Gene expression analysis of terminal differentiation of human melanoma cells highlights global reductions in cell cycle-associated genes

Gene

Volumn 433, Issue 1-2, 2009, Pages 32-39

  Huynh, Kim Mai ^a   Kim, Gyoungmi ^a   Kim, Dong Joon ^b   Yang, Suk Jin ^b   Park, Seong min ^b   Yeom, Young Il ^b   Fisher, Paul B ^c   Kang, Dongchul ^a  

^a Hallym University   (South Korea)

^b Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^c VIRGINIA COMMONWEALTH UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Calpain 3; Interferon beta; Mezerein; Microarray; Mitosis; PKC

Indexed keywords

BETA INTERFERON; CALPAIN 3; COMPLEMENTARY DNA; MEZEREIN;

ARTICLE; CELL CYCLE ARREST; CELL DEATH; CELL DIFFERENTIATION; CELL MATURATION; CELL PROLIFERATION; CELL VIABILITY; CONTROLLED STUDY; DNA HYBRIDIZATION; DNA REPLICATION; ENZYME REGULATION; GENE CONTROL; GENE EXPRESSION; HUMAN; HUMAN CELL; MELANOMA CELL; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN EXPRESSION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

BLOTTING, NORTHERN; BLOTTING, WESTERN; CELL DIFFERENTIATION; CELL LINE, TUMOR; GENE EXPRESSION PROFILING; GENES, CDC; HUMANS; MELANOMA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION;

EID: 59849114874     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2008.11.013     Document Type: Article

References (38)

1. Costa R.H. FoxM1 dances with mitosis. Nat. Cell Biol. 7 (2005) 108-110
2. de Veer M.J., et al. Functional classification of interferon-stimulated genes identified using microarrays. J. Leukoc. Biol. 69 (2001) 912-920
3. Delmas C., Aragou N., Poussard S., Cottin P., Darbon J.M., and Manenti S. MAP kinase-dependent degradation of p27Kip1 by calpains in choroidal melanoma cells. Requirement of p27Kip1 nuclear export. J. Biol. Chem. 278 (2003) 12443-12451
4. Fisher P.B. Is mda-7/IL-24 a "magic bullet" for cancer?. Cancer Res. 65 (2005) 10128-10138
5. Fisher P.B., and Grant S. Effects of interferon on differentiation of normal and tumor cells. Pharmacol. Ther. 27 (1985) 143-166
6. Fisher P.B., Prignoli D.R., Hermo Jr. H., Weinstein I.B., and Pestka S. Effects of combined treatment with interferon and mezerein on melanogenesis and growth in human melanoma cells. J. Interferon. Res. 5 (1985) 11-22
7. Hass R. Retrodifferentiation-an alternative biological pathway in human leukemia cells. Eur. J. Cell Biol. 58 (1992) 1-11
8. Hass R. Retrodifferentiation and cell death. Crit. Rev. Oncog. 5 (1994) 359-371
9. Huang F., Adelman J., Jiang H., Goldstein N.I., and Fisher P.B. Differentiation induction subtraction hybridization (DISH): a strategy for cloning genes displaying differential expression during growth arrest and terminal differentiation. Gene 236 (1999) 125-131
10. Huang F., Adelman J., Jiang H., Goldstein N.I., and Fisher P.B. Identification and temporal expression pattern of genes modulated during irreversible growth arrest and terminal differentiation in human melanoma cells. Oncogene 18 (1999) 3546-3552
11. Jiang H., and Fisher P.B. Use a sensitive and efficient subtraction hybridization protocol for the identification of genes differentially regulated during the induction of differentiation in human melanoma cells. Mol. Cell. Differ. 1 (1993) 285-299
12. Jiang H., Kang D.C., Alexandre D., and Fisher P.B. RaSH, a rapid subtraction hybridization approach for identifying and cloning differentially expressed genes. Proc. Natl. Acad. Sci. U S A 97 (2000) 12684-12689
13. Jiang H., et al. The melanoma differentiation-associated gene mda-6, which encodes the cyclin-dependent kinase inhibitor p21, is differentially expressed during growth, differentiation and progression in human melanoma cells. Oncogene 10 (1995) 1855-1864
14. Juan H.F., et al. Biomic study of human myeloid leukemia cells differentiation to macrophages using DNA array, proteomic, and bioinformatic analytical methods. Electrophoresis 23 (2002) 2490-2504
15. Kang D.C., et al. Expression analysis and genomic characterization of human melanoma differentiation associated gene-5, mda-5: a novel type I interferon-responsive apoptosis-inducing gene. Oncogene 23 (2004) 1789-1800
16. Kang D.C., Gopalkrishnan R.V., Wu Q., Jankowsky E., Pyle A.M., and Fisher P.B. mda-5: an interferon-inducible putative RNA helicase with double-stranded RNA-dependent ATPase activity and melanoma growth-suppressive properties. Proc. Natl. Acad. Sci. U. S. A. 99 (2002) 637-642
17. Kim G., Kim D., Lee S., Yeom Y., and Kang D. Gene expression profile during mezerein-induced reversible differentiation of human melanoma cells. Kor. J. Gerontol. 16 (2006) 201-210
18. Klein-Szanto A.J., Major S.K., and Slaga T.J. Induction of dark keratinocytes by 12-O-tetradecanoylphorbol-13-acetate and mezerein as an indicator of tumor-promoting efficiency. Carcinogenesis 1 (1980) 399-406
19. Laoukili J., et al. FoxM1 is required for execution of the mitotic programme and chromosome stability. Nat. Cell Biol. 7 (2005) 126-136
20. Lee H.S., et al. Novel candidate targets of Wnt/beta-catenin signaling in hepatoma cells. Life Sci. 80 (2007) 690-698
21. Leszczyniecka M., Roberts T., Dent P., Grant S., and Fisher P.B. Differentiation therapy of human cancer: basic science and clinical applications. Pharmacol. Ther. 90 (2001) 105-156
22. Leszczyniecka M., Su Z.Z., Kang D.C., Sarkar D., and Fisher P.B. Expression regulation and genomic organization of human polynucleotide phosphorylase, hPNPase(old-35), a Type I interferon inducible early response gene. Gene 316 (2003) 143-156
23. Miyake R., Tanaka Y., Tsuda T., Kaibuchi K., Kikkawa U., and Nishizuka Y. Activation of protein kinase C by non-phorbol tumor promoter, mezerein. Biochem. Biophys. Res. Commun. 121 (1984) 649-656
24. Molven A., Houge G., and Berger R. Chromosomal assignment of the human gene encoding the Fos-related antigen-2 (FRA2) to chromosome 2p22-p23. Genomics 38 (1996) 72-75
25. Morin M.J., Kreutter D., Rasmussen H., and Sartorelli A.C. Disparate effects of activators of protein kinase C on HL-60 promyelocytic leukemia cell differentiation. J. Biol. Chem. 262 (1987) 11758-11763
26. Mufson R.A., Fischer S.M., Verma A.K., Gleason G.L., Slaga T.J., and Boutwell R.K. Effects of 12-O-tetradecanoylphorbol-13-acetate and mezerein on epidermal ornithine decarboxylase activity, isoproterenol-stimulated levels of cyclic adenosine 3′:5′-monophosphate, and induction of mouse skin tumors in vivo. Cancer Res. 39 (1979) 4791-4795
27. Rovera G., O'Brien T.G., and Diamond L. Induction of differentiation in human promyelocytic leukemia cells by tumor promoters. Science 204 (1979) 868-870
28. Sharma S.C., and Richards J.S. Regulation of AP1 (Jun/Fos) factor expression and activation in ovarian granulosa cells. Relation of JunD and Fra2 to terminal differentiation. J. Biol. Chem. 275 (2000) 33718-33728
29. Spira A.I., and Carducci M.A. Differentiation therapy. Curr. Opin. Pharmacol. 3 (2003) 338-343
30. Staudt, M.R., DePass, A.L., Sarkar, D., Fisher, P.B., 2009. Model cell culture system for defining the molecular and biochemical events mediating terminal differentiation of human melanoma cells. J. Cell Physiol. 218, 304-314.
31. Stetson D.B., and Medzhitov R. Type I interferons in host defense. Immunity 25 (2006) 373-381
32. Tusher V.G., Tibshirani R., and Chu G. Significance Analysis of Microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. U S A 98 (2001) 5116-5121
33. Vertegaal A.C., Kuiperij H.B., Yamaoka S., Courtois G., van der Eb A.J., and Zantema A. Protein kinase C-alpha is an upstream activator of the IkappaB kinase complex in the TPA signal transduction pathway to NF-kappaB in U2OS cells. Cell Signal. 12 (2000) 759-768
34. Vannucchi S., et al. Perspectives in biomolecular therapeutic intervention in cancer: from the early to the new strategies with type I interferons. Curr. Med. Chem. 14 (2007) 667-679
35. Wang I.C., et al. Forkhead box M1 regulates the transcriptional network of genes essential for mitotic progression and genes encoding the SCF (Skp2-Cks1) ubiquitin ligase. Mol. Cell. Biol. 25 (2005) 10875-10894
36. Weeraratna A.T., et al. Generation and analysis of melanoma SAGE libraries: SAGE advice on the melanoma transcriptome. Oncogene 23 (2004) 2264-2274
37. Wierstra I., and Alves J. FOXM1, a typical proliferation-associated transcription factor. Biol. Chem. 388 (2007) 1257-1274
38. Zheng X., et al. Gene expression of TPA induced differentiation in HL-60 cells by DNA microarray analysis. Nucleic Acids Res. 30 (2002) 4489-4499