메뉴 건너뛰기




Volumn 140, Issue 1-2, 2009, Pages 199-204

Analysis of Foot-and-mouth disease virus nucleotide sequence variation within naturally infected epithelium

Author keywords

Cloning; Consensus; Foot and mouth disease virus; Genetic diversity; Picornavirus; Sequence; Within host diversity

Indexed keywords

RNA DIRECTED DNA POLYMERASE;

EID: 60749123862     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.virusres.2008.10.012     Document Type: Article
Times cited : (14)

References (17)
  • 1
    • 0038722333 scopus 로고    scopus 로고
    • Curing of foot-and-mouth disease virus from persistently infected cells by ribavirin involves enhanced mutagenesis
    • Airaksinen A., Pariente N., Menendez-Arias L., and Domingo E. Curing of foot-and-mouth disease virus from persistently infected cells by ribavirin involves enhanced mutagenesis. Virology 311 2 (2003) 339-349
    • (2003) Virology , vol.311 , Issue.2 , pp. 339-349
    • Airaksinen, A.1    Pariente, N.2    Menendez-Arias, L.3    Domingo, E.4
  • 2
    • 33845443896 scopus 로고    scopus 로고
    • Escherichia coli DNA polymerase III epsilon subunit increases Moloney murine leukemia virus reverse transcriptase fidelity and accuracy of RT-PCR procedures
    • Arezi B., and Hogrefe H.H. Escherichia coli DNA polymerase III epsilon subunit increases Moloney murine leukemia virus reverse transcriptase fidelity and accuracy of RT-PCR procedures. Anal. Biochem. 360 1 (2007) 84-91
    • (2007) Anal. Biochem. , vol.360 , Issue.1 , pp. 84-91
    • Arezi, B.1    Hogrefe, H.H.2
  • 3
    • 0343867213 scopus 로고    scopus 로고
    • Molecular intermediates of fitness gain of an RNA virus: characterization of a mutant spectrum by biological and molecular cloning
    • Arias A., Lazaro E., Escarmis C., and Domingo E. Molecular intermediates of fitness gain of an RNA virus: characterization of a mutant spectrum by biological and molecular cloning. J. Gen. Virol. 82 Pt 5 (2001) 1049-1060
    • (2001) J. Gen. Virol. , vol.82 , Issue.PART 5 , pp. 1049-1060
    • Arias, A.1    Lazaro, E.2    Escarmis, C.3    Domingo, E.4
  • 4
    • 35148863041 scopus 로고    scopus 로고
    • Genetic and phenotypic variation of FMDV during serial passages in a natural host
    • Carrillo C., Lu Z., Borca M.V., Vagnozzi A., Kutish G.F., and Rock D.L. Genetic and phenotypic variation of FMDV during serial passages in a natural host. J. Virol. 81 20 (2007) 11341-11351
    • (2007) J. Virol. , vol.81 , Issue.20 , pp. 11341-11351
    • Carrillo, C.1    Lu, Z.2    Borca, M.V.3    Vagnozzi, A.4    Kutish, G.F.5    Rock, D.L.6
  • 6
    • 40049112232 scopus 로고    scopus 로고
    • Integrating genetic and epidemiological data to determine transmission pathways of Foot-and-mouth disease virus
    • Cottam E.M., Thébaud G., Wadsworth J., Gloster J., Mansley L., Paton D.J., King D.P., and Haydon D.T. Integrating genetic and epidemiological data to determine transmission pathways of Foot-and-mouth disease virus. Proc. Biol. Sci. 22 275(1637) (2008) 887-895
    • (2008) Proc. Biol. Sci. , vol.22 , Issue.275 1637 , pp. 887-895
    • Cottam, E.M.1    Thébaud, G.2    Wadsworth, J.3    Gloster, J.4    Mansley, L.5    Paton, D.J.6    King, D.P.7    Haydon, D.T.8
  • 8
    • 60749125839 scopus 로고    scopus 로고
    • Felsenstein, J, 2004. PHYLIP (Phylogeny Inference Package) version 3.66. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle
    • Felsenstein, J., 2004. PHYLIP (Phylogeny Inference Package) version 3.66. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle.
  • 9
    • 32544461121 scopus 로고    scopus 로고
    • An antiviral mechanism investigated with ribavirin as an RNA virus mutagen for foot-and-mouth disease virus
    • Gu C.J., Zheng C.Y., Zhang Q., Shi L.L., Li Y., and Qu S.F. An antiviral mechanism investigated with ribavirin as an RNA virus mutagen for foot-and-mouth disease virus. J. Biochem. Mol. Biol. 39 1 (2006) 9-15
    • (2006) J. Biochem. Mol. Biol. , vol.39 , Issue.1 , pp. 9-15
    • Gu, C.J.1    Zheng, C.Y.2    Zhang, Q.3    Shi, L.L.4    Li, Y.5    Qu, S.F.6
  • 10
    • 33947177012 scopus 로고    scopus 로고
    • Consistent change in the B-C loop of VP2 observed in foot-and-mouth disease virus from persistently infected cattle: implications for association with persistence
    • Horsington J., and Zhang Z. Consistent change in the B-C loop of VP2 observed in foot-and-mouth disease virus from persistently infected cattle: implications for association with persistence. Virus Res. 125 1 (2007) 114-118
    • (2007) Virus Res. , vol.125 , Issue.1 , pp. 114-118
    • Horsington, J.1    Zhang, Z.2
  • 11
    • 0037407859 scopus 로고    scopus 로고
    • From RNA to quasispecies: a DNA polymerase with proofreading activity is highly recommended for accurate assessment of viral diversity
    • Malet I., Belnard M., Agut H., and Cahour A. From RNA to quasispecies: a DNA polymerase with proofreading activity is highly recommended for accurate assessment of viral diversity. J. Virol. Methods 109 2 (2003) 161-170
    • (2003) J. Virol. Methods , vol.109 , Issue.2 , pp. 161-170
    • Malet, I.1    Belnard, M.2    Agut, H.3    Cahour, A.4
  • 12
    • 0005814023 scopus 로고
    • Mathematical model for studying genetic variation in terms of restriction endonucleases
    • Nei M., and Li W.H. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. U.S.A. 76 10 (1979) 5269-5273
    • (1979) Proc. Natl. Acad. Sci. U.S.A. , vol.76 , Issue.10 , pp. 5269-5273
    • Nei, M.1    Li, W.H.2
  • 13
    • 0034813056 scopus 로고    scopus 로고
    • Efficient virus extinction by combinations of a mutagen and antiviral inhibitors
    • Pariente N., Sierra S., Lowenstein P.R., and Domingo E. Efficient virus extinction by combinations of a mutagen and antiviral inhibitors. J. Virol. 75 20 (2001) 9723-9730
    • (2001) J. Virol. , vol.75 , Issue.20 , pp. 9723-9730
    • Pariente, N.1    Sierra, S.2    Lowenstein, P.R.3    Domingo, E.4
  • 14
    • 0031890130 scopus 로고    scopus 로고
    • Comparison of reverse transcription polymerase chain reaction, enzyme linked immunosorbent assay and virus isolation for the routine diagnosis of foot-and-mouth disease
    • Reid S.M., Forsyth M.A., Hutchings G.H., and Ferris N.P. Comparison of reverse transcription polymerase chain reaction, enzyme linked immunosorbent assay and virus isolation for the routine diagnosis of foot-and-mouth disease. J. Virol. Methods 70 2 (1998) 213-217
    • (1998) J. Virol. Methods , vol.70 , Issue.2 , pp. 213-217
    • Reid, S.M.1    Forsyth, M.A.2    Hutchings, G.H.3    Ferris, N.P.4
  • 15
    • 0032972599 scopus 로고    scopus 로고
    • DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis
    • Rozas J., and Rozas R. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15 2 (1999) 174-175
    • (1999) Bioinformatics , vol.15 , Issue.2 , pp. 174-175
    • Rozas, J.1    Rozas, R.2
  • 16
    • 0033850837 scopus 로고    scopus 로고
    • Response of foot-and-mouth disease virus to increased mutagenesis: influence of viral load and fitness in loss of infectivity
    • Sierra S., Davila M., Lowenstein P.R., and Domingo E. Response of foot-and-mouth disease virus to increased mutagenesis: influence of viral load and fitness in loss of infectivity. J. Virol. 74 18 (2000) 8316-8323
    • (2000) J. Virol. , vol.74 , Issue.18 , pp. 8316-8323
    • Sierra, S.1    Davila, M.2    Lowenstein, P.R.3    Domingo, E.4
  • 17
    • 0030683599 scopus 로고    scopus 로고
    • PAML: a program package for phylogenetic analysis by maximum likelihood
    • Yang Z. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13 5 (1997) 555-556
    • (1997) Comput. Appl. Biosci. , vol.13 , Issue.5 , pp. 555-556
    • Yang, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.