On the relationships of mosses of the order hypnales, with special reference to taxa traditionally classified in the leskeaceae

Pleurocarpous Mosses: Systematics and Evolution

Volumn , Issue , 2007, Pages 177-214

  Ignatov, Michael S ^a   Gardiner, Anastasia A ^b   Bobrova, Vera K ^b   Milyutina, Irina A ^b   Huttunen, Sanna ^c   Troitsky, Alexey V ^b  

^a RUSSIAN ACADEMY OF SCIENCES   (Russian Federation)

^b MOSCOW STATE UNIVERSITY   (Russian Federation)

^c UNIVERSITY OF HELSINKI   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 61849103327     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1201/9781420005592     Document Type: Chapter

References (52)

1. Ando, H. (1976) Studies on the genus Hypnum Hedw. (II). Journal of Science of Hiroshima University, Ser. B, Div. 2, Botany, 14: 165-207.
2. Arikawa, T. (2004) A taxonomic study of the genus Pylaisia (Hypnaceae, Musci). Journal of the Hattori Botanical Laboratory, 95: 71-154.
3. Brotherus, V. F. (1908) Musci, in Die natürlichen Pflanzenfamilien,. Vol. 1(3) (ed. A. Engler and K. Prantl). Verlag von W. Engelmann, Leipzig, pp. 1009-1152.
4. Brotherus, V. F. (1925) Musci, in Die natürlichen Pflanzenfamilien,. Vol. 11, Ed. 2 (ed. A. Engler). Verlag von W. Engelmann, Leipzig, pp. 1-522.
5. Buck, W. R. (1998) Pleurocarpous mosses of the West Indies. Memoirs of the New York Botanical Garden, 82: 1-400.
6. Buck, W. R. and Crum, H. (1978) A re-interpretation of the Fabroniaceae with notes on selected genera. Journal of the Hattori Botanical Laboratory, 44: 347-369.
7. Buck, W. R. and Crum, H. (1990) An evaluation of familial limits among the genera traditionally aligned with the Thuidiaceae and Leskeaceae. Contributions from the University of Michigan Herbarium, 17: 55-69.
8. Buck, W. R. and Goffinet, B. (2000) Morphology and classification of mosses. In Bryophyte Biology (ed. Shaw, A. J. and Goffinet, B.). University of Cambridge Press, Cambridge, pp. 71-123.
9. Buck, W. R. and Vitt, D. H. (1986) Suggestions for a new familial classification of pleurocarpous mosses. Taxon, 35: 21-60.
10. Buck, W. R., Goffinet, B. and Shaw, A. J. (2000) Testing morphological concepts of orders of pleurocarpous mosses (Bryophyta) using phylogenetic reconstructions based on trnL-trnF and rps4 sequences. Molecular Phylogenetics and Evolution, 16: 180-198.
11. Budyakova, A. A., Ignatov, M. S., Yatsentyuk, S. P. and Troitsky, A. V. (2003 [2004]). Systematic position of Habrodon (Habrodontaceae, Musci) as inferred from nuclear ITS1 and ITS2 and chloroplast trnL intron and trnL-trnF spacer sequence data. Arctoa, 12: 137-150.
12. Cech, T. R., Damberger, S. H. and Gutell, R. R. (1994) Representation of the secondary and tertiary structure of group I introns. Structural Biology, 1: 273-280.
13. Crosby, M. R., Magill, R. E., Allen, B. and He, S. (1999) A Checklist of the Mosses. Missouri Botanical Garden, St. Louis.
14. Crum, H. and Anderson, L. E. (1981) Mosses of Eastern North America. Vols. 1, 2. Columbia University Press, New York.
15. Fleischer, M. (1923) Die Musci der Flora von Buitenzorg, Band 4. E. J. Brill, Leiden, pp. 1105-1729.
16. Gardiner, A., Ignatov, M., Huttunen, S. and Troitsky, A. (2005) On resurrection of the families Pseudoleskeaceae Schimp. and Pylaisiaceae Schimp. (Musci, Hypnales). Taxon, 54: 651-663.
17. Gladstein, D. and Wheeler, W. (2001) POY documentation and command summary. Available at ftp://ftp.amnh.org/pub/molecular/poy.
18. Goffinet, B. and Buck, W. R. (2004) Systematics of the Bryophyta (mosses): From molecules to a revised classification. In Molecular Systematics of Bryophytes (ed. B. Goffinet, V. Hollowell and R. Magill). Missouri Botanical Garden Press, St. Louis, pp. 205-239.
19. Goffinet, B., Cox, C. J., Shaw, A. J. and Hedderson, T. J. (2001) The Bryophyta (mosses): Systematic and evolutionary inferences from an rps4 gene (cpDNA) phylogeny. Annals of Botany, 87: 191-208.
20. Goloboff, P. A. (1994) NONA: A Tree Searching Program. Program and documentation, published by the author, Tucumán, Argentina.
21. Hall, T. A. (1999) BioEdit: A user-friendly biological sequence alignment editor analysis program for Windows 95/98/NT. Nucleic Acids Symposium, Ser. 41: 95-98.
22. He, S. (2005) A revision of the genus Leptopterigynandrum (Bryopsida, Leskeaceae). Journal of the Hattori Botanical Laboratory, 97: 1-38.
23. Hedenäs, L. (1989) Some neglected character distribution patterns among the pleurocarpous mosses. Bryologist, 92: 157-163.
24. Hedenäs, L. (1997a [1998]) An evaluation of phylogenetic relationships among the Thuidiaceae, the Amblystegiaceae, and the temperate members of the Hypnaceae. Lindbergia, 22: 101-113.
25. Hedenäs, L. (1997b) A partial generic revision of Campylium (Musci). Bryologist, 100: 65-88.
26. Hedenäs, L. (1999) New views of the relationships among European pleurocarpous mosses. Stuttgarter Beiträge zur Naturkunde, Serie A (Biologie), 589: 1-15.
27. Hedenäs, L. (2004) Morphological and anatomical evidence suggest that “Hylocomiaceae” taxa belong to at least two clades. Journal of Bryology, 26: 125-135.
28. Huelsenbeck, J. P. and Ronquist, F. (2001) MRBAYES: Bayesian inference of phylogeny. Bioinformatics, 17:754-755.
29. Huttunen, S. and Ignatov, M. S. (2004) Phylogeny of Brachytheciaceae (Bryophyta), based on morphology and sequence level data. Cladistics, 20: 151-183.
30. Huttunen, S., Ignatov, M. S., Müller, K. and Quandt, D. (2004) Phylogeny and evolution of epiphytism in the three moss families: Meteoriaceae, Brachytheciaceae, and Lembophyllaceae. In Molecular Systematics of Bryophytes (ed. B. Goffinet, V. Hollowell and R. Magill). Missouri Botanical Garden Press, St. Louis, pp. 328-361.
31. Ignatov, M. S. and Huttunen, S. (2002 [2003]) Brachytheciaceae (Bryophyta) - a family of sibling genera. Arctoa, 11: 245-296.
32. Ignatov, M. S. and Ignatova, E. A. (2004) Moss Flora of the Middle European Russia. Vol. 2. KMK, Moscow (in Russian).
33. Ireland, R. R. (1968) Pleuroziopsidaceae, a new family of mosses. Journal of the Hattori Botanical Laboratory, 31: 59-64.
34. Ireland, R. R. and Buck, W. R. (1994) Stereophyllaceae. Flora Neotropica, 65: 1-50.
35. Mathews, D. H., Sabina, J., Zuker, M. and Turner, D.H. (1999) Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. Journal of Molecular Biology, 288: 911-940.
36. Nixon, K. C. (1999a). Winclada (BETA) ver. 0.9.9. available at http://www.cladistics.com/about_winc.html.
37. Nixon, K. C. (1999b) The parsimony ratchet, a new method for rapid parsimony analysis. Cladistics, 15:407-414.
38. Noguchi, A. (1972) Musci Japonici. IX. The Leskeaceae. Journal of the Hattori Botanical Laboratory, 36:499-529.
39. Noguchi, A. (1991) Illustrated Moss Flora of Japan, Part 4. Hattori Botanical Laboratory, Nichinan.
40. Norris, D. H. and Ignatov, M. S. (2000) Observations on stem surface anatomy in Climacium and Pleuroziopsis (Climaciaceae, Musci). Arctoa, 9: 151-154.
41. Pedersen, N. and Hedenäs, L. (2002) Phylogeny of the Plagiotheciaceae based on molecular and morphological evidences. Bryologist, 105: 310-324.
42. Shaw, A. J., Cox, C. J., Goffinet, B., Buck, W. R. and Boles, S. B. (2003) Phylogenetic evidence of a rapid radiation of pleurocarpous mosses (Bryophyta). Evolution, 57: 2226-2241.
43. Smith, A. J. E. (1978) The Moss Flora of Britain and Ireland. University of Cambridge Press, Cambridge.
44. Stark, L. R. (1987) A taxonomic monograph of Forsstroemia Lindb. (Bryopsida: Leptodontaceae). Journal of the Hattori Botanical Laboratory, 63: 133-218.
45. Stech, M. and Frahm, J.-P. (2001) The systematic position of Ochyraea tatrensis (Hypnobartlettiaceae, Bryopsida) based on molecular data. Bryologist, 104: 199-203.
46. Tsubota, H., Arikawa, T., Akiyama, H., De Luna, E., Gonzales, D., Higuchi, M. and Deguchi, H. (2002) Molecular phylogeny of hypnobryalean mosses as inferred from a large scale dataset of chloroplast rbcL, with special reference to the Hypnaceae and possibly related families. Hikobia, 13: 645-665.
47. Tsubota, H., De Luna, E., Gonzales, D., Ignatov, M. and Deguchi, H. (2004) Molecular phylogenetics and ordinal relationships based on analyses of a large-scale data set of 600 rbcL sequences of mosses. Hikobia, 14: 149-170.
48. Tuomikoski, R. and Koponen, T. (1979) On the generic taxonomy of Calliergon and Drepanocladus (Musci, Amblystegiaceae). Annales Botanici Fennici, 16: 213-227.
49. Vanderpoorten, A., Hedenäs, L., Cox, C. J. and Shaw, A. J. (2002a) Circumscription, classification, and taxonomy of the Amblystegiaceae (Bryopsida) inferred from nuclear and chloroplast DNA sequence data and morphology. Taxon, 51: 115-122.
50. Vanderpoorten, A., Hedenäs, L., Cox, C. J. and Shaw, A. J. (2002b) Phylogeny and morphological evolution of the Amblystegiaceae (Bryopsida). Molecular Phylogenetics and Evolution, 23: 1-21.
51. Wheeler, W. (1996) Optimization alignment: The end of multiple sequence alignment in phylogenetics? Cladistics, 12: 1-9.
52. Zuker, M. (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Research 31: 34063415. www.bioinfo.rpi.edu/~zukerm/rna/node3.html.