-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altchul S.F., Gish W., Miller W., Myers E.W., Lipman D.J. (1990) Basic local alignment search tool. J. Mol. Biol. 215, 403 410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altchul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
9144240550
-
Invertebrate data predict an early emergence of vertebrate fibrillar collagen clades and an anti-incest model
-
Aouacheria A., Cluzel C., Lethias C. et al. (2004) Invertebrate data predict an early emergence of vertebrate fibrillar collagen clades and an anti-incest model. J. Biol. Chem. 279, 47711 47719.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 47711-47719
-
-
Aouacheria, A.1
Cluzel, C.2
Lethias, C.3
-
3
-
-
0034069495
-
Gene Ontology: Tool for the unification of biology
-
Ashburner M., Ball C.A., Blake J.A. et al. (2000) Gene Ontology: tool for the unification of biology. Nat. Genet. 22, 22 29.
-
(2000)
Nat. Genet.
, vol.22
, pp. 22-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
-
4
-
-
33745067419
-
The gain and loss of genes during 600 million years of vertebrate evolution
-
Blomme T., Vandepoele K., de Bodt S., Simillion C., Maere S., Van de Peer Y. (2006) The gain and loss of genes during 600 million years of vertebrate evolution. Genome Biol. 7, R43.
-
(2006)
Genome Biol.
, vol.7
-
-
Blomme, T.1
Vandepoele, K.2
De Bodt, S.3
Simillion, C.4
Maere, S.5
Van De Peer, Y.6
-
5
-
-
0038575444
-
Functional structure and composition of the extracellular matrix
-
Bosman F.T. Stamenkovic I. (2003) Functional structure and composition of the extracellular matrix. Journal of Pathology 200, 423 428.
-
(2003)
Journal of Pathology
, vol.200
, pp. 423-428
-
-
Bosman, F.T.1
Stamenkovic, I.2
-
6
-
-
1642342687
-
Distinct maturations of N-propeptide domains in fibrillar procollagen molecules involved in the formation of heterotypic fibrils in adult sea urchin collagenous tissues
-
Cluzel C., Lethias C., Garrone R., Exposito J.-Y. (2004) Distinct maturations of N-propeptide domains in fibrillar procollagen molecules involved in the formation of heterotypic fibrils in adult sea urchin collagenous tissues. J. Biol. Chem. 279, 9811 9817.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 9811-9817
-
-
Cluzel, C.1
Lethias, C.2
Garrone, R.3
Exposito, J.-Y.4
-
7
-
-
0033358540
-
Human Ehlers-Danlos syndrome type VII C and borine dermatosparaxis are caused by mutations in the procollagen i N- proteinase gene
-
Colige A., Sieron A.L., Li S.W. et al. (1999) Human Ehlers-Danlos syndrome type VII C and borine dermatosparaxis are caused by mutations in the procollagen I N- proteinase gene. Am. J. Hum. Genet. 65, 308 317.
-
(1999)
Am. J. Hum. Genet.
, vol.65
, pp. 308-317
-
-
Colige, A.1
Sieron, A.L.2
Li, S.W.3
-
8
-
-
26444603772
-
Two rounds of whole genome duplication in the ancestral vertebrate
-
Dehal P. Boore J.L. (2005) Two rounds of whole genome duplication in the ancestral vertebrate. PLoS Biol. 3, 1700 1708.
-
(2005)
PLoS Biol.
, vol.3
, pp. 1700-1708
-
-
Dehal, P.1
Boore, J.L.2
-
9
-
-
2242464840
-
The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins
-
Dehal P., Satou Y., Campbell R.K. et al. (2002) The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science 298, 2157 2167.
-
(2002)
Science
, vol.298
, pp. 2157-2167
-
-
Dehal, P.1
Satou, Y.2
Campbell, R.K.3
-
10
-
-
21744445916
-
The integrins of the urochordate Ciona intestinalis provide novel insights into the molecular evolution of the vertebrate integrin family
-
Ewan R., Huxley-Jones J., Mould A.P., Humphries M.J., Robertson D.L., Boot-Handford R.P. (2005) The integrins of the urochordate Ciona intestinalis provide novel insights into the molecular evolution of the vertebrate integrin family. BMC Evol. Biol. 5, 31.
-
(2005)
BMC Evol. Biol.
, vol.5
, pp. 31
-
-
Ewan, R.1
Huxley-Jones, J.2
Mould, A.P.3
Humphries, M.J.4
Robertson, D.L.5
Boot-Handford, R.P.6
-
11
-
-
0026636614
-
Sea urchin collagen evolution homologous to vertebrate pro-a2(I) collagen
-
Exposito J.-Y., D'Allesio M., Solursh M., Ramirez F. (1992) Sea urchin collagen evolution homologous to vertebrate pro-a2(I) collagen. J. Biol. Chem. 267, 15559 15562.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 15559-15562
-
-
Exposito, J.-Y.1
D'Allesio, M.2
Solursh, M.3
Ramirez, F.4
-
12
-
-
0003437299
-
-
Washington: Department of Genome Sciences, University of Washington.
-
Felsenstein J. (2005) PHYLIP (Phylogeny Inference Package). Washington : Department of Genome Sciences, University of Washington.
-
(2005)
PHYLIP (Phylogeny Inference Package).
-
-
Felsenstein, J.1
-
13
-
-
0033365396
-
Digenic junctional epidermolysis bullosa: Mutations in COL17A1 and LAMB3 genes
-
Floeth M. Bruckner-Tuderman L. (1999) Digenic junctional epidermolysis bullosa: mutations in COL17A1 and LAMB3 genes. Am. J. Hum. Genet. 65, 1530 1537.
-
(1999)
Am. J. Hum. Genet.
, vol.65
, pp. 1530-1537
-
-
Floeth, M.1
Bruckner-Tuderman, L.2
-
14
-
-
0242710145
-
Collagens: Structure, function and biosynthesis
-
Gelse K., Poschl E., Aigner T. (2003) Collagens: structure, function and biosynthesis. Adv. Drug Deliv. Rev. 55, 1531 1546.
-
(2003)
Adv. Drug Deliv. Rev.
, vol.55
, pp. 1531-1546
-
-
Gelse, K.1
Poschl, E.2
Aigner, T.3
-
15
-
-
4143135282
-
Apoptosis regulation in the mammary gland
-
Green K.A. Streuli C.H. (2004) Apoptosis regulation in the mammary gland. Cell. Mol. Life Sci. 61, 1867 1883.
-
(2004)
Cell. Mol. Life Sci.
, vol.61
, pp. 1867-1883
-
-
Green, K.A.1
Streuli, C.H.2
-
16
-
-
33645672459
-
Losartan, an AT1 agonist, prevents aortic aneurysm in a mouse model of Marfan syndrome
-
Habashi J.P., Judge D.P., Holm T.M. et al. (2006) Losartan, an AT1 agonist, prevents aortic aneurysm in a mouse model of Marfan syndrome. Science 312, 117 121.
-
(2006)
Science
, vol.312
, pp. 117-121
-
-
Habashi, J.P.1
Judge, D.P.2
Holm, T.M.3
-
17
-
-
38049133600
-
All duplicates are not equal: The difference between small-scale and genome duplication
-
Hakes L., Pinney J.W., Lovell S.C., Oliver S.G., Robertson D.L. (2007) All duplicates are not equal: the difference between small-scale and genome duplication. Genome Biol. 8, R209.
-
(2007)
Genome Biol.
, vol.8
-
-
Hakes, L.1
Pinney, J.W.2
Lovell, S.C.3
Oliver, S.G.4
Robertson, D.L.5
-
18
-
-
15544389841
-
Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution
-
He X. Zhang J. (2005) Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution. Genetics 169, 1157 1164.
-
(2005)
Genetics
, vol.169
, pp. 1157-1164
-
-
He, X.1
Zhang, J.2
-
19
-
-
0035010738
-
Ancient genome duplications did not structure the human Hox-bearing chromosomes
-
Hughes A.L., Dasilva J., Friedman R. (2001) Ancient genome duplications did not structure the human Hox-bearing chromosomes. Genome Res. 11, 771 790.
-
(2001)
Genome Res.
, vol.11
, pp. 771-790
-
-
Hughes, A.L.1
Dasilva, J.2
Friedman, R.3
-
20
-
-
0034635465
-
Conservation and novelty in the evolution of cell adhesion and extracellular matrix genes
-
Hutter H., Vogel B.E., Plenefish J.D. et al. (2000) Conservation and novelty in the evolution of cell adhesion and extracellular matrix genes. Science 287, 989 994.
-
(2000)
Science
, vol.287
, pp. 989-994
-
-
Hutter, H.1
Vogel, B.E.2
Plenefish, J.D.3
-
21
-
-
21844444108
-
The characterisation of six ADAMTS proteases in the basal chordate Ciona intestinalis provides new insights into the vertebrate ADAMTS family
-
Huxley-Jones J., Apte S.S., Robertson D.L., Boot-Handford R.P. (2005) The characterisation of six ADAMTS proteases in the basal chordate Ciona intestinalis provides new insights into the vertebrate ADAMTS family. Int. J. Biochem. Cell Biol. 27, 1838 1845.
-
(2005)
Int. J. Biochem. Cell Biol.
, vol.27
, pp. 1838-1845
-
-
Huxley-Jones, J.1
Apte, S.S.2
Robertson, D.L.3
Boot-Handford, R.P.4
-
22
-
-
34248549971
-
The evolution of the vertebrate metzincins, insights from Ciona intestinalis and Danio rerio
-
Huxley-Jones J., Clarke T.K., Beck C., Toubaris G., Robertson D.L., Boot-Handford R.P. (2007a) The evolution of the vertebrate metzincins, insights from Ciona intestinalis and Danio rerio. BMC Evol. Biol. 7, 63.
-
(2007)
BMC Evol. Biol.
, vol.7
, pp. 63
-
-
Huxley-Jones, J.1
Clarke, T.K.2
Beck, C.3
Toubaris, G.4
Robertson, D.L.5
Boot-Handford, R.P.6
-
24
-
-
0034710157
-
The evolution of cell adhesion
-
Hynes R.O. Zhao Q. (2000) The evolution of cell adhesion. J. Cell Biol. 150, 89 95.
-
(2000)
J. Cell Biol.
, vol.150
, pp. 89-95
-
-
Hynes, R.O.1
Zhao, Q.2
-
25
-
-
7244245762
-
Finishing the euchromatic sequence of the human genome
-
International Human Genome Sequencing Consortium
-
International Human Genome Sequencing Consortium (2004) Finishing the euchromatic sequence of the human genome. Nature 431, 931 945.
-
(2004)
Nature
, vol.431
, pp. 931-945
-
-
-
26
-
-
0030735788
-
Molecular basis of dystrophic epidermolysis bullosa: Mutations in the type VII collagen gene (COL7A1)
-
Jarvikallio A., Pulkkinen L., Uitto J. (1997) Molecular basis of dystrophic epidermolysis bullosa: mutations in the type VII collagen gene (COL7A1). Hum. Mutat. 10, 338 347.
-
(1997)
Hum. Mutat.
, vol.10
, pp. 338-347
-
-
Jarvikallio, A.1
Pulkkinen, L.2
Uitto, J.3
-
27
-
-
0037144516
-
A syndrome of joint laxity and impaired tendon integrity in lumican- and fibromodulin-deficient mice
-
Jepsen K.J., Wu F., Peragallo J.H. et al. (2002) A syndrome of joint laxity and impaired tendon integrity in lumican- and fibromodulin-deficient mice. J. Biol. Chem. 277, 35532 35540.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 35532-35540
-
-
Jepsen, K.J.1
Wu, F.2
Peragallo, J.H.3
-
28
-
-
0030955414
-
Mutations in fibrillar collagens (types I, II, III and XI), fibril-associated collagen (type IX) and network-forming collagen (tyep X) cause a spectrum of diseases in bone, cartilage and blood vessels
-
Kuivaniemi H., Tromp G., Prockop D.J. (1997) Mutations in fibrillar collagens (types I, II, III and XI), fibril-associated collagen (type IX) and network-forming collagen (tyep X) cause a spectrum of diseases in bone, cartilage and blood vessels. Hum. Mutat. 9, 300 315.
-
(1997)
Hum. Mutat.
, vol.9
, pp. 300-315
-
-
Kuivaniemi, H.1
Tromp, G.2
Prockop, D.J.3
-
29
-
-
0347418197
-
Collagens, modifying enzymes and their mutations in humans, flies and worms
-
Myllyharju J. Kivirikko K.I. (2004) Collagens, modifying enzymes and their mutations in humans, flies and worms. Trends Genet. 20, 33 43.
-
(2004)
Trends Genet.
, vol.20
, pp. 33-43
-
-
Myllyharju, J.1
Kivirikko, K.I.2
-
30
-
-
0036461064
-
Laminin 5 mutations in junctional epidermolysis bullosa: Molecular basis of Herlitz and non-Herlitz phenotypes
-
Nakano A., Chao S.C., Pulkkinen L. et al. (2001) Laminin 5 mutations in junctional epidermolysis bullosa: molecular basis of Herlitz and non-Herlitz phenotypes. Hum. Genet. 110, 41 51.
-
(2001)
Hum. Genet.
, vol.110
, pp. 41-51
-
-
Nakano, A.1
Chao, S.C.2
Pulkkinen, L.3
-
32
-
-
24644486449
-
Timing and mechanism of ancient vertebrate genome duplications - The adventure of a hypothesis
-
Panopoulou G. Poustka A.J. (2005) Timing and mechanism of ancient vertebrate genome duplications - the adventure of a hypothesis. Trends Genet. 21, 559 567.
-
(2005)
Trends Genet.
, vol.21
, pp. 559-567
-
-
Panopoulou, G.1
Poustka, A.J.2
-
33
-
-
0034708444
-
Comparative genomics of the eukaryotes
-
Rubin G.M., Yandell M.D., Wortman J.R. et al. (2000) Comparative genomics of the eukaryotes. Science 287, 2204 2215.
-
(2000)
Science
, vol.287
, pp. 2204-2215
-
-
Rubin, G.M.1
Yandell, M.D.2
Wortman, J.R.3
-
34
-
-
0030912738
-
A homozygous mutation in the integrin alpha-6 gene in junctional epidermolysis bullosa with pyloric atresia
-
Ruzzi L., Gagnoux-Palacois L., Pinola M. et al. (1997) A homozygous mutation in the integrin alpha-6 gene in junctional epidermolysis bullosa with pyloric atresia. J. Clin. Invest. 99, 2826 2831.
-
(1997)
J. Clin. Invest.
, vol.99
, pp. 2826-2831
-
-
Ruzzi, L.1
Gagnoux-Palacois, L.2
Pinola, M.3
-
35
-
-
33750995860
-
The genome of the sea urchin Strongylocentrotus purpuratus
-
Sea Urchin Genome Sequencing Consortium
-
Sea Urchin Genome Sequencing Consortium (2006) The genome of the sea urchin Strongylocentrotus purpuratus. Science 314, 941 952.
-
(2006)
Science
, vol.314
, pp. 941-952
-
-
-
37
-
-
27344435774
-
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
-
Subramanian A., Tamayo P., Mootha V.K. et al. (2005) Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl. Acad. Sci. U.S.A. 102, 15545 15550.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
-
38
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalities and weight matrix choice
-
Thompson J.D., Higgins D.G., Gibron T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalities and weight matrix choice. Nucleic Acids Res. 22, 4673 4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibron, T.J.3
-
39
-
-
33751550350
-
The echinoderm adhesome
-
Whittaker C.A., Beregon K.F., Whittle J., Brandhorst B.P., Burke R.D., Hynes R.O. (2006) The echinoderm adhesome. Dev. Biol. 300, 252 266.
-
(2006)
Dev. Biol.
, vol.300
, pp. 252-266
-
-
Whittaker, C.A.1
Beregon, K.F.2
Whittle, J.3
Brandhorst, B.P.4
Burke, R.D.5
Hynes, R.O.6
-
40
-
-
0033812976
-
Mutations in the lysyl hydroxilase 1 gene that result in enzyme deficiency and the clinical phenotype of Ehlers-Danlos syndrome type VI
-
Yeowell H.N. Walker L.C. (2000) Mutations in the lysyl hydroxilase 1 gene that result in enzyme deficiency and the clinical phenotype of Ehlers-Danlos syndrome type VI. Mol. Genet. Metab. 71, 212 224.
-
(2000)
Mol. Genet. Metab.
, vol.71
, pp. 212-224
-
-
Yeowell, H.N.1
Walker, L.C.2
-
41
-
-
33644751775
-
Emilin 1 links TGF-beta maturation to blood pressure homeostasis
-
Zacchigna L., Vecchione C., Notte A. et al. (2006) Emilin 1 links TGF-beta maturation to blood pressure homeostasis. Cell 124, 929 942.
-
(2006)
Cell
, vol.124
, pp. 929-942
-
-
Zacchigna, L.1
Vecchione, C.2
Notte, A.3
-
42
-
-
0038051439
-
Haploinsufficiency of TNXB is associated with hypermobility type of Ehlers-Danlos syndrome
-
Zweers M.C., Bristow J., Steijlen P.M. et al. (2003) Haploinsufficiency of TNXB is associated with hypermobility type of Ehlers-Danlos syndrome. Am. J. Hum. Genet. 73, 214 217.
-
(2003)
Am. J. Hum. Genet.
, vol.73
, pp. 214-217
-
-
Zweers, M.C.1
Bristow, J.2
Steijlen, P.M.3
|