Genome sequencing and phylogenetic analysis of three avian influenza H9N2 subtypes in Guangxi

Virologica Sinica

Volumn 24, Issue 1, 2009, Pages 37-44

  Xie, Zhi Xun ^a   Dong, Jian Bao ^a   Tang, Xiao Fei ^a   Liu, Jia Bo ^a   Pang, Yao Shan ^a   Deng, Xian Wen ^a   Xie, Zhi Qin ^a   Xie, Li Ji ^a   Khan, Mazhar I ^b  

^a GUANGXI VETERINARY RESEARCH INSTITUTE   (China)

^b UNIVERSITY OF CONNECTICUT   (United States)

Author keywords

Avian influenza virus (AIV); Complete genes; H9N2 subtype; Sequencing and analysis

Indexed keywords

ADENOSINE; CYTOSINE; GLYCINE; GUANOSINE; INFLUENZA VIRUS HEMAGGLUTININ; ISOLEUCINE; LEUCINE; NUCLEOTIDE DERIVATIVE; THREONINE;

AMINO ACID SEQUENCE; ARTICLE; AVIAN INFLUENZA; CHINA; CONTROLLED STUDY; GENE SEQUENCE; GENOME ANALYSIS; INFLUENZA VIRUS A H9N2; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; SEQUENCE HOMOLOGY; STRAIN DIFFERENCE; VIRUS GENE; VIRUS ISOLATION; VIRUS STRAIN;

AVES; AVIAN INFLUENZA VIRUS; GALLUS GALLUS;

EID: 61349165561     PISSN: 16740769     EISSN: 1995820X     Source Type: Journal    
DOI: 10.1007/s12250-009-2985-8     Document Type: Article

References (18)

1. Alexander D J. 1982. Avian influenza: Recent developments. Veter Bull, 52(6): 341-359.
2. Butt K M, Smith G J D, Chen H, et al. 2005. Human infection with an avian H9N2 influenza A virus in Hong Kong in 2003. J Clin Microbiol, 43(11): 5760-5767.
3. Choi Y K, Ozaki H, Webby R J, et al. 2004. Continuing evolution of H9N2 influenza viruses in southeastern China. J Virol, 78(16): 8609-8614.
4. Guan Y, Shortridge K F, Krauss S, et al. 2000. H9N2 influenza viruses possessing H5N1-like internal genomes continue to circulate in poultry in southeastern China. J Virol, 74(20): 9372-9380.
5. Guo Y J, Krauss S, Senne D A, et al. 2000. Characterization of the pathogenicity of members of the newly established H9N2 influenza virus lineages in Asia. Virology, 267(2): 279-288.
6. Kwon H J, Cho S H, Kim M C, et al. 2006. Molecular epizootiology of recurrent low pathogenic avian influenza by H9N2 subtype virus in Korea. Avian Pathol, 35(4): 309-315.
7. Li K S, Xu K M, Peiris S M, et al. 2003. Characterization of H9 subtype influenza viruses from the ducks of southern China: A candidate for the next influenza pandemic in humans?. J Virol, 77(12): 6988-6994.
8. Lin Y P, Shaw M, Gregory V, et al. 2000. Avian-tohuman transmission of H9N2 subtype influenza A viruses: Relationship between H9N2 and H5N1 human isolates. Proc Natl Acad Sci U S A, 97(17): 9654-9658.
9. Liu H, Liu X F, Cheng J, Peng D, et al. 2003.Phylogenetic analysis of the hemagglutinin genes of twentysix avian influenza viruses of subtype H9N2 isolated from chickens in China during 1996-2001. Avian Dis, 47(1): 116-127.
10. Liu J H, Okazaki K, Shi W M, et al. 2003. Phylogenetic analysis of neuraminidase gene of H9N2 influenza viruses prevalent in chickens in China during 1995-2002. Virus Genes, 27(2): 197-202.
11. Lu J H, Liu X F, Shao W X, et al. 2005.Phylogenetic analysis of eight genes of H9N2 subtype influenza virus: A mainland China strain possessing early isolates' genes that have been circulating. Virus Genes, 31(2):163-169.
12. Matrosovich M N, Krauss S, Webster R G. 2001. H9N2 influenza A viruses from poultry in Asia have human viruslike receptor specificity. Virology, 281(2): 156-162.
13. Peiris M, Yuen K Y, Leung C W, et al. 1999. Human infection with influenza H9N2. Lancet, 354(9182): 916-917.
14. Steinhauer D A. 1999. Role of hemagglutinin cleavage for the pathogenicity of influenza virus. Virology, 258(1): 1-20.
15. Wang S, Shi W M, Mweene A, Wei H L, et al. 2005. Genetic analysis of the nonstructural (NS) genes of H9N2 chicken influenza viruses isolated in China during 1998-2002. Virus Genes, 31(3):329-335.
16. Webster R G, Bean W J, Gorman O T, et al. 1992. Evolution and ecology of influenza A viruses. Microbiol Reviews, 56(1): 152-179.
17. World Health Organization. 1980. A revision of the system of nomenclature for influenza viruses: A WHO memorandum. Bull World Health Organ, 58(40): 585-591.
18. Xie Z X, Pang Y S, Liu J B, et al. 2006.Amultiplex RT-PCR for detection of type A influenza virus and differentiation of avian H5, H7, and H9 hemagglutinin subtypes. Mol Cell Probes, 20(3):245-249.