-
1
-
-
0030949953
-
Evolutionary comparisons of RecA-like proteins across all major kingdoms of living organisms
-
Brendel, V., Brocchieri, L., Sandler, S.J., Clark, A.J. and Karlin, S. (1997) Evolutionary comparisons of RecA-like proteins across all major kingdoms of living organisms. J. Mol. Evol. 44, 528-541
-
(1997)
J. Mol. Evol
, vol.44
, pp. 528-541
-
-
Brendel, V.1
Brocchieri, L.2
Sandler, S.J.3
Clark, A.J.4
Karlin, S.5
-
2
-
-
0035997347
-
The bacterial RecA protein and the recombinational DNA repair of stalled replication forks
-
Lusetti, S.L. and Cox, M.M. (2002) The bacterial RecA protein and the recombinational DNA repair of stalled replication forks. Annu. Rev. Biochem. 71, 71-100
-
(2002)
Annu. Rev. Biochem
, vol.71
, pp. 71-100
-
-
Lusetti, S.L.1
Cox, M.M.2
-
3
-
-
0000880652
-
Isolation and characterization of recombination-deficient mutants of Escherichia coli K-12
-
Clark, A.J. and Margulies, A.D. (1965) Isolation and characterization of recombination-deficient mutants of Escherichia coli K-12. Proc. Natl. Acad. Sci. U.S.A. 53, 451-459
-
(1965)
Proc. Natl. Acad. Sci. U.S.A
, vol.53
, pp. 451-459
-
-
Clark, A.J.1
Margulies, A.D.2
-
4
-
-
0025909496
-
Production of triple-stranded recombination intermediates by RecA protein, in vitro
-
Rao, B.J., Jwang, B. and Dutreix, M. (1991) Production of triple-stranded recombination intermediates by RecA protein, in vitro. Biochimie 73, 363-370
-
(1991)
Biochimie
, vol.73
, pp. 363-370
-
-
Rao, B.J.1
Jwang, B.2
Dutreix, M.3
-
5
-
-
0022689021
-
Homologous recombination in Escherichia coli: Dependence on substrate length and homology
-
Shen, P. and Huang, H.V. (1986) Homologous recombination in Escherichia coli: dependence on substrate length and homology. Genetics 112, 441-457
-
(1986)
Genetics
, vol.112
, pp. 441-457
-
-
Shen, P.1
Huang, H.V.2
-
6
-
-
0025891414
-
Biochemistry of genetic recombination: Energetics and mechanism of DNA strand exchange
-
Kowalczykowski, S.C. (1991) Biochemistry of genetic recombination: energetics and mechanism of DNA strand exchange. Annu. Rev. Biophys. Biophys. Chem. 20, 539-575
-
(1991)
Annu. Rev. Biophys. Biophys. Chem
, vol.20
, pp. 539-575
-
-
Kowalczykowski, S.C.1
-
7
-
-
0026751113
-
Rad51 protein involved in repair and recombination in S. cerevisiae is a RecA-like protein
-
Shinohara, A., Ogawa, H. and Ogawa, T. (1992) Rad51 protein involved in repair and recombination in S. cerevisiae is a RecA-like protein. Cell 69, 457-470
-
(1992)
Cell
, vol.69
, pp. 457-470
-
-
Shinohara, A.1
Ogawa, H.2
Ogawa, T.3
-
8
-
-
0032518657
-
Rad51-deficient vertebrate cells accumulate chromosomal breaks prior to cell death
-
Sonoda, E., Sasaki, M.S., Buerstedde, J.M., Bezzubova, O., Shinohara, A., Ogawa, H., Takata, M., Yamaguchi-Iwai, Y. and Takeda, S. (1998) Rad51-deficient vertebrate cells accumulate chromosomal breaks prior to cell death. EMBO J. 17, 598-608
-
(1998)
EMBO J
, vol.17
, pp. 598-608
-
-
Sonoda, E.1
Sasaki, M.S.2
Buerstedde, J.M.3
Bezzubova, O.4
Shinohara, A.5
Ogawa, H.6
Takata, M.7
Yamaguchi-Iwai, Y.8
Takeda, S.9
-
9
-
-
0027167689
-
Similarity of the yeast RAD51 filament to the bacterial RecA filament
-
Ogawa, T., Yu, X., Shinohara, A. and Egelman, E.H. (1993) Similarity of the yeast RAD51 filament to the bacterial RecA filament. Science 259, 1896-1899
-
(1993)
Science
, vol.259
, pp. 1896-1899
-
-
Ogawa, T.1
Yu, X.2
Shinohara, A.3
Egelman, E.H.4
-
10
-
-
0029112483
-
DNA strand exchange mediated by a RAD51-ssDNA nucleoprotein filament with polarity opposite to that of RecA
-
Sung, P. and Robberson, D.L. (1995) DNA strand exchange mediated by a RAD51-ssDNA nucleoprotein filament with polarity opposite to that of RecA. Cell 82, 453-461
-
(1995)
Cell
, vol.82
, pp. 453-461
-
-
Sung, P.1
Robberson, D.L.2
-
11
-
-
0030475011
-
A possible role of the C-terminal domain of the RecA protein: A gateway model for double-stranded DNA binding
-
Kurumizaka, H., Aihara, H., Ikawa, S., Kashima, T., Bazemore, L.R., Kawasaki, K., Sarai, A., Radding, C.M. and Shibata, T. (1996) A possible role of the C-terminal domain of the RecA protein: a gateway model for double-stranded DNA binding. J. Biol. Chem. 271, 33515-33524
-
(1996)
J. Biol. Chem
, vol.271
, pp. 33515-33524
-
-
Kurumizaka, H.1
Aihara, H.2
Ikawa, S.3
Kashima, T.4
Bazemore, L.R.5
Kawasaki, K.6
Sarai, A.7
Radding, C.M.8
Shibata, T.9
-
12
-
-
0033538424
-
The N-terminal domain of the human Rad51 protein binds DNA: Structure and a DNA binding surface as revealed by NMR
-
Aihara, H., Ito, Y., Kurumizaka, H., Yokoyama, S. and Shibata, T. (1999) The N-terminal domain of the human Rad51 protein binds DNA: structure and a DNA binding surface as revealed by NMR. J. Mol. Biol. 290, 495-504
-
(1999)
J. Mol. Biol
, vol.290
, pp. 495-504
-
-
Aihara, H.1
Ito, Y.2
Kurumizaka, H.3
Yokoyama, S.4
Shibata, T.5
-
13
-
-
0029946142
-
recA-like genes from three archaean species with putative protein products similar to Rad51 and Dmc1 proteins of the yeast Saccharomyces cerevisiae
-
Sandler, S.J., Satin, L.H., Samra, H.S. and Clark, A.J. (1996) recA-like genes from three archaean species with putative protein products similar to Rad51 and Dmc1 proteins of the yeast Saccharomyces cerevisiae. Nucleic Acids Res. 24, 2125-2132
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 2125-2132
-
-
Sandler, S.J.1
Satin, L.H.2
Samra, H.S.3
Clark, A.J.4
-
14
-
-
0031034269
-
Construction and analysis of a recombination-deficient (radA) mutant of Haloferax volcanii
-
Woods, W.G. and Dyall-Smith, M.L. (1997) Construction and analysis of a recombination-deficient (radA) mutant of Haloferax volcanii. Mol. Microbiol. 23, 791-797
-
(1997)
Mol. Microbiol
, vol.23
, pp. 791-797
-
-
Woods, W.G.1
Dyall-Smith, M.L.2
-
15
-
-
0042738069
-
Full-length archaeal Rad51 structure and mutants: Mechanisms for RAD51 assembly and control by BRCA2
-
Shin, D.S., Pellegrini, L., Daniels, D.S., Yelent, B., Craig, L., Bates, D., Yu, D.S., Shivji, M.K., Hitomi, C., Arvai, A.S. et al. (2003) Full-length archaeal Rad51 structure and mutants: mechanisms for RAD51 assembly and control by BRCA2. EMBO J. 22, 4566-4576
-
(2003)
EMBO J
, vol.22
, pp. 4566-4576
-
-
Shin, D.S.1
Pellegrini, L.2
Daniels, D.S.3
Yelent, B.4
Craig, L.5
Bates, D.6
Yu, D.S.7
Shivji, M.K.8
Hitomi, C.9
Arvai, A.S.10
-
16
-
-
0034721873
-
Domain analysis of an archaeal RadA protein for the strand exchange activity
-
Komori, K., Miyata, T., Daiyasu, H., Toh, H., Shinagawa, H. and Ishino, Y. (2000) Domain analysis of an archaeal RadA protein for the strand exchange activity. J. Biol. Chem. 275, 33791-33797
-
(2000)
J. Biol. Chem
, vol.275
, pp. 33791-33797
-
-
Komori, K.1
Miyata, T.2
Daiyasu, H.3
Toh, H.4
Shinagawa, H.5
Ishino, Y.6
-
17
-
-
0032079749
-
RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange
-
Seitz, E.M., Brockman, J.P., Sandler, S.J., Clark, A.J. and Kowalczykowski, S.C. (1998) RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange. Genes Dev. 12, 1248-1253
-
(1998)
Genes Dev
, vol.12
, pp. 1248-1253
-
-
Seitz, E.M.1
Brockman, J.P.2
Sandler, S.J.3
Clark, A.J.4
Kowalczykowski, S.C.5
-
18
-
-
38049046713
-
Right or left turn? RecA family protein filaments promote homologous recombination through clockwise axial rotation
-
Wang, T.F., Chen, L.T. and Wang, A.H. (2008) Right or left turn? RecA family protein filaments promote homologous recombination through clockwise axial rotation. BioEssays 30, 48-56
-
(2008)
BioEssays
, vol.30
, pp. 48-56
-
-
Wang, T.F.1
Chen, L.T.2
Wang, A.H.3
-
19
-
-
34247869930
-
Crystal structure of the left-handed archaeal RadA helical filament: Identification of a functional motif for controlling quaternary structures and enzymatic functions of RecA family proteins
-
Chen, L.T., Ko, T.P., Chang, Y.C., Lin, K.A., Chang, C.S., Wang, A.H. and Wang, T.F. (2007) Crystal structure of the left-handed archaeal RadA helical filament: identification of a functional motif for controlling quaternary structures and enzymatic functions of RecA family proteins. Nucleic Acids Res. 35, 1787-1801
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 1787-1801
-
-
Chen, L.T.1
Ko, T.P.2
Chang, Y.C.3
Lin, K.A.4
Chang, C.S.5
Wang, A.H.6
Wang, T.F.7
-
20
-
-
14844355639
-
Conformational flexibility revealed by the crystal structure of a crenarchaeal RadA
-
Ariza, A., Richard, D.J., White, M.F. and Bond, C.S. (2005) Conformational flexibility revealed by the crystal structure of a crenarchaeal RadA. Nucleic Acids Res. 33, 1465-1473
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 1465-1473
-
-
Ariza, A.1
Richard, D.J.2
White, M.F.3
Bond, C.S.4
-
21
-
-
0036947250
-
Role for radA/sms in recombination intermediate processing in Escherichia coli
-
Beam, C.E., Saveson, C.J. and Lovett, S.T. (2002) Role for radA/sms in recombination intermediate processing in Escherichia coli. J. Bacteriol. 184, 6836-6844
-
(2002)
J. Bacteriol
, vol.184
, pp. 6836-6844
-
-
Beam, C.E.1
Saveson, C.J.2
Lovett, S.T.3
-
22
-
-
0033975419
-
The bacterial replicative helicase DnaB evolved from a RecA duplication
-
Leipe, D.D., Aravind, L., Grishin, N.V. and Koonin, E.V. (2000) The bacterial replicative helicase DnaB evolved from a RecA duplication. Genome Res. 10, 5-16
-
(2000)
Genome Res
, vol.10
, pp. 5-16
-
-
Leipe, D.D.1
Aravind, L.2
Grishin, N.V.3
Koonin, E.V.4
-
23
-
-
33750946025
-
Replication arrest-stimulated recombination: Dependence on the RecA paralog, RadA/Sms and translesion polymerase, DinB
-
Lovett, S.T. (2006) Replication arrest-stimulated recombination: dependence on the RecA paralog, RadA/Sms and translesion polymerase, DinB. DNA Repair 5, 1421-1427
-
(2006)
DNA Repair
, vol.5
, pp. 1421-1427
-
-
Lovett, S.T.1
-
24
-
-
0030995362
-
Yeast Rad55 and Rad57 proteins form a heterodimer that functions with replication protein A to promote DNA strand exchange by Rad51 recombinase
-
Sung, P. (1997) Yeast Rad55 and Rad57 proteins form a heterodimer that functions with replication protein A to promote DNA strand exchange by Rad51 recombinase. Genes Dev. 11, 1111-1121
-
(1997)
Genes Dev
, vol.11
, pp. 1111-1121
-
-
Sung, P.1
-
25
-
-
0037124355
-
Mutations in yeast Rad51 that partially bypass the requirement for Rad55 and Rad57 in DNA repair by increasing the stability of Rad51-DNA complexes
-
Fortin, G.S. and Symington, L.S. (2002) Mutations in yeast Rad51 that partially bypass the requirement for Rad55 and Rad57 in DNA repair by increasing the stability of Rad51-DNA complexes. EMBO J. 21, 3160-3170
-
(2002)
EMBO J
, vol.21
, pp. 3160-3170
-
-
Fortin, G.S.1
Symington, L.S.2
-
26
-
-
13944268723
-
The RAD51 gene family, genetic instability and cancer
-
Thacker, J. (2005) The RAD51 gene family, genetic instability and cancer. Cancer Lett. 219, 125-135
-
(2005)
Cancer Lett
, vol.219
, pp. 125-135
-
-
Thacker, J.1
-
27
-
-
0345734278
-
Homologous recombination deficiency leads to profound genetic instability in cells derived from Xrcc2-knockout mice
-
Deans, B., Griffin, C.S., O'Regan, P., Jasin, M. and Thacker, J. (2003) Homologous recombination deficiency leads to profound genetic instability in cells derived from Xrcc2-knockout mice. Cancer Res. 63, 8181-8187
-
(2003)
Cancer Res
, vol.63
, pp. 8181-8187
-
-
Deans, B.1
Griffin, C.S.2
O'Regan, P.3
Jasin, M.4
Thacker, J.5
-
28
-
-
0033846527
-
The Rad51 paralog Rad51B promotes homologous recombinational repair
-
Takata, M., Sasaki, M.S., Sonoda, E., Fukushima, T., Morrison, C., Albala, J.S., Swagemakers, S.M., Kanaar, R., Thompson, L.H. and Takeda, S. (2000) The Rad51 paralog Rad51B promotes homologous recombinational repair. Mol. Cell. Biol. 20, 6476-6482
-
(2000)
Mol. Cell. Biol
, vol.20
, pp. 6476-6482
-
-
Takata, M.1
Sasaki, M.S.2
Sonoda, E.3
Fukushima, T.4
Morrison, C.5
Albala, J.S.6
Swagemakers, S.M.7
Kanaar, R.8
Thompson, L.H.9
Takeda, S.10
-
29
-
-
0035083172
-
Chromosome instability and defective recombinational repair in knockout mutants of the five Rad51 paralogs
-
Takata, M., Sasaki, M.S., Tachiiri, S., Fukushima, T., Sonoda, E., Schild, D., Thompson, L.H. and Takeda, S. (2001) Chromosome instability and defective recombinational repair in knockout mutants of the five Rad51 paralogs. Mol. Cell. Biol. 21, 2858-2866
-
(2001)
Mol. Cell. Biol
, vol.21
, pp. 2858-2866
-
-
Takata, M.1
Sasaki, M.S.2
Tachiiri, S.3
Fukushima, T.4
Sonoda, E.5
Schild, D.6
Thompson, L.H.7
Takeda, S.8
-
30
-
-
34547176640
-
Replication blocking lesions present a unique substrate for homologous recombination
-
Ward, J.D., Barber, L.J., Petalcorin, M.I., Yanowitz, J. and Boulton, S.J. (2007) Replication blocking lesions present a unique substrate for homologous recombination. EMBO J. 26, 3384-3396
-
(2007)
EMBO J
, vol.26
, pp. 3384-3396
-
-
Ward, J.D.1
Barber, L.J.2
Petalcorin, M.I.3
Yanowitz, J.4
Boulton, S.J.5
-
31
-
-
52049104500
-
Genome integrity is regulated by the Caenorhabditis elegans Rad51D homolog rfs-1
-
Yanowitz, J.L. (2008) Genome integrity is regulated by the Caenorhabditis elegans Rad51D homolog rfs-1. Genetics 179, 249-262
-
(2008)
Genetics
, vol.179
, pp. 249-262
-
-
Yanowitz, J.L.1
-
32
-
-
0032942273
-
Diversity of radA genes from cultured and uncultured Archaea: Comparative analysis of putative RadA proteins and their use as a phylogenetic marker
-
Sandler, S.J., Hugenholtz, P., Schleper, C., DeLong, E.F., Pace, N.R. and Clark, A.J. (1999) Diversity of radA genes from cultured and uncultured Archaea: comparative analysis of putative RadA proteins and their use as a phylogenetic marker. J. Bacteriol. 181, 907-915
-
(1999)
J. Bacteriol
, vol.181
, pp. 907-915
-
-
Sandler, S.J.1
Hugenholtz, P.2
Schleper, C.3
DeLong, E.F.4
Pace, N.R.5
Clark, A.J.6
-
33
-
-
0034721803
-
Both RadA and RadB are involved in homologous recombination in Pyrococcus furiosus
-
Komori, K., Miyata, T., DiRuggiero, J., Holley-Shanks, R., Hayashi, I., Cann, I.K., Mayanagi, K., Shinagawa, H. and Ishino, Y. (2000) Both RadA and RadB are involved in homologous recombination in Pyrococcus furiosus. J. Biol. Chem. 275, 33782-33790
-
(2000)
J. Biol. Chem
, vol.275
, pp. 33782-33790
-
-
Komori, K.1
Miyata, T.2
DiRuggiero, J.3
Holley-Shanks, R.4
Hayashi, I.5
Cann, I.K.6
Mayanagi, K.7
Shinagawa, H.8
Ishino, Y.9
-
34
-
-
33645103786
-
Interactions of RadB, a DNA repair protein in archaea, with DNA and ATP
-
Guy, C.P., Haldenby, S., Brindley, A., Walsh, D.A., Briggs, G.S., Warren, M.J., Allers, T. and Bolt, E.L. (2006) Interactions of RadB, a DNA repair protein in archaea, with DNA and ATP. J. Mol. Biol. 358, 46-56
-
(2006)
J. Mol. Biol
, vol.358
, pp. 46-56
-
-
Guy, C.P.1
Haldenby, S.2
Brindley, A.3
Walsh, D.A.4
Briggs, G.S.5
Warren, M.J.6
Allers, T.7
Bolt, E.L.8
-
35
-
-
0033572698
-
Specific interaction between DNA polymerase II (PolD) and RadB, a Rad51/Dmc1 homolog
-
Nucleic Acids Res
-
Hayashi, I., Morikawa, K. and Ishino, Y. (1999) Specific interaction between DNA polymerase II (PolD) and RadB, a Rad51/Dmc1 homolog, in Pyrococcus furiosus. Nucleic Acids Res. 27, 4695-4702
-
(1999)
Pyrococcus furiosus
, vol.27
, pp. 4695-4702
-
-
Hayashi, I.1
Morikawa, K.2
Ishino, Y.3
-
36
-
-
2342597828
-
Characterization of the 3′ exonuclease subunit DP1 of Methanococcus jannaschii replicative DNA polymerase D
-
Jokela, M., Eskelinen, A., Pospiech, H., Rouvinen, J. and Syvaoja, J.E. (2004) Characterization of the 3′ exonuclease subunit DP1 of Methanococcus jannaschii replicative DNA polymerase D. Nucleic Acids Res. 32, 2430-2440
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 2430-2440
-
-
Jokela, M.1
Eskelinen, A.2
Pospiech, H.3
Rouvinen, J.4
Syvaoja, J.E.5
-
37
-
-
20444447742
-
Structure of RadB recombinase from a hyperthermophilic archaeon, Thermococcus kodakaraensis KOD1: An implication for the formation of a near-7-fold helical assembly
-
Akiba, T., Ishii, N., Rashid, N., Morikawa, M., Imanaka, T. and Harata, K. (2005) Structure of RadB recombinase from a hyperthermophilic archaeon, Thermococcus kodakaraensis KOD1: an implication for the formation of a near-7-fold helical assembly. Nucleic Acids Res. 33, 3412-3423
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 3412-3423
-
-
Akiba, T.1
Ishii, N.2
Rashid, N.3
Morikawa, M.4
Imanaka, T.5
Harata, K.6
-
38
-
-
0344321891
-
Origin and evolution of circadian clock genes in prokaryotes
-
Dvornyk, V., Vinogradova, O. and Nevo, E. (2003) Origin and evolution of circadian clock genes in prokaryotes. Proc. Natl. Acad. Sci. U.S.A. 100, 2495-2500
-
(2003)
Proc. Natl. Acad. Sci. U.S.A
, vol.100
, pp. 2495-2500
-
-
Dvornyk, V.1
Vinogradova, O.2
Nevo, E.3
-
39
-
-
38049068811
-
The in vitro activity of a Rad55 homologue from Sulfolobus tokodaii, a candidate mediator in RadA-catalyzed homologous recombination
-
Sheng, D., Zhu, S., Wei, T., Ni, J. and Shen, Y. (2008) The in vitro activity of a Rad55 homologue from Sulfolobus tokodaii, a candidate mediator in RadA-catalyzed homologous recombination. Extremophiles 12, 147-157
-
(2008)
Extremophiles
, vol.12
, pp. 147-157
-
-
Sheng, D.1
Zhu, S.2
Wei, T.3
Ni, J.4
Shen, Y.5
-
40
-
-
26244442261
-
DNA damage detection by an archaeal single-stranded DNA-binding protein
-
Cubeddu, L. and White, M.F. (2005) DNA damage detection by an archaeal single-stranded DNA-binding protein. J. Mol. Biol. 353, 507-516
-
(2005)
J. Mol. Biol
, vol.353
, pp. 507-516
-
-
Cubeddu, L.1
White, M.F.2
-
41
-
-
33846190584
-
CC1, a novel crenarchaeal DNA binding protein
-
Luo, X., Schwarz-Linek, U., Botting, C.H., Hensel, R., Siebers, B. and White, M.F. (2007) CC1, a novel crenarchaeal DNA binding protein. J. Bacteriol. 189, 403-409
-
(2007)
J. Bacteriol
, vol.189
, pp. 403-409
-
-
Luo, X.1
Schwarz-Linek, U.2
Botting, C.H.3
Hensel, R.4
Siebers, B.5
White, M.F.6
-
42
-
-
49449091154
-
RadC, a misleading name?
-
Attaiech, L., Granadel, C., Claverys, J.P. and Martin, B. (2008) RadC, a misleading name? J. Bacteriol. 190, 5729-5732
-
(2008)
J. Bacteriol
, vol.190
, pp. 5729-5732
-
-
Attaiech, L.1
Granadel, C.2
Claverys, J.P.3
Martin, B.4
|