Full-length sequence of genotype 3 hepatitis e virus derived from a pig in Thailand

Journal of Medical Virology

Volumn 81, Issue 4, 2009, Pages 657-664

  Siripanyaphinyo, Uamporn ^a,b   Laohasinnarong, Dusit ^c   Siripanee, Juthamas ^d   Kaeoket, Kampon ^c   Kameoka, Masanori ^a,b   Ikuta, Kazuyoshi ^a,b   Sawanpanyalert, Pathom ^d  

^a Thailand Japan Research Collaboration Center on Emerging and Re emerging Infections (RCC ERT)   (Thailand)

^b OSAKA UNIVERSITY   (Japan)

^c MAHIDOL UNIVERSITY   (Thailand)

^d MINISTRY OF PUBLIC HEALTH   (Thailand)

Author keywords

Anti HEV antibody; Genotype; Hepatitis E virus; Swine

Indexed keywords

IMMUNOGLOBULIN G; VIRUS RNA; HEPATITIS ANTIBODY;

AGRICULTURAL WORKER; ANIMAL EXPERIMENT; ANIMAL MODEL; ARTICLE; CONTROLLED STUDY; HEPATITIS E; HEPATITIS E VIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; POLYADENYLATION; SWINE; THAILAND; VIREMIA; VIRUS DETECTION; VIRUS ISOLATION; VIRUS STRAIN; ANIMAL; ANIMAL DISEASE; ANIMAL HUSBANDRY; BLOOD; CLASSIFICATION; DNA SEQUENCE; FECES; FEMALE; GENETICS; GENOTYPE; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; PHYLOGENY; PREVALENCE; SWINE DISEASE; VIROLOGY;

HEPATITIS E VIRUS; SUIDAE;

ANIMAL HUSBANDRY; ANIMALS; FECES; FEMALE; GENOTYPE; HEPATITIS ANTIBODIES; HEPATITIS E; HEPATITIS E VIRUS; MOLECULAR SEQUENCE DATA; PHYLOGENY; PREVALENCE; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SWINE; SWINE DISEASES; THAILAND; VIREMIA;

EID: 62849092317     PISSN: 01466615     EISSN: 10969071     Source Type: Journal    
DOI: 10.1002/jmv.21428     Document Type: Article

References (42)

1. Abe K, Li TC, Ding X, Win KM, Shrestha PK, Quang VX, Ngoc TT, Taltavull TC, Smirnov AV, Uchaikin VF, Luengrojanakul P, Gu H, El-Zayadi AR, Prince AM, Kikuchi K, Masaki N, Inui A, Sata T, Takeda N. 2006. International collaborative survey on epidemiology of hepatitis E virus in 11 countries. Southeast Asian J Trop Med Public Health 37:90-95.
2. Arankalle VA, Paranjape S, Emerson SU, Purcell RH, Walimbe AM. 1999. Phylogenetic analysis of hepatitis E virus isolates from India (1976-1993). J Gen Virol 80:1691-1700.
3. Balayan MS. 1997. Epidemiology of hepatitis E virus infection. J Viral Hepat 4:155-165.
4. Belabbes EH, Bouguermouh A, Benatallah A, Illoul G. 1985. Epidemic non-A, non-B viral hepatitis in Algeria: Strong evidence for its spreading by water. J Med Virol 16:257-263.
5. Blacksell SD, Myint KS, Khounsy S, Phruaravanh M, Mammen MP, Jr., Day NP, Newton PN. 2007. Prevalence of hepatitis E virus antibodies in pigs: Implications for human infections in village-based subsistence pig farming in the Lao PDR. Trans R Soc Trop Med Hyg 101:305-307.
6. Boccia D, Guthmann JP, Klovstad H, Hamid N, Tatay M, Ciglenecki I, Nizou JY, Nicand E, Guerin PJ. 2006. High mortality associated with an outbreak of hepatitis E among displaced persons in Darfur, Sudan. Clin Infect Dis 42:1679-1684.
7. Bouwknegt M, Lodder-Verschoor F, van der Poel WH, Rutjes SA, de Roda Husman AM. 2007. Hepatitis E virus RNA in commercial porcine livers in The Netherlands. J Food Prot 70:2889-2895.
8. Caron M, Enouf V, Than SC, Dellamonica L, Buisson Y, Nicand E. 2006. Identification of genotype 1 hepatitis E virus in samples from swine in Cambodia. J Clin Microbiol 44:3440-3442.
9. Choi IS, Kwon HJ, Shin NR, Yoo HS. 2003. Identification of swine hepatitis E virus (HEV) and prevalence of anti-HEV antibodies in swine and human populations in Korea. J Clin Microbiol 41:3602-3608.
10. Clayson ET, Vaughn DW, Innis BL, Shrestha MP, Pandey R, Malla DB. 1998. Association of hepatitis E virus with an outbreak of hepatitis at a military training camp in Nepal. J Med Virol 54:178-182.
11. Cooper K, Huang FF, Batista L, Rayo CD, Bezanilla JC, Toth TE, Meng XJ. 2005. Identification of genotype 3 hepatitis E virus (HEV) in serum and fecal samples from pigs in Thailand and Mexico, where genotype 1 and 2 HEV strains are prevalent in the respective human populations. J Clin Microbiol 43:1684-1688.
12. Corwin AL, Khiem HB, Clayson ET, Pham KS, Vo TT, Vu TY, Cao TT, Vaughn D, Merven J, Richie TL, Putri MP, He J, Graham R, Wignall FS, Hyams KC. 1996. A waterborne outbreak of hepatitis E virus transmission in southwestern Vietnam. Am J Trop Med Hyg 54:559-562.
13. de Deus N, Seminati C, Pina S, Mateu E, Martin M, Segales J. 2007. Detection of hepatitis E virus in liver, mesenteric lymph node, serum, bile and faeces of naturally infected pigs affected by different pathological conditions. Vet Microbiol 119:105-114.
14. Emerson SU, Purcell RH. 2007. Hepatitis E virus. In: Knipe DM, Howley PM, Griffin DE, Lamp RA, Martin MA, Roizman B, Straus SE, editors. Fields virology, 5th edition. Philadelphia, PA: Lippincott Wiliams & Wilkins. p 3047-3058.
15. Feagins AR, Opriessnig T, Guenette DK, Halbur PG, Meng XJ. 2007. Detection and characterization of infectious Hepatitis E virus from commercial pig livers sold in local grocery stores in the USA. J Gen Virol 88:912-917.
16. Hagiwara K, Iwabu Y, Kanai Y, Miyasho T, Daidoji T, Yunoki M, Tsujikawa M, Ohkkubo Y, Yasue HKI. 2007. Distribution and propagation of hepatitis E virus in experimentally infected swine. Open Vet Sci 1:5-10.
17. Halbur PG, Kasorndorkbua C, Gilbert C, Guenette D, Potters MB, Purcell RH, Emerson SU, Toth TE, Meng XJ. 2001. Comparative pathogenesis of infection of pigs with hepatitis E viruses recovered from a pig and a human. J Clin Microbiol 39:918-923.
18. HlaM, Myint Myint S, Tun K, Thein-Maung M, Khin Maung T. 1985. A clinical and epidemiological study of an epidemic of non-A non-B hepatitis in Rangoon. Am J Trop Med Hyg 34:1183-1189.
19. Huang FF, Haqshenas G, Guenette DK, Halbur PG, Schommer SK, Pierson FW, Toth TE, Meng XJ. 2002. Detection by reverse transcription-PCR and genetic characterization of field isolates of swine hepatitis E virus from pigs in different geographic regions of the United States. J Clin Microbiol 40:1326-1332.
20. Huang YW, Opriessnig T, Halbur PG, Meng XJ. 2007. Initiation at the third in-frame AUG codon of open reading frame 3 of the hepatitis E virus is essential for viral infectivity in vivo. J Virol 81:3018-3026.
21. Inoue J, Takahashi M, Ito K, Shimosegawa T, Okamoto H. 2006. Analysis of human and swine hepatitis E virus (HEV) isolates of genotype 3 in Japan that are only 81-83% similar to reported HEV isolates of the same genotype over the entire genome. J Gen Virol 87:2363-2369.
22. Iqbal M, Ahmed A, Qamar A, Dixon K, Duncan JF, Islam NU, Rauf A, Bryan JP, Malik IA, Legters LJ. 1989. An outbreak of enterically transmitted non-A, non-B hepatitis in Pakistan. Am J Trop Med Hyg 40:438-443.
23. Louisirirotchanakul S, Myint KS, Srimee B, Kanoksinsombat C, Khamboonruang C, Kunstadter P, Wasi C. 2002. The prevalence of viral hepatitis among the Hmong people of northern Thailand. Southeast Asian J Trop Med Public Health 33:837-844.
24. Matsuda H, Okada K, Takahashi K, Mishiro S. 2003. Severe hepatitis E virus infection after ingestion of uncooked liver from a wild boar. J Infect Dis 188:944.
25. Meng XJ. 2000. Novel strains of hepatitis E virus identified from humans and other animal species: Is hepatitis E a zoonosis? J Hepatol 33:842-845.
26. Meng XJ. 2003. Swine hepatitis E virus: Cross-species infection and risk in xenotransplantation. Curr Top Microbiol Immunol 278:185-216.
27. Meng XJ, Purcell RH, Halbur PG, Lehman JR, Webb DM, Tsareva TS, Haynes JS, Thacker BJ, Emerson SU. 1997. A novel virus in swine is closely related to the human hepatitis E virus. Proc Natl Acad Sci USA 94:9860-9865.
28. Meng XJ, Halbur PG, Haynes JS, Tsareva TS, Bruna JD, Royer RL, Purcell RH, Emerson SU. 1998. Experimental infection of pigs with the newly identified swine hepatitis E virus (swine HEV), but not with human strains of HEV. Arch Virol 143:1405-1415.
29. Meng XJ, Dea S, Engle RE, Friendship R, Lyoo YS, Sirinarumitr T, Urairong K, Wang D, Wong D, Yoo D, Zhang Y, Purcell RH, Emerson SU. 1999. Prevalence of antibodies to the hepatitis E virus in pigs from countries where hepatitis E is common or is rare in the human population. J Med Virol 59:297-302.
30. Mizuo H, Suzuki K, Takikawa Y, Sugai Y, Tokita H, Akahane Y, Itoh K, Gotanda Y, Takahashi M, Nishizawa T, Okamoto H. 2002. Polyphyletic strains of hepatitis E virus are responsible for sporadic cases of acute hepatitis in Japan. J Clin Microbiol 40:3209-3218.
31. Okamoto H. 2007. Genetic variability and evolution of hepatitis E virus. Virus Res 127:216-228.
32. Okamoto H, Takahashi M, Nishizawa T, Fukai K, Muramatsu U, Yoshikawa A. 2001. Analysis of the complete genome of indigenous swine hepatitis E virus isolated in Japan. Biochem Biophys Res Commun 289:929-936.
33. Pina S, Buti M, Cotrina M, Piella J, Girones R. 2000. HEV identified in serum from humans with acute hepatitis and in sewage of animal origin in Spain. J Hepatol 33:826-833.
34. Poovorawan Y, Theamboonlers A, Chumdermpadetsuk S, Komolmit P. 1996. Prevalence of hepatitis E virus infection in Thailand. Ann Trop Med Parasitol 90:189-196.
35. Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425.
36. Sedyaningsih-Mamahit ER, Larasati RP, Laras K, Sidemen A, Sukri N, Sabaruddin N, Didi S, Saragih JM, Myint KS, Endy TP, Sulaiman A, Campbell JR, Corwin AL. 2002. First documented outbreak of hepatitis E virus transmission in Java, Indonesia. Trans R Soc Trop Med Hyg 96:398-404.
37. Sreenivasan MA, Arankalle VA, Sehgal A, Pavri KM. 1984. Non-A, non-B epidemic hepatitis: Visualization of virus-like particles in the stool by immune electron microscopy. J Gen Virol 65:1005-1007.
38. Tsega E, Krawczynski K, Hansson BG, Nordenfelt E, Negusse Y, Alemu W, Bahru Y. 1991. Outbreak of acute hepatitis E virus infection among military personnel in northern Ethiopia. J Med Virol 34:232-236.
39. Wang Y, Zhang H, Ling R, Li H, Harrison TJ. 2000. The complete sequence of hepatitis E virus genotype 4 reveals an alternative strategy for translation of open reading frames 2 and 3. J Gen Virol 81:1675-1686.
40. Wang Y, Levine DF, Bendall RP, Teo CG, Harrison TJ. 2001. Partial sequence analysis of indigenous hepatitis E virus isolated in the United Kingdom. J Med Virol 65:706-709.
41. Yamamoto T, Suzuki H, Toyota T, Takahashi M, Okamoto H. 2004. Three male patients with sporadic acute hepatitis E in Sendai, Japan, who were domestically infected with hepatitis E virus of genotype III or IV. J Gastroenterol 39:292-298.
42. Yan Y, Zhang W, Shen Q, Cui L, Hua X. 2008. Prevalence of four different subgenotypes of genotype 4 hepatitis E virus among swine in the Shanghai area of China. Acta Vet Scand 50:12.