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Volumn 4, Issue 3, 2009, Pages

Structural basis and catalytic mechanism for the dual functional Endo-β-N-acetylglucosaminidase A

Author keywords

[No Author keywords available]

Indexed keywords

GLYCOSIDASE; N ACETYL BETA GLUCOSAMINIDASE; N ACETYL BETA GLUCOSAMINIDASE A; N ACETYLGLUCOSAMINE; OXAZOLINE DERIVATIVE; UNCLASSIFIED DRUG;

EID: 61849085824     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0004658     Document Type: Article
Times cited : (54)

References (38)
  • 1
    • 0032562703 scopus 로고    scopus 로고
    • Complex, two-way traffic of molecules across the membrane of the endoplasmic reticulum
    • Suzuki T, Yan Q, Lennarz WJ (1998) Complex, two-way traffic of molecules across the membrane of the endoplasmic reticulum. J Biol Chem 273: 10083-10086.
    • (1998) J Biol Chem , vol.273 , pp. 10083-10086
    • Suzuki, T.1    Yan, Q.2    Lennarz, W.J.3
  • 2
    • 0024377581 scopus 로고
    • Induction and purification of endo-beta -N-acetylglucosaminidase from Arthrobacter protophormiae grown in ovalbumin
    • Takegawa K, Nakoshi M, Iwahara S, Yamamoto K, Tochikura T (1989) Induction and purification of endo-beta -N-acetylglucosaminidase from Arthrobacter protophormiae grown in ovalbumin. Appl Environ Microbiol 55: 3107-3112.
    • (1989) Appl Environ Microbiol , vol.55 , pp. 3107-3112
    • Takegawa, K.1    Nakoshi, M.2    Iwahara, S.3    Yamamoto, K.4    Tochikura, T.5
  • 3
    • 0028171279 scopus 로고
    • Purification and characterization of an endo-N-acetyl-beta -D-glucosaminidase from the culture medium of Stigmatella aurantiaca DW4
    • Bourgerie S, Karamanos Y, Grard T, Julien R (1994) Purification and characterization of an endo-N-acetyl-beta -D-glucosaminidase from the culture medium of Stigmatella aurantiaca DW4. J Bacteriol 176: 6170-6174.
    • (1994) J Bacteriol , vol.176 , pp. 6170-6174
    • Bourgerie, S.1    Karamanos, Y.2    Grard, T.3    Julien, R.4
  • 4
    • 4544289558 scopus 로고    scopus 로고
    • Characterization of endo-beta -N-acetylglucosaminidase from alkaliphilic Bacillus halodurans C-125
    • Fujita K, Takami H, Yamamoto K, Takegawa K (2004) Characterization of endo-beta -N-acetylglucosaminidase from alkaliphilic Bacillus halodurans C-125. Biosci, Biotechnol, Biochem 68: 1059-1066.
    • (2004) Biosci, Biotechnol, Biochem , vol.68 , pp. 1059-1066
    • Fujita, K.1    Takami, H.2    Yamamoto, K.3    Takegawa, K.4
  • 5
    • 85008727700 scopus 로고
    • A novel endo-beta -N-acetylglucosaminidase acting on complex oligosaccharides of glycoproteins in a fungus
    • Kadowaki S, Yamamoto K, Fujisaki M, Kumagai H, Tochikura T (1988) A novel endo-beta -N-acetylglucosaminidase acting on complex oligosaccharides of glycoproteins in a fungus. Agric Biol Chem 52: 2387-2389.
    • (1988) Agric Biol Chem , vol.52 , pp. 2387-2389
    • Kadowaki, S.1    Yamamoto, K.2    Fujisaki, M.3    Kumagai, H.4    Tochikura, T.5
  • 6
    • 85004262718 scopus 로고
    • Purification and characterization of a novel fungal endo-beta -N-acetylglucosa-minidase acting on complex oligosaccharides of glycoproteins
    • Kadowaki S, Yamamoto K, Fujisaki M, Izumi K, Tochikura T, et al. (1990) Purification and characterization of a novel fungal endo-beta -N-acetylglucosa-minidase acting on complex oligosaccharides of glycoproteins. Agric Biol Chem 54: 97-106.
    • (1990) Agric Biol Chem , vol.54 , pp. 97-106
    • Kadowaki, S.1    Yamamoto, K.2    Fujisaki, M.3    Izumi, K.4    Tochikura, T.5
  • 7
    • 0019879299 scopus 로고
    • Isolation of two endo-beta-N-acetylglucosaminidases from fig latex
    • Li SC, Asakawa M, Hirabayashi Y, Li Y (1981) Isolation of two endo-beta-N-acetylglucosaminidases from fig latex. Biochim Biophys Acta 660: 278-283.
    • (1981) Biochim Biophys Acta , vol.660 , pp. 278-283
    • Li, S.C.1    Asakawa, M.2    Hirabayashi, Y.3    Li, Y.4
  • 8
    • 0037084982 scopus 로고    scopus 로고
    • Subcellular localization of endo-beta-N-acetylglucosaminidase and high-mannose type free N-glycans in plant cell
    • Kimura Y, Matsuo S, Tsurusaki S, Kimura M, Hara-Nishimura I, et al. (2002) Subcellular localization of endo-beta-N-acetylglucosaminidase and high-mannose type free N-glycans in plant cell. Biochim Biophys Acta 1570: 38-46.
    • (2002) Biochim Biophys Acta , vol.1570 , pp. 38-46
    • Kimura, Y.1    Matsuo, S.2    Tsurusaki, S.3    Kimura, M.4    Hara-Nishimura, I.5
  • 9
    • 0027275781 scopus 로고
    • Human salivary endo-beta -N-acetylglucosaminidase HS specific for complex type sugar chains of glycoproteins
    • Ito K, Okada Y, Ishida K, Minamiura N (1993) Human salivary endo-beta -N-acetylglucosaminidase HS specific for complex type sugar chains of glycoproteins. J Biol Chem 268: 16074-16081.
    • (1993) J Biol Chem , vol.268 , pp. 16074-16081
    • Ito, K.1    Okada, Y.2    Ishida, K.3    Minamiura, N.4
  • 10
    • 0037162548 scopus 로고    scopus 로고
    • Endo-beta-N-acetylglucosaminidase, an enzyme involved in processing of free oligosaccharides in the cytosol
    • Suzuki T, Yano K, Sugimoto S, Kitajima K, Lennarz WJ, et al. (2002) Endo-beta-N-acetylglucosaminidase, an enzyme involved in processing of free oligosaccharides in the cytosol. Proc Natl Acad Sci U S A 99: 9691-9696.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 9691-9696
    • Suzuki, T.1    Yano, K.2    Sugimoto, S.3    Kitajima, K.4    Lennarz, W.J.5
  • 11
    • 0029056255 scopus 로고
    • Enhanced transglycosylation activity of Arthrobacter protophormiae endo-beta -N-acetylglucosaminidase in media containing organic solvents
    • Fan J-Q, Takegawa K, Iwahara S, Kondo A, Kato I, et al. (1995) Enhanced transglycosylation activity of Arthrobacter protophormiae endo-beta -N-acetylglucosaminidase in media containing organic solvents. J Biol Chem 270: 17723-17729.
    • (1995) J Biol Chem , vol.270 , pp. 17723-17729
    • Fan, J.-Q.1    Takegawa, K.2    Iwahara, S.3    Kondo, A.4    Kato, I.5
  • 12
    • 85007998573 scopus 로고
    • Novel specificities of Mucor hiemalis endo-beta -N-acetylglucosaminidase acting on complex asparagine-linked oligosaccharides
    • Yamamoto K, Kadowaki S, Fujisaki M, Kumagai H, Tochikura T (1994) Novel specificities of Mucor hiemalis endo-beta -N-acetylglucosaminidase acting on complex asparagine-linked oligosaccharides. Biosci, Biotechnol, Biochem 58: 72-77.
    • (1994) Biosci, Biotechnol, Biochem , vol.58 , pp. 72-77
    • Yamamoto, K.1    Kadowaki, S.2    Fujisaki, M.3    Kumagai, H.4    Tochikura, T.5
  • 13
    • 22144440651 scopus 로고    scopus 로고
    • Synthesis of bioactive glycopeptides through endoglycosidase-catalyzed transglycosylation
    • Wang L-X, Singh S, Ni J (2004) Synthesis of bioactive glycopeptides through endoglycosidase-catalyzed transglycosylation. ACS Symp Ser 873: 73-92.
    • (2004) ACS Symp Ser , vol.873 , pp. 73-92
    • Wang, L.-X.1    Singh, S.2    Ni, J.3
  • 14
    • 33645020843 scopus 로고    scopus 로고
    • Toward oligosaccharide- and glycopeptide-based HIV vaccines
    • Wang L-X (2006) Toward oligosaccharide- and glycopeptide-based HIV vaccines. Curr Opin Drug Discovery Dev 9: 194-206.
    • (2006) Curr Opin Drug Discovery Dev , vol.9 , pp. 194-206
    • Wang, L.-X.1
  • 15
    • 46549088526 scopus 로고    scopus 로고
    • Chemoenzymatic synthesis of glycopeptides and glycoproteins through endoglycosidase-catalyzed transglycosylation
    • Wang L-X (2008) Chemoenzymatic synthesis of glycopeptides and glycoproteins through endoglycosidase-catalyzed transglycosylation. Carbohydr Res 343: 1509-1522.
    • (2008) Carbohydr Res , vol.343 , pp. 1509-1522
    • Wang, L.-X.1
  • 16
    • 22144450662 scopus 로고    scopus 로고
    • Highly Efficient Endoglycosidase-Catalyzed Synthesis of Glycopeptides Using Oligosaccharide Oxazolines as Donor Substrates
    • Li B, Zeng Y, Hauser S, Song H, Wang L-X (2005) Highly Efficient Endoglycosidase-Catalyzed Synthesis of Glycopeptides Using Oligosaccharide Oxazolines as Donor Substrates. J Am Chem Soc 127: 9692-9693.
    • (2005) J Am Chem Soc , vol.127 , pp. 9692-9693
    • Li, B.1    Zeng, Y.2    Hauser, S.3    Song, H.4    Wang, L.-X.5
  • 17
    • 41949130819 scopus 로고    scopus 로고
    • Mutants of Mucor hiemalis Endo-beta -N-acetylglucosaminidase Show Enhanced Trans-glycosylation and Glycosynthase-like Activities
    • Umekawa M, Huang W, Li B, Fujita K, Ashida H, et al. (2008) Mutants of Mucor hiemalis Endo-beta -N-acetylglucosaminidase Show Enhanced Trans-glycosylation and Glycosynthase-like Activities. J Biol Chem 283: 4469-4479.
    • (2008) J Biol Chem , vol.283 , pp. 4469-4479
    • Umekawa, M.1    Huang, W.2    Li, B.3    Fujita, K.4    Ashida, H.5
  • 18
    • 53849101862 scopus 로고    scopus 로고
    • Expeditious Chemoenzymatic Synthesis of Homogeneous N-Glycoproteins Carrying Defined Oligosaccharide Ligands
    • Ochiai H, Huang W, Wang L-X (2008) Expeditious Chemoenzymatic Synthesis of Homogeneous N-Glycoproteins Carrying Defined Oligosaccharide Ligands. J Am Chem Soc 130: 13790-13803.
    • (2008) J Am Chem Soc , vol.130 , pp. 13790-13803
    • Ochiai, H.1    Huang, W.2    Wang, L.-X.3
  • 19
    • 52949115690 scopus 로고    scopus 로고
    • Glycoengineering of Human IgG1-Fc through Combined Yeast Expression and in Vitro Chemoenzymatic Glycosylation
    • Wei Y, Li C, Huang W, Li B, Strome S, et al. (2008) Glycoengineering of Human IgG1-Fc through Combined Yeast Expression and in Vitro Chemoenzymatic Glycosylation. Biochemistry 47: 10294-10304.
    • (2008) Biochemistry , vol.47 , pp. 10294-10304
    • Wei, Y.1    Li, C.2    Huang, W.3    Li, B.4    Strome, S.5
  • 20
    • 0032503519 scopus 로고    scopus 로고
    • Glycosynthases: Mutant Glycosidases for Oligosaccharide Synthesis
    • Mackenzie LF, Wang Q, Warren RAJ, Withers SG (1998) Glycosynthases: Mutant Glycosidases for Oligosaccharide Synthesis. J Am Chem Soc 120: 5583-5584.
    • (1998) J Am Chem Soc , vol.120 , pp. 5583-5584
    • Mackenzie, L.F.1    Wang, Q.2    Warren, R.A.J.3    Withers, S.G.4
  • 22
    • 42149195630 scopus 로고    scopus 로고
    • Synthesis and inhibitory activity of oligosaccharide thiazolines as a class of mechanism-based inhibitors for endo-beta -N-acetylglucosaminidases
    • Li B, Takegawa K, Suzuki T, Yamamoto K, Wang L-X (2008) Synthesis and inhibitory activity of oligosaccharide thiazolines as a class of mechanism-based inhibitors for endo-beta -N-acetylglucosaminidases. Bioorg Med Chem 16: 4670-4675.
    • (2008) Bioorg Med Chem , vol.16 , pp. 4670-4675
    • Li, B.1    Takegawa, K.2    Suzuki, T.3    Yamamoto, K.4    Wang, L.-X.5
  • 23
    • 0034636840 scopus 로고    scopus 로고
    • Structural Basis for the Substrate Specificity of Endo-beta -N-acetylglucosaminidase F3
    • Waddling CA, Plummer TH Jr, Tarentino AL, Van Roey P (2000) Structural Basis for the Substrate Specificity of Endo-beta -N-acetylglucosaminidase F3. Biochemistry 39: 7878-7885.
    • (2000) Biochemistry , vol.39 , pp. 7878-7885
    • Waddling, C.A.1    Plummer Jr, T.H.2    Tarentino, A.L.3    Van Roey, P.4
  • 24
    • 0034815767 scopus 로고    scopus 로고
    • Tryptophan-216 is essential for the transglycosylation activity of Endo-beta -N-acetylglucosaminidase A
    • Fujita K, Takegawa K (2001) Tryptophan-216 is essential for the transglycosylation activity of Endo-beta -N-acetylglucosaminidase A. Biochem Biophys Res Commun 283: 680-686.
    • (2001) Biochem Biophys Res Commun , vol.283 , pp. 680-686
    • Fujita, K.1    Takegawa, K.2
  • 25
    • 13444291246 scopus 로고    scopus 로고
    • A novel fluorescence-based assay for the transglycosylation activity of endo-beta -N-acetylglucosaminidases
    • Hauser S, Song H, Li H, Wang L-X (2005) A novel fluorescence-based assay for the transglycosylation activity of endo-beta -N-acetylglucosaminidases. Biochem Biophys Res Commun 328: 580-585.
    • (2005) Biochem Biophys Res Commun , vol.328 , pp. 580-585
    • Hauser, S.1    Song, H.2    Li, H.3    Wang, L.-X.4
  • 26
    • 34547700228 scopus 로고    scopus 로고
    • (NZ)CH...O contacts assist crystallization of a ParB-like nuclease
    • Shaw N, Cheng C, Tempel W, Chang J, Ng J, et al. (2007) (NZ)CH...O contacts assist crystallization of a ParB-like nuclease. BMC Struct Biol 7: 46-51.
    • (2007) BMC Struct Biol , vol.7 , pp. 46-51
    • Shaw, N.1    Cheng, C.2    Tempel, W.3    Chang, J.4    Ng, J.5
  • 27
    • 0031059866 scopus 로고    scopus 로고
    • Processing of x-ray diffraction data collected in oscillation mode
    • Otwinowski Z, Minor W (1997) Processing of x-ray diffraction data collected in oscillation mode. Methods Enzymol 276: 307-326.
    • (1997) Methods Enzymol , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 31
    • 0032872798 scopus 로고    scopus 로고
    • Density modification for macromolecular phase improvement
    • Cowtan KD, Zhang KY (1999) Density modification for macromolecular phase improvement. Prog Biophys Mol Biol 72: 245-270.
    • (1999) Prog Biophys Mol Biol , vol.72 , pp. 245-270
    • Cowtan, K.D.1    Zhang, K.Y.2
  • 34
    • 0032964481 scopus 로고    scopus 로고
    • Automated protein model building combined with iterative structure refinement
    • Perrakis A, Morris R, Lamzin VS (1999) Automated protein model building combined with iterative structure refinement. Nat Struct Biol 6: 458-463.
    • (1999) Nat Struct Biol , vol.6 , pp. 458-463
    • Perrakis, A.1    Morris, R.2    Lamzin, V.S.3
  • 35
    • 0030498233 scopus 로고    scopus 로고
    • xdlMAPMAN and xdlDATAMAN - programs for reformatting, analysis and manipulation of biomacromolecular electrondensity maps and reflection data sets
    • Kleywegt GJ, Jones TA (1996) xdlMAPMAN and xdlDATAMAN - programs for reformatting, analysis and manipulation of biomacromolecular electrondensity maps and reflection data sets. Acta Crystallogr, Sect D: Biol Crystallogr D52: 826-828.
    • (1996) Acta Crystallogr, Sect D: Biol Crystallogr , vol.D52 , pp. 826-828
    • Kleywegt, G.J.1    Jones, T.A.2
  • 38
    • 3242886389 scopus 로고    scopus 로고
    • MolPROBITY: Structure validation and all-atom contact analysis for nucleic acids and their complexes
    • Davis IW, Murray LW, Richardson JS, Richardson DC (2004) MolPROBITY: Structure validation and all-atom contact analysis for nucleic acids and their complexes. Nucleic Acids Res 32: W615-W619.
    • (2004) Nucleic Acids Res , vol.32
    • Davis, I.W.1    Murray, L.W.2    Richardson, J.S.3    Richardson, D.C.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.