Custom assignment of MPI ranks for parallel multi-dimensional FFTs: Evaluation of BG/P versus BG/L

Proceedings of the 2008 International Symposium on Parallel and Distributed Processing with Applications, ISPA 2008

Volumn , Issue , 2008, Pages 271-283

  Jagode, Heike ^a   Hein, Joachim ^b  

^a UNIVERSITY OF TENNESSEE   (United States)

^b UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

COMPARE AND ANALYZE; FAST FOURIER TRANSFORMATIONS; MULTI-DIMENSIONAL DATUM; NETWORK CHARACTERISTICS; PERFORMANCE ANALYSIS; PERFORMANCE IMPROVEMENTS; SCIENTIFIC APPLICATIONS; TASK MAPPINGS; TWO-DIMENSIONAL; VIRTUAL PROCESSORS;

APPLICATIONS; DISTRIBUTED PARAMETER NETWORKS; FOURIER ANALYSIS; THREE DIMENSIONAL;

FAST FOURIER TRANSFORMS;

EID: 60649099369     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ISPA.2008.136     Document Type: Conference Paper

References (13)

1. M. Eleftheriou, et al, "A Volumetric FFT for Blue- Gene/L", in G. Goos, J. Hartmanis, J. van Leeuwen, editors, volume 2913 of Lecture Notes in Computer Science, page 194, Springer-Verlag, 2003.
2. M. Eleftheriou, et al., "Performance Measurements of the 3D FFT on the Blue Gene/L Supercomputer", J.C. Cunha and P.D. Medeiros (Eds.): Euro-Par 2005, LNCS 3648, page 795, 2005.
3. S. Alam, et al., "Performance Characterization of Molecular Dynamics Techniques for Biomolecular Simulations", PPOPP'06, New York City, New York, USA, 2006.
4. H. Jagode, "Fourier Transforms for the BlueGene/L Communication Network", MSc thesis, The University of Edinburgh, 2006,http://www.epcc.ed. ac.uk/msc/dissertations/2005-2006/
5. http://www.top500.org
6. Joachim Hein, Heike Jagode, Ulrich Sigrist, Alan Simpson, Arthur Trew, "Parallel 3D-FFTs for multi-core nodes on a mesh communication network", Paper presented at CUG 2008, Helsinki, Finland, May 5-8, 2008
7. FFTW Homepage, http://www.fftw.org
8. J. Lorenz, S. Kral, F. Franchetti, C.W. Ueberhuber., "Vectorization techniques for the Blue Gene/L double FPU", IBM Journal of Research and Development, Vol. 49, page 437, 2005
9. IBM BG team, "Overview of the IBM Blue Gene/P project", IBM Journal of Research and Development, Vol. 52, page 199, 2008.
10. N. R. Adiga, et al., "Blue Gene/L torus interconnection network", IBM Journal of Research and Development, Volume 49, page 265, 2005.
11. H. Jagode, et al., "Task placement of parallel multidimensional FFTs on a mesh communication network", University of Tennessee Knoxville, Technical Report No. ut-cs-08-613, 2008, http ://www.cs.utk.edu/library/2008. html
12. D. Kerbyson, et al., "Performance Modeling of the Blue Gene Architecture", IEEE International Symposium on Modern Computing (JVA'06), 2006.
13. C. P. Sosa, "IBM System Blue Gene Solution: Blue Gene/P Application Development", IBM Redbook, 2007,http ://www.redbooks.ibm. com/abstracts/sg247287.html