Diffusion-influenced reactions involving a reactant with two active sites

Journal of Chemical Physics

Volumn 130, Issue 9, 2009, Pages

  Kang, Aeri ^a   Kim, Ji Hyun ^a   Lee, Sangyoub ^a   Park, Hwangseo ^b  

^a Seoul National University   (South Korea)

^b Sejong University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

BROWNIAN MOVEMENT;

ACTIVE SITES; ANALYTIC EXPRESSIONS; ANGULAR DISTANCES; BROWNIAN DYNAMICS; DECOUPLING APPROXIMATIONS; DIFFUSION-INFLUENCED REACTIONS; INTERFERENCE EFFECTS; MULTI VARIABLES; RATE COEFFICIENTS; RATE EXPRESSIONS; REACTANT SPECIES; TIME-DEPENDENT RATE COEFFICIENTS;

SURFACE DIFFUSION;

ARTICLE; CHEMICAL MODEL; CHEMICAL REACTION; DIFFUSION; ENZYME ACTIVE SITE; KINETICS;

CATALYTIC DOMAIN; CHEMICAL PROCESSES; DIFFUSION; KINETICS; MODELS, CHEMICAL;

EID: 62249116452     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.3082010     Document Type: Article

References (28)

1. O. G. Berg and P. H. von Hippel, Annu. Rev. Biophys. Biophys. Chem. ARBCEY 0883-9182 10.1146/annurev.bb.14.060185.001023 14, 131 (1985).
2. C. R. Cantor and P. R. Schimmel, Biophysical Chemistry (Freeman, San Francisco, 1980), Pt. III.
3. F. Piazza, P. De Los Rios, D. Fanelli, L. Bongini, and U. Skoglund, Eur. Biophys. J. EBJOE8 0175-7571 10.1007/s00249-005-0460-5 34, 899 (2005).
4. J. A. McCammon and S. C. Harvey, Dynamics of Proteins and Nucleic Acids (Cambridge University Press, Cambridge, 1987).
5. K. Solc and W. H. Stockmayer, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1675283 54, 2981 (1971).
6. D. Shoup, G. Lipari, and A. Szabo, Biophys. J. 36, 697 (1981). 0006-3495
7. S. Lee and M. Karplus, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.452757 86, 1904 (1987).
8. A. I. Shushin, Chem. Phys. Lett. CHPLBC 0009-2614 10.1016/0009-2614(86) 80504-8 130, 452 (1986); A. I. Shushin, Chem. Phys. CMPHC2 0301-0104 10.1016/0301-0104(88)87212-4 120, 91 (1988).
9. A. V. Barzykin and A. I. Shushin, Biophys. J. 80, 2062 (2001). 0006-3495
10. S. A. Allison and J. A. McCammon, J. Phys. Chem. JPCHAX 0022-3654 10.1021/j100253a006 89, 1072 (1985).
11. R. Zwanzig and A. Szabo, Biophys. J. 60, 671 (1991). 0006-3495
12. S. H. Northrup, J. Phys. Chem. JPCHAX 0022-3654 10.1021/j100331a060 92, 5847 (1988).
13. A. M. Berezhkovskii, Y. A. Makhnovskii, M. I. Monine, V. Y. Zitserman, and S. Y. Shvartsman, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1814351 121, 11390 (2004).
14. I. A. Pritchin and K. M. Salikhov, J. Phys. Chem. JPCHAX 0022-3654 10.1021/j100270a019 89, 5212 (1985).
15. S. D. Traytak and A. V. Barzykin, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.2804328 127, 215103 (2007).
16. J. Uhm, J. Lee, C. Eun, and S. Lee, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.2232226 125, 054911 (2006).
17. K. L. Ivanov and N. N. Lukzen, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.2898091 128, 155105 (2008).
18. S. Lee and M. Karplus, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.452140 86, 1883 (1987).
19. G. A. Baker, Jr. and P. Graves-Morris, Pad́ Approximants, 2nd ed. (Cambridge University Press, Cambridge, 1966).
20. Z. X. Wang and D. R. Guo, Special Functions (World Scientific, Singapore, 1989).
21. O. G. Berg, Biophys. J. 47, 1 (1985). 0006-3495
22. S. H. Northrup, S. A. Allison, and J. A. McCammon, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.446900 80, 1517 (1984).
23. S. A. Allison, S. H. Northrup, and J. A. McCammon, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.449242 83, 2894 (1985).
24. S. H. Northrup, M. S. Curvin, S. A. Allison, and J. A. McCammon, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.450381 84, 2196 (1986).
25. S. Yang, J. Kim, and S. Lee, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.480363 111, 10119 (1999).
26. J. Lee, S. Yang, J. Kim, and S. Lee, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1687680 120, 7564 (2004).
27. G. Lamm and K. Schulten, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.445002 78, 2713 (1983).
28. G. Lamm, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.447033 80, 2845 (1984).