Heat-inducible C3HC4 type RING zinc finger protein gene from Capsicum annuum enhances growth of transgenic tobacco

Planta

Volumn 229, Issue 4, 2009, Pages 861-871

  Zeba, Naheed ^a   Isbat, Mohammad ^b   Kwon, Nak Jung ^a,c   Lee, Mi Ok ^a   Kim, Seong Ryong ^b   Hong, Choo Bong ^a  

^a Seoul National University   (South Korea)

^b Sogang University   (South Korea)

^c UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

Capsicum; Enhanced growth; Heat inducible; RING zinc finger protein; Transgenic tobacco plants

Indexed keywords

DNA BINDING PROTEIN; PLANT RNA; VEGETABLE PROTEIN; ZINC FINGER PROTEIN;

ARTICLE; DNA MICROARRAY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; HEAT; METABOLISM; METHODOLOGY; NUCLEIC ACID HYBRIDIZATION; PEPPER; PHENOTYPE; PLANT GROWTH; PLANT LEAF; PLANT ROOT; TOBACCO; TRANSGENIC PLANT;

CAPSICUM; DNA-BINDING PROTEINS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; HOT TEMPERATURE; HYPOCOTYL; NUCLEIC ACID HYBRIDIZATION; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PHENOTYPE; PLANT LEAVES; PLANT PROTEINS; PLANT ROOTS; PLANTS, GENETICALLY MODIFIED; RNA, PLANT; TOBACCO; ZINC FINGERS;

AGROBACTERIUM; CAPSICUM; CAPSICUM ANNUUM; CAPSICUM FRUTESCENS; NICOTIANA OBTUSIFOLIA; NICOTIANA TABACUM; RHIZOBIUM;

EID: 61349202133     PISSN: 00320935     EISSN: 14322048     Source Type: Journal    
DOI: 10.1007/s00425-008-0884-0     Document Type: Article

References (44)

1. NN Alexandrov ME Troukhan VV Brover T Tatarinova RB Flavell KA Feldmann 2006 Features of Arabidopsis gene and genome discovered using full-length cDNAs Plant Mol Biol 60 71 87
2. P Armengaud R Breitling A Amtmann 2004 The potassium-dependent transcriptome of Arabidopsis reveals a prominent role of jasmonic acid in nutrient signaling Plant Physiol 136 2556 2576
3. TU Arumugam E Davies EH Morita S Abe 2007 Sequence, expression and tissue localization of a gene encoding a makorin RING zinc-finger protein in germinating rice (Oryza sativa L. ssp. Japonica) seeds Plant Physiol Biochem 45 767 780
4. C Bernhardt ML Tierney 2000 Expression of AtPRP3, a proline-rich structural cell wall protein from Arabidopsis, is regulated by Cell-Type-specific developmental pathways involved in root hair formation Plant Physiol 122 705 714
5. XW Deng M Matsui N Wei D Wagner AM Chu KA Feldmann PH Quail 1992 COP1, and Arabidopsis regulatory gene, encodes a protein with both a zinc-binding motif and a G homologous domain Cell 71 791 801
6. L Ding JK Zhu 1997 A role for arabinogalactan-proteins in root epidermal cell expansion Planta 203 289 294
7. PS Freemont IM Hanson J Trowsdale 1991 A novel cysteine-rich sequence motif Cell 64 483 484
8. PS Freemont 2000 RING for destruction? Curr Biol 10 84 87
9. BJ Haas N Volfovsky CD Town M Troukhan N Alexandrov KA Feldmann RB Flavell O White SL Salzberg 2002 Full-length messenger RNA sequences greatly improve genome annotation Genome Biol 3 1 12
10. RB Horsch JE Fry NL Hoffmann D Eichholtz SG Rogers RT Fraley 1985 A simple and general method for transferring genes into plants Science 227 1229 1231
11. Isabel S, Leblanc E, Boissinot M, Boudreau DK, Grondin M, Picard FJ, Martel EA, Parham NJ, Chain PS, Bader DE, Mulvey MR, Bryden L, Roy PH, Ouellette M, Bergeron MG (2008) Divergence among genes encoding the elongation factor Tu of Yersinia species. J Bacteriol (Epub ahead of print)
12. CA Joazeiro SS Wing H Huang JD Leverson T Hunter YC Liu 1999 The tyrosin kinase negative regulator c-Cbl as a RING-type E2-dependent ubiquitin-protein ligase Science 286 309 312
13. JP Knox PJ Linstead J Peart C Cooper K Roberts 1991 Developmentally regulated epitopes of cell surface arabinogalactan proteins and their relation to root tissue pattern formation Plant J 1 317 326
14. 2 gene, XERICO confers drought tolerance through increased abscisic acid biosynthesis Plant J 47 343 355
15. B Mazumder P Sampath V Seshadri RK Maitra PE DiCorleto PL Fox 2003 Regulated release of L13a from the 60S ribosomal subunit as a mechanism of transcript-specific translational control Cell 115 187 198
16. T Murashige F Skoog 1962 A revised medium for rapid growth and bioassays with tobacco tissue cultures Planta 157 385 391
17. MH Park Y Suzuki M Chono JP Knox I Yamaguchi 2003 CsAGP1, a gibberellin-responsive gene from cucumber hypocotyls, encodes a classical arabinogalactan protein and is involved in stem elongation Plant Physiol 131 1450 1459
18. J Peng DE Richards T Moritz A Cano-Delgado NP Harberd 1999 Extragenic Suppressors of the Arabidopsis gai mutation alter the dose-response relationship of diverse gibberellin responses Plant Physiol 119 1199 1208
19. RI Pennell K Roberts 1990 Sexual development in the pea is presaged by altered expression of arabinogalactan protein Nature 344 547 549
20. S Raab S Hoth 2007 A mutation in the AtPRP4 splicing factor gene suppresses seed development in Arabidopsis Plant Biol (Stuttg) 9 447 452
21. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor Press, New York
22. T Sasaki T Matsumoto K Yamamoto K Sakata T Baba Y Katayose J Wu Y Niimura Z Cheng Y Nagamura BA Antonio H Kanamori S Hosokawa M Masukawa K Arikawa Y Chiden M Hayashi M Okamoto T Ando H Aoki K Arita M Hamada C Harada S Hijishita M Honda Y Ichikawa A Idonuma M Iijima M Ikeda M Ikeno S Ito T Ito Y Ito Y Ito A Iwabuchi K Kamiya W Karasawa S Katagiri A Kikuta N Kobayashi I Kono K Machita T Maehara H Mizuno T Mizubayashi Y Mukai H Nagasaki M Nakashima Y Nakama Y Nakamichi M Nakamura N Namiki M Negishi I Ohta N Ono S Saji K Sakai M Shibata T Shimokawa A Shomura J Song Y Takazaki K Terasawa K Tsuji K Waki H Yamagata H Yamane S Yoshiki R Yoshihara K Yukawa H Zhong H Iwama T Endo H Ito JH Hahn HI Kim MY Eun M Yano J Jiang T Gojobori 2002 The genome sequence and structure of rice chromosome 1 Nature 420 312 316
23. AJ Saurin KLB Borden MN Boddy PS Freemont 1996 Does this have a familiar RING? Trends Biochem Sci 21 208 214
24. B Schulz HU Kolukisaoglu 2006 Genomics of plant ABC transporters: the alphabet of photosynthetic life forms or just holes in membranes? FEBS Lett 580 1010 1016
25. 4 zinc RING finger of the Arabidopsis PEX10 for photorespiration and leaf peroxisome contact with chloroplasts Proc Natl Acad Sci USA 104 1069 1074
26. GJ Seifert K Roberts 2007 The biology of arabinogalactan proteins Annu Rev Plant Biol 58 137 161
27. ES Seong D Choi HS Cho CK Lim HJ Cho MH Wang 2007 Characterization of a stress-responsive ankyrin repeat-containing zinc finger protein of Capsicum annuum (CaKR1) J Biochem Mol Biol 40 952 958
28. MD Serpe EA Nothnagel 1994 Effects of Yariv phenylglycosides on Rosa cell suspension: evidence for the involvement of arabinogalactan-proteins in cell proliferation Planta 193 542 550
29. M Serrano P Guzman 2004 Isolation and gene expression analysis of Arabidopsis thaliana mutants with constitutive expression of ATL2, an early elicitor-response RING-H2 zinc-finger gene Genetics 167 919 929
30. H Shi Y Kim Y Guo B Stevenson JK Zhu 2003 The Arabidopsis SOS5 locus encodes a putative cell surface adhesion protein and is required for normal cell expansion Plant Cell 15 19 32
31. C Spitzer S Schellmann A Sabovljevic M Shahriari C Keshavaiah N Bechtold M Herzog S Müller FG Hanisch M Hülskamp 2006 The Arabidopsis elch mutant reveals functions of an ESCRT component in cytokinesis Development 133 4679 4689
32. R Srinivasan M Mishra L Wu Z Yin MK Balasubramanian 2008 The bacterial cell division protein FtsZ assembles into cytoplasmic rings in fission yeast Genes Dev 22 1741 1746
33. MC Suh CB Hong SS Kim WS Sim 1994 Transgenic tobacco plants with Bacillus thuringiensis δ-endotoxin gene resistant to Korean born tobacco budworms Mol Cells 4 211 719
34. KU Torii TW McNellis XW Deng 1998 Functional dissection of Arabidopsis COP1 reveals specific roles of its three structural modules in light control of seedling development EMBO J 17 5577 5587
35. S Vij AK Tyagi 2006 Genome-wide analysis of the associated protein (SAP) gene family containing A20/AN1 zinc-finger(s) in rice and their phylogenetic relationship with Arabidopsis Mol Gen Genomics 276 171 565
36. WGT Willats JP Knox 1996 A-role for arabinogalactan-proteins in plant cell expansions: evidence from studies on the interaction of β-glucosyl Yariv reagent with seedlings of Arabidopsis thaliana Plant J 9 919 925
37. C Workman LJ Jensen H Jarmer R Berka L Gautier HB Nielser HH Saxild C Nielsen S Brunak S Knudsen 2002 A new non-linear normalization method for reducing variability in DNA microarray experiments Genome biol 3 1 16
38. H Wu E Wong J Ogdahi AY Cheung 2000 A pollen tube growth-promoting arabinogalactan protein from Nicotiana alata is similar to the tobacco TTS protein Plant J 22 165 176
39. R Xu QQ Li 2003 A RING-H2 zinc-finger protein gene RIE1 is essential for seed development in Arabidopsis Plant Mol Biol 53 37 50
40. J Yang HS Sardar KR McGovern Y Zhang AM Showalter 2007 A lysine-rich arabinogalactan protein in Arabidopsis is essential for plant growth and development, including cell division and expansion Plant J 49 629 640
41. CM Yoo J Wen CM Motes JA Sparks EB Blancaflor 2008 A class one ADP-ribosylation factor GTPase-activating protein is critical for maintaining directional root hair growth in Arabidopsis thaliana Plant Physiol 147 1659 1674
42. HJ Yu P Hogan V Sundaresan 2005 Analysis of the female gametophyte transcriptome of Arabidopsis by comparative expression profiling Plant Physiol 139 1853 1869
43. J Yuan A Kight RL Goforth M Moore EC Peterson J Sakon R Henry 2002 ATP stimulates signal recognition particle (SRP)/FtsY-supported protein integration in chloroplasts J Biol Chem 277 32400 32404
44. N Zeba M Ashrafuzzaman CB Hong 2006 Molecular characterization of the Capsicum annuum RING Zinc Finger Protein 1 (CaRZFP1) gene induced by abiotic stresses J Plant Biol 49 484 490