Agromyzidae). Proceedings of the Entomological Society of Washington, 106, 501 507.
16. Godfray, H.C.J 1985) Chromatomyia paraciliata sp.n. (Diptera: Agromyzidae), a leaf-miner of Leucanthemum vulgare from southern England. Entomologist's Gazette, 36, 47 50.
17. Griffiths, G.C.D 1964) The agromyzid fauna of Iceland and the Faeroes, with appendices on the Phytomyza milii and robustella groups (Diptera, Agromyzidae). Entomologiske Meddelelser, 32, 393 450.
18. Griffiths, G.C.D 1966) The Alysiinae (Hym. Braconidae) parasites of the Agromyzidae (Diptera). III. The parasites of Paraphytomyza Enderlein, Phytagromyza Hendel and Phytomyza Fallén. Beiträge zur Entomologie, 16, 775 951.
19. Griffiths, G.C.D 1967) Revision of the Phyomyza syngenesiae group (Diptera, Agromyzidae), including species hitherto known as 'Phytomyza atricornis Meigen'. Stuttgarter Beiträge zur Naturkunde, 177, 1 28.
20. Griffiths, G.C.D 1972a) Studies on boreal Agromyzidae (Diptera). I. Phytomyza miners on Saxifragaceae. Quaestiones Entomologicae, 8, 67 80.
21. Griffiths, G.C.D 1972b) Studies on boreal Agromyzidae (Diptera). II. Phytomyza miners on Senecio, Petasites and Tussilago (Compositae, Senecionae). Quaestiones Entomologicae, 8, 377 405.
22. Griffiths, G.C.D 1973) Studies on boreal Agromyzidae (Diptera). IV. Phytomyza miners on Angelica, Heracleum, Laserpitium and Pastinaca (Umbelliferae). Quaestiones Entomologicae, 9, 219 253.
23. Griffiths, G.C.D 1974a) Studies on boreal Agromyzidae (Diptera). V. On the genus Chromatomyia Hardy, with revision of Caprifoliaceae-mining species. Quaestiones Entomologicae, 10, 35 69.
24. Griffiths, G.C.D 1974b) Studies on boreal Agromyzidae (Diptera). VI. Further Phytomyza miners on Senecioneae (Compositae). Quaestiones Entomologicae, 10, 103 129.
25. Griffiths, G.C.D 1974c) Studies on boreal Agromyzidae (Diptera). VII. A new Chromatomyia miner on Valeriana. Quaestiones Entomologicae, 10, 217 222.
26. Griffiths, G.C.D 1976a) Studies on boreal Agromyzidae (Diptera). XI. Chromatomyia miners on Elaeagnaceae. Quaestiones Entomologicae, 12, 211 216.
27. Griffiths, G.C.D 1976b) Studies on boreal Agromyzidae (Diptera). XII. Phytomyza and Chromatomyia miners on Astereae (Compositae). Quaestiones Entomologicae, 12, 239 278.
28. Griffiths, G.C.D 1980) Studies on boreal Agromyzidae (Diptera). XIV. Chromatomyia miners on monocotyledones. Entomologica Scandinavica, 13 (Suppl 1 61.
29. Hardy, J 1849) On the primrose-leaf miner; with notice of a proposed new genus, and characters of three species of Diptera. Annals and Magazine of Natural History, 4, 385 392.
30. Hendel, F 1920) Die paläarktischen Agromyziden (Prodromus einer Monographie). Archiv für Naturgeschicthe, 84, 109 174.
31. Hendel, F 1927) Beiträge zur Systematik der Agromyziden. Zoologischer Anzeiger, 69, 248 271.
32. Hendel, F 1931 1936) Agromyzidae. Die Fliegen der Palaearktischen Region (ed. by E. Lindner Vol. 59, pp. 1 570. E. Schweizerbart, Stuttgart.
33. Henshaw, D. Howse, D 1989) Revised status of eight species of European Agromyzidae (Diptera) described both as larvae and adults, and four new names for homonyms. Entomologist's Monthly Magazine, 125, 83 84.
34. Iwasaki, A 1996) The Japanese species of Phytomyza (Diptera, Agromyzidae) on Araliaceae, part 1. Leaf-miners on Acanthopanax. Japanese Journal of Entomology, 64, 779 794.
35. Iwasaki, A 1997) The Japanese species of Phytomyza (Diptera, Agromyzidae) on Araliaceae, part 2. Leaf miners on Aralia and Kalopanax. Japanese Journal of Entomology, 65, 177 185.
36. Kulp, L.A 1968) The taxonomic status of dipterous holly leaf miners (Diptera: Agromyzidae). University of Maryland Agricultural Experiment Station Bulletin A, 155, 1 42.
37. Malloch, J.R 1913) A synopsis of the genera of Agromyzidae, with descriptions of new genera and species. Proceedings of the United States National Museum, 46, 127 154.
38. Martinez, M 2004) Family Agromyzidae. Fauna Europaea: Diptera, Brachycera (ed. by T. Pape). Fauna Europaea version 1.3 [WWW document]. URL http://www.faunaeur.org accessed June 2007 Wiegmann, B 1988) The phylogenetic study of adaptive zones: has phytophagy promoted insect diversification? American Naturalist, 132, 107 128.
39. Möhn, E 1961) Gallmücken (Diptera, Itonididae) aus El Salvador. 4. Zur Phylogenie der Asphondyliidi der neotropischen und holarktischen Regionen. Senckenbergiana Biologica, 42, 131 330 [translated for USDA by Amerind Publ. Co., New Delhi, 1985].
40. Moulton, J.K. Wiegmann, B.M 2004) Evolution and phylogenetic utility of CAD (rudimentary) among Mesozoic-aged Eremoneuran Diptera (Insecta). Molecular Phylogenetics and Evolution, 31, 363 378.
41. Nixon, K.C 2002) WinClada ver. 1.00.08. Ithaca, NY. Published by the author [WWW document]. URL http://www.cladistics.com/aboutWinc.htm accessed May 2005 1959) Studien über Minierfliegen (Dipt. Agromyzidae). 3. Revision der in Labiaten und Boraginaceen minierenden Arten aus der Gruppe der Phytomyza obscura Hend., mit einem Beitrag zur Kenntnis ihrer Hymenopteren-Parasiten. Deutsche Entomologische Zeitschrift N. F., 6, 185 229.
42. Nowakowski, J.T 1962) Introduction to a systematic revision of the family Agromyzidae (Diptera) with some remarks on host plant selection by these flies. Annales Zoologici, 28, 67 183.
43. Nowakowski, J.T 1975) Drei neue Arten von Agromyzidae (Diptera) aus dem Pieninengebirge Nationalpark. Annales Zoologici, 32, 407 429.
44. Nylander, J.A.A 2004) MrModeltest version 2. Evolutionary Biology Centre, Uppsala University, Uppsala. Distributed by the author [WWW document]. URL http://www.abc.se/∼nylander/ accessed February 2005 Reeves, P.A 2001) Disintegration of Scrophulariaceae. American Journal of Botany, 88, 348 361.
45. Owen, D.F 1975) The efficiency of blue tits, Parus caerulus, preying on the larvae of Phytomyza ilicis. Ibis, 117, 515 516.
46. Pakalniškis, S 1994) The Lithuanian Agromyzidae (Diptera). Descriptions of 6 new species and other notes. Acta Entomologica Lituanica, 12, 5 33.
47. Pakalniškis, S 1998) On the bionomics and knowledge of Agromyzidae (Diptera) feeding on plant stems. Report 2. Ekologija (Vilnius), 2, 36 42.
48. Pakalniškis, S 2004) The Agromyzidae (Diptera) feeding particularities on some genera of Ranunculaceae. Latvijas Entomologs, 41, 93 99.
49. Papp, L 1984) Family Agromyzidae. Catalogue of Palaearctic Diptera (ed. by A. Soos and L. Papp pp. 263 343. Akadémiai Kiadó, Budapest and Elsevier, Amsterdam.
50. Posada, D. Crandall, K.A 1998) Modeltest: testing the model of DNA substitution. Bioinformatics, 14, 817 818.
51. Regier, J.C 2006) Protocols, Concepts, and Reagents for Preparing DNA Sequencing Templates. Version 11/30/06 [WWW document]. URL www.umbi.umd.edu/ users/jcrlab/PCR-primers.pdf accessed February 2007 et al 2008) Resolving Arthropod phylogeny: exploring phylogenetic signal within 41 kb of protein-coding nuclear gene sequence. Systematic Biology, 57, 920 938.
52. Ronquist, F. Huelsenbeck, J.P 2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572 1574.
53. Sasakawa, M 1956) A new species related to Phytomyza saxifragae Hering. Insecta Matsumura, 19, 105 108.
54. Sasakawa, M 1957) Descriptions of two new Phytomyza-species from Mt. Nachi, Japan (Diptera, Agromyzidae). Akitu, 6, 90 93.
55. Sasakawa, M 1961) A study of the Japanese Agromyzidae (Diptera), 2. Pacific Insects, 3, 307 472.
56. Sasakawa, M 1977) Family Agromyzidae. A Catalog of the Diptera of the Oriental Region (ed. by M. D. Delfinado and D. E. Hardy Vol. 3, pp. 243 269. University of Hawaii Press, Honolulu.
57. Sasakawa, M 1981) Descriptions of three new leaf-mining pests (Diptera: Agromyzidae). Applied Entomology and Zoology, 16, 149 155.
58. Sasakawa, M 1993) Notes on the Japanese Agromyzidae (Diptera), 2. Japanese Journal of Entomology, 61, 341 354.
59. Sasakawa, M. Matsumura, T 1998) Agromyzidae (Diptera) in Insect Museum, National Institute of Agro-environmental Sciences, with the description of seven new species. Bulletin of the National Institute of Agro-Environmental Sciences, 13, 1 17.
60. Scheffer, S.J. Wiegmann, B.M 2000) Molecular phylogenetics of the holly leafminers (Diptera: Agromyzidae: Phytomyza): species limits, speciation, and dietary specialization. Molecular Phylogenetics and Evolution, 17, 244 255.
61. Scheffer, S.J. Winkler, I.S 2008) The first confirmed record of the leafminer Phytomyza rufipes (Diptera: Agromyzidae) in the United States. Proceedings of the Entomological Society of Washington, 110, 674 678.
62. Scheffer, S.J., Winkler, I.S. Wiegmann, B.M 2007) Phylogenetic relationships within the leaf-mining flies (Diptera: Agromyzidae) inferred from sequence data from multiple genes. Molecular Phylogenetics and Evolution, 42, 756 775.
63. Sehgal, V.K 1971) A taxonomic survey of the Agromyzidae (Diptera) of Alberta, Canada, with observations on host-plant relationships. Quaestiones Entomologicae, 7, 291 405.
64. Singh, S. Ipe, I.M 1971) A new agromyzid genus Indonapomza from India. (Agromyzidae: Diptera). Oriental Insects, 5, 570 576.
65. Spencer, K.A 1966a) A clarification of the genus Napomyza Westwood (Diptera: Agromyzidae). Proceedings of the Royal Entomological Society of London B, 35, 29 40.
66. Spencer, K.A 1966b) Notes on European Agromyzidae (Diptera)-1. Beiträge zur Entomologie, 16, 285 309.
67. Spencer, K.A 1969) The Agromyzidae of Canada and Alaska. Memoirs of the Entomological Society of Canada, 64, 1 311.
68. Spencer, K.A 1972) Diptera: Agromyzidae. Handbooks for the Identification of British Insects. Royal Entomological Society, London.
69. Spencer, K.A 1973) Agromyzidae (Diptera) of Economic Importance. Series Entomologica. Dr. W. Junk, the Hague.
70. Spencer, K.A 1976) The Agromyzidae (Diptera) of Fennoscandia and Denmark. Fauna Entomologica Scandinavica. Scandinavian Science Press, Klampenborg.
71. Spencer, K.A 1981) A Revisionary Study of the Leaf-mining Flies (Agromyzidae) of California. Special Publication, Division of Agricultural Sciences. University of California, Berkeley.
72. Spencer, K.A 1982) Agromyzidae (Diptera) in Chile. Stuttgarter Beiträge zur Naturkunde, 357, 1 55.
73. Spencer, K.A 1987) Agromyzidae. Manual of Nearctic Diptera (ed. by J. F. McAlpine, B. V. Peterson, G. E. Shewell, H. J. Teskey, J. R. Vockeroth and D. M. Wood). Agriculture Canada Monograph, 28, 869 879.
74. Spencer, K.A 1990) Host Specialization in the World Agromyzidae (Diptera). Kluwer Academic Publishers, Dordrecht.
75. Spencer, K.A. Martinez, M 1987) Additions and corrections to the Agromyzidae section of the catalogue of Palaearctic Diptera (Papp, 1984). Annales de la Societe Entomologique de France, 23, 253 271.
76. Spencer, K.A. Steyskal, G.C 1986) Manual of the Agromyzidae (Diptera) of the United States. USDA Agriculture Handbook, 638, 478.
77. Steyskal, G.C 1969) Distinction between Phytomyza horticola Goreau and P. syngenesiae (Hardy) (Diptera, Agromyzidae). Entomological News, 80, 301 303.
78. Strong, D.R., Lawton, J.H. Southwood, T.R.E 1984) Insects on Plants. Harvard University Press, Cambridge, MA.
79. Süss, L 1989) Phytomyza trolliicaulis sp.n. (Diptera Agromyzidae) minatrice di Trollius europaeus L. (Ranuncolaceae). Bollettino di Zoologia Agraria e di Bachicoltura, 21, 1 6.
80. Süss, L 2002) Morphological and biological observations on Ptochomyza czernyi (Strobl) new for Italy. Bollettino di Zoologia Agraria e di Bachicoltura, 34, 17 23.
81. Suzuki, Y., Glazko, G.V. Nei, M 2002) Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics. Proceedings of the National Academy of Sciences of the United States of America, 99, 16138 16143.
82. Swofford, D.L 2001) PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods). Sinauer, Sunderland, MA.
83. Thompson, J.D., Higgins, D.G. Gibson, T.J 1994) Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22, 4673 4680.
84. Tschirnhaus, M. von 1969) Zur Kenntnis der Variabilität, Eidonomie und Verwandtschaft bemerkenswerter Agromyzidae (Diptera). Senckenbergiana Biologica, 50, 143 157.
85. Tschirnhaus, M. von 1991) New results on the ecology, morphology, and systematics of Agromyzidae (Diptera). Proceedings of the Second International Congress of Dipterology, 1990 (ed. by L. Weismann, J. Orszagh and A. C. Pont pp. 285 309. SPB Academic Publishers, the Hague.
86. Winkler, I.S. Mitter, C 2008) The phylogenetic dimension of insect-plant interactions: a review of recent evidence. Specialization, Speciation, and Radiation: The Evolutionary Biology of Herbivorous Insects (ed. by K. J. Tilmon pp. 240 263. University of California Press, Berkeley.
87. Zlobin, V.V 1993a) Review of mining flies of the genus Napomyza Westwood (Diptera: Agromyzidae). I. elegans-group. Proceedings of the Zoological Institute of St. Petersburg, 251, 157 176 (in Russian).
88. Zlobin, V.V 1993b) Review of mining flies of the genus Napomyza Westwood (Diptera: Agromyzidae). II. annulipes-group. International Journal of Dipterological Research, 4, 69 80.
89. Zlobin, V.V 1994a) Review of mining flies of the genus Napomyza Westwood (Diptera: Agromyzidae). IV. Palaearctic species of lateralis-group. International Journal of Dipterological Research, 5, 39 78.
90. Zlobin, V.V 1994b) Review of mining flies of the genus Napomyza Westwood (Diptera: Agromyzidae). V. Phytomyza species currently placed in the genus Napomyza Westwood. International Journal of Dipterological Research, 5, 289 311.
91. Zlobin, V.V 1997) Fifteen new species of mining flies (Diptera: Agromyzidae) from North America. International Journal of Dipterological Research, 8, 87 111.
92. Zlobin, V.V 1999) The second species of the genus Gymnophytomyza Hendel (Diptera: Agromyzidae). International Journal of Dipterological Research, 10, 119 127.
93. Zlobin, V.V 2002) First findings of Phytomyza species from Myanmar (Diptera: Agromyzidae). International Journal of Dipterological Research, 13, 61 65.
94. Zwickl, D.J 2006) Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. PhD Dissertation, University of Texas, Austin [WWW document]. URL http://www.bio.utexas.edu/faculty/antisense/GARLI/GARLI.html accessed October 2006 ].