Genomic alterations in diffuse-type gastric cancer as shown by high-resolution comparative genomic hybridization

Cancer Genetics and Cytogenetics

Volumn 190, Issue 1, 2009, Pages 1-7

  Satomi Takeno, Sylvia ^a   Leal, Mariana Ferreira ^a   Frias Lisboa, Luara Carolina ^a   Nunes Lipay, Mônica Vannucci ^a   Khayat, André Salim ^b   Assumpção, Paulo Pimentel ^c   Burbano, Rommel Rodríguez ^b   de Arruda Cardoso Smith, Marília ^a  

^a FEDERAL UNIVERSITY OF SÃO PAULO   (Brazil)

^b Department of Biology   (Brazil)

^c Hosp Univ Joao de Barros Barreto   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; ANEUSOMY; ARTICLE; CARCINOGENESIS; CHROMOSOMAL INSTABILITY; CHROMOSOME 11P; CHROMOSOME 11Q; CHROMOSOME 13Q; CHROMOSOME 14Q; CHROMOSOME 16P; CHROMOSOME 18Q; CHROMOSOME 1P; CHROMOSOME 2P; CHROMOSOME 3Q; CHROMOSOME 4Q; CHROMOSOME 5Q; CHROMOSOME 7P; CHROMOSOME 9P; CHROMOSOME ABERRATION; CHROMOSOME LOSS; COMPARATIVE GENOMIC HYBRIDIZATION; DIFFUSE GASTRIC CANCER; FEMALE; GENE NUMBER; HUMAN; HUMAN TISSUE; MALE; PRIORITY JOURNAL; STOMACH CANCER;

ADENOCARCINOMA; ADULT; AGED; CHROMOSOME ABERRATIONS; CHROMOSOMES, HUMAN, PAIR 1; CHROMOSOMES, HUMAN, PAIR 15; CHROMOSOMES, HUMAN, PAIR 16; CHROMOSOMES, HUMAN, PAIR 7; COHORT STUDIES; COMPARATIVE GENOMIC HYBRIDIZATION; CYTOGENETIC ANALYSIS; FEMALE; GENOMIC INSTABILITY; HUMANS; MALE; MIDDLE AGED; STOMACH NEOPLASMS;

EID: 61349201693     PISSN: 01654608     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cancergencyto.2008.09.007     Document Type: Article

References (46)

1. Parkin D.M., Bray F., Ferlay J., and Pisani P. Global cancer statistics. CA Cancer J Clin 2005 55 (2002) 74-108
2. World Health Organization (WHO). Avaible at: http://www.who.int/en/. Accessed January 29, 2008.
3. Resende Als M.I., and Koifman S. Mortalidade por câncer gástrico no Estado do Pará, 1980-1997. Arq Gastroenterol 43 (2006) 247-252
4. Moutinho V. Epidemiologic aspects of gastric cancer in Belém. ABCD: Arquivos Brasileiros de Cirurgia Digestiva 2 (1986) 204-213
5. Kimura Y., Noguchi T., Kawahara K., Kashima K., Daa T., and Yokoyama S. Genetic alterations in 102 primary gastric cancers by comparative genomic hybridization: gain of 20q and loss of 18q are associated with tumor progression. Mod Pathol 17 (2004) 1328-1337
6. Buffart T.E., Carvalho B., Mons T., Reis R.M., Moutinho C., Silva P., van Grieken N.C., Vieth M., Stolte M., van de Velde C.J., Schrock E., Matthaei A., Ylstra B., Carneiro F., and Meijer G.A. DNA copy number profiles of gastric cancer precursor lesions. BMC Genomics 8 (2007) 345
7. Smith M.G., Hold G.L., Tahara E., and El-Omar E.M. Cellular and molecular aspects of gastric cancer. World J Gastroenterol 12 (2006) 2979-2990
8. Lauren P. The Two Histological Main Types of Gastric Carcinoma: Diffuse and So-Called Intestinal-Type Carcinoma. an Attempt at a Histo-Clinical Classification. Acta Pathol Microbiol Scand 64 (1965) 31-49
9. Lengauer C., Kinzler K.W., and Vogelstein B. Genetic instabilities in human cancers. Nature 396 (1998) 643-649
10. Panani A.D. Cytogenetic and molecular aspects of gastric cancer: Clinical implications. Cancer Lett (2008)
11. Weiss M.M., Kuipers E.J., Postma C., Snijders A.M., Pinkel D., Meuwissen S.G., Albertson D., and Meijer G.A. Genomic alterations in primary gastric adenocarcinomas correlate with clinicopathological characteristics and survival. Cell Oncol 26 (2004) 307-317
12. Kokkola A., Monni O., Puolakkainen P., Larramendy M.L., Victorzon M., Nordling S., Haapiainen R., Kivilaakso E., and Knuutila S. 17q12-21 amplicon, a novel recurrent genetic change in intestinal type of gastric carcinoma: a comparative genomic hybridization study. Genes Chromosomes Cancer 20 (1997) 38-43
13. Koo S.H., Kwon K.C., Shin S.Y., Jeon Y.M., Park J.W., Kim S.H., and Noh S.M. Genetic alterations of gastric cancer: comparative genomic hybridization and fluorescence In situ hybridization studies. Cancer Genet Cytogenet 117 (2000) 97-103
14. Okada K., Sugihara H., Bamba M., Bamba T., and Hattori T. Sequential numerical changes of chromosomes 7 and 18 in diffuse-type stomach cancer cell lines: combined comparative genomic hybridization, fluorescence in situ hybridization, and ploidy analyses. Cancer Genet Cytogenet 118 (2000) 99-107
15. Noguchi T., Wirtz H.C., Michaelis S., Gabbert H.E., and Mueller W. Chromosomal imbalances in gastric cancer. Correlation with histologic subtypes and tumor progression. Am J Clin Pathol 115 (2001) 828-834
16. Wu M.S., Chang M.C., Huang S.P., Tseng C.C., Sheu J.C., Lin Y.W., Shun C.T., Lin M.T., and Lin J.T. Correlation of histologic subtypes and replication error phenotype with comparative genomic hybridization in gastric cancer. Genes Chromosomes Cancer 30 (2001) 80-86
17. Kurihara Y., Ghazizadeh M., Bo H., Shimizu H., Kawanami O., Moriyama Y., and Onda M. Genome-wide screening of laser capture microdissected gastric signet-ring cell carcinomas. J Nippon Med Sch 69 (2002) 235-242
18. Wu C.W., Chen G.D., Fann C.S., Lee A.F., Chi C.W., Liu J.M., Weier U., and Chen J.Y. Clinical implications of chromosomal abnormalities in gastric adenocarcinomas. Genes Chromosomes Cancer 35 (2002) 219-231
19. Peng D.F., Sugihara H., Mukaisho K., Tsubosa Y., and Hattori T. Alterations of chromosomal copy number during progression of diffuse-type gastric carcinomas: metaphase- and array-based comparative genomic hybridization analyses of multiple samples from individual tumours. J Pathol 201 (2003) 439-450
20. Takada H., Imoto I., Tsuda H., Sonoda I., Ichikura T., Mochizuki H., Okanoue T., and Inazawa J. Screening of DNA copy-number aberrations in gastric cancer cell lines by array-based comparative genomic hybridization. Cancer Sci 96 (2005) 100-110
21. Sobin L.H., and Wittekind C.H. TNM classification of malignant tumours (2002), Wiley-Liss, New York
22. Batista dos Santos S.E., Rodrigues J.D., Ribeiro-dos-Santos A.K., and Zago M.A. Differential contribution of indigenous men and women to the formation of an urban population in the Amazon region as revealed by mtDNA and Y-DNA. Am J Phys Anthropol 109 (1999) 175-180
23. Kallioniemi A., Kallioniemi O.P., Sudar D., Rutovitz D., Gray J.W., Waldman F., and Pinkel D. Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors. Science 258 (1992) 818-821
24. Sakakura C., Mori T., Sakabe T., Ariyama Y., Shinomiya T., Date K., Hagiwara A., Yamaguchi T., Takahashi T., Nakamura Y., Abe T., and Inazawa J. Gains, losses, and amplifications of genomic materials in primary gastric cancers analyzed by comparative genomic hybridization. Genes Chromosomes Cancer 24 (1999) 299-305
25. Burbano R.R., Assumpcao P.P., Leal M.F., Calcagno D.Q., Guimaraes A.C., Khayat A.S., Takeno S.S., Chen E.S., and De Arruda Cardoso S.M. C-MYC locus amplification as metastasis predictor in intestinal-type gastric adenocarcinomas: CGH study in Brazil. Anticancer Res 26 (2006) 2909-2914
26. Calcagno D.Q., Leal M.F., Taken S.S., Assumpcao P.P., Demachki S., Smith Mde A., and Burbano R.R. Aneuploidy of chromosome 8 and C-MYC amplification in individuals from northern Brazil with gastric adenocarcinoma. Anticancer Res 25 (2005) 4069-4074
27. Assumpcao P.P., Ishak G., Chen E.S., Takeno S.S., Leal M.F., Guimaraes A.C., Calcagno D.Q., Khayat A.S., Demachki S., Smith Mde A., and Burbano R.R. Numerical aberrations of chromosome 8 detected by conventional cytogenetics and fluorescence in situ hybridization in individuals from northern Brazil with gastric adenocarcinoma. Cancer Genet Cytogenet 169 (2006) 45-49
28. Calcagno D.Q., Leal M.F., Seabra A.D., Khayat A.S., Chen E.S., Demachki S., Assumpcao P.P., Faria M.H., Rabenhorst S.H., Ferreira M.V., de Arruda Cardoso Smith M., and Burbano R.R. Interrelationship between chromosome 8 aneuploidy, C-MYC amplification and increased expression in individuals from northern Brazil with gastric adenocarcinoma. World J Gastroenterol 12 (2006) 6207-6211
29. Raiol Lcc S.E., Fonseca D.M., Leal M.F., Guimarães A.C., Calcagno D.Q., Khayat A.S., Assumpção P.P., Smith M.A.C., and Burbano R.R. Interrelationship between MYC gene numerical aberrations and protein expression in individuals from northern Brazil with early gastric adenocarcinoma. Cancer Genet Cytogenet 181 (2008) 31-35
30. Kallioniemi A., Visakorpi T., Karhu R., Pinkel D., and Kallioniemi O.P. Gene Copy Number Analysis by Fluorescence in Situ Hybridization and Comparative Genomic Hybridization. Methods 9 (1996) 113-121
31. Baudis M. Genomic imbalances in 5918 malignant epithelial tumors: an explorative meta-analysis of chromosomal CGH data. BMC Cancer 7 (2007) 226
32. Nessling M., Solinas-Toldo S., Wilgenbus K.K., Borchard F., and Lichter P. Mapping of chromosomal imbalances in gastric adenocarcinoma revealed amplified protooncogenes MYCN, MET, WNT2, and ERBB2. Genes Chromosomes Cancer 23 (1998) 307-316
33. Fu S., Wang B., Guan X., Xia J., Lu S., Zhang G., and Li P. [Comparative genomic hybridization analysis of primary gastric carcinomas]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi 16 (1999) 353-355
34. Guan X.Y., Fu S.B., Xia J.C., Fang Y., Sham J.S., Du B.D., Zhou H., Lu S., Wang B.Q., Lin Y.Z., Liang Q., Li X.M., Du B., Ning X.M., Du J.R., Li P., and Trent J.M. Recurrent chromosome changes in 62 primary gastric carcinomas detected by comparative genomic hybridization. Cancer Genet Cytogenet 123 (2000) 27-34
35. van Grieken N.C., Weiss M.M., Meijer G.A., Hermsen M.A., Scholte G.H., Lindeman J., Craanen M.E., Bloemena E., Meuwissen S.G., Baak J.P., and Kuipers E.J. Helicobacter pylori-related and -non-related gastric cancers do not differ with respect to chromosomal aberrations. J Pathol 192 (2000) 301-306
36. Tay S.T., Leong S.H., Yu K., Aggarwal A., Tan S.Y., Lee C.H., Wong K., Visvanathan J., Lim D., Wong W.K., Soo K.C., Kon O.L., and Tan P. A combined comparative genomic hybridization and expression microarray analysis of gastric cancer reveals novel molecular subtypes. Cancer Res 63 (2003) 3309-3316
37. Wang Q., Wang B., Guan X., Gao H., Cheng H., Zhang Q., Huang C., Li P., and Fu S. Analysis of comparative genomic hybridization and loss of heterozygosity in 43 primary gastric carcinomas. Chin Med J (Engl) 116 (2003) 517-523
38. Zhu Y.Q., Zhu Z.G., Liu B.Y., Chen X.H., Yin H.R., and Wang X.H. [Chromosomal alterations analyzed by comparative genomic hybridization in primary gastric carcinoma]. Zhonghua Wei Chang Wai Ke Za Zhi 10 (2007) 160-164
39. Xiangming C., Natsugoe S., Takao S., Hokita S., Ishigami S., Tanabe G., Baba M., Kuroshima K., and Aikou T. Preserved Smad4 expression in the transforming growth factor beta signaling pathway is a favorable prognostic factor in patients with advanced gastric cancer. Clin Cancer Res 7 (2001) 277-282
40. Kim Y.H., Lee H.S., Lee H.J., Hur K., Kim W.H., Bang Y.J., Kim S.J., Lee K.U., Choe K.J., and Yang H.K. Prognostic significance of the expression of Smad4 and Smad7 in human gastric carcinomas. Ann Oncol 15 (2004) 574-580
41. Sud R., Wells D., Talbot I.C., and Delhanty J.D. Genetic alterations in gastric cancers from British patients. Cancer Genet Cytogenet 126 (2001) 111-119
42. Reynolds A.B., and Carnahan R.H. Regulation of cadherin stability and turnover by p120ctn: implications in disease and cancer. Semin Cell Dev Biol 15 (2004) 657-663
43. Liu Y.C., Shen C.Y., Wu H.S., Hsieh T.Y., Chan D.C., Chen C.J., Yu J.C., Yu C.P., Harn H.J., Chen P.J., Hsieh C.B., Chen T.W., and Hsu H.M. Mechanisms inactivating the gene for E-cadherin in sporadic gastric carcinomas. World J Gastroenterol 12 (2006) 2168-2173
44. Brien T.P., Depowski P.L., Sheehan C.E., Ross J.S., and McKenna B.J. Prognostic factors in gastric cancer. Mod Pathol 11 (1998) 870-877
45. Karatzas G., Karayiannakis A.J., Syrigos K.N., Chatzigianni E., Papanikolaou S., Simatos G., Papanikolaou D., and Bogris S. Expression patterns of the E-cadherin-catenin cell-cell adhesion complex in gastric cancer. Hepatogastroenterology 47 (2000) 1465-1469
46. Guimaraes A.C., Lima E.M., Khayat A.S., Girao Faria M.H., Barem Rabenhorst S.H., Pitombeira M.V., Assumpcao P.P., de Oliveira Bahia M., Lima de Lima P.D., de Arruda Cardoso Smith M., and Burbano R.R. Interrelationships among chromosome aneuploidy, promoter hypermethylation, and protein expression of the CDKN2A gene in individuals from northern Brazil with gastric adenocarcinoma. Cancer Genet Cytogenet 179 (2007) 45-51