-
1
-
-
0032429548
-
A complete full-length non-LTR retrotransposon, BMC1, on the W chromosome of the silkworm, Bombyx mori
-
Abe H., Ohbayashi F., Shimada T., Sugasaki T., Kawai S., and Oshiki T. A complete full-length non-LTR retrotransposon, BMC1, on the W chromosome of the silkworm, Bombyx mori. Genes Genet. Syst. 73 (1998) 353-358
-
(1998)
Genes Genet. Syst.
, vol.73
, pp. 353-358
-
-
Abe, H.1
Ohbayashi, F.2
Shimada, T.3
Sugasaki, T.4
Kawai, S.5
Oshiki, T.6
-
2
-
-
0035053292
-
Two novel Pao-like retrotransposons (Kamikaze and Yamato) from the silkworm species Bombyx mori and B. mandarina: common structural features of Pao-like elements
-
Abe H., Ohbayashi F., Sugasaki T., Kanehara M., Terada T., Shimada T., Kawai S., Mita K., Kanamori Y., Yamamoto M.T., and Oshiki T. Two novel Pao-like retrotransposons (Kamikaze and Yamato) from the silkworm species Bombyx mori and B. mandarina: common structural features of Pao-like elements. Mol. Genet. Genomics 265 (2001) 375-385
-
(2001)
Mol. Genet. Genomics
, vol.265
, pp. 375-385
-
-
Abe, H.1
Ohbayashi, F.2
Sugasaki, T.3
Kanehara, M.4
Terada, T.5
Shimada, T.6
Kawai, S.7
Mita, K.8
Kanamori, Y.9
Yamamoto, M.T.10
Oshiki, T.11
-
3
-
-
0035984497
-
Nested retrotransposons on the W chromosome of the wild silkworm Bombyx mandarina
-
Abe H., Sugasaki T., Terada T., Kanehara M., Ohbayashi F., Shimada T., Kawai S., Mita K., and Oshiki T. Nested retrotransposons on the W chromosome of the wild silkworm Bombyx mandarina. Insect Mol. Biol. 11 (2002) 307-314
-
(2002)
Insect Mol. Biol.
, vol.11
, pp. 307-314
-
-
Abe, H.1
Sugasaki, T.2
Terada, T.3
Kanehara, M.4
Ohbayashi, F.5
Shimada, T.6
Kawai, S.7
Mita, K.8
Oshiki, T.9
-
4
-
-
0022446806
-
A highly reiterated family of transcribed oligo(A)-terminated, interspersed DNA elements in the genome of Bombyx mori
-
Adams D.S., Eickbush T.H., Herrera R.J., and Lizardi P.M. A highly reiterated family of transcribed oligo(A)-terminated, interspersed DNA elements in the genome of Bombyx mori. J. Mol. Biol. 187 (1986) 465-478
-
(1986)
J. Mol. Biol.
, vol.187
, pp. 465-478
-
-
Adams, D.S.1
Eickbush, T.H.2
Herrera, R.J.3
Lizardi, P.M.4
-
5
-
-
17144380460
-
Functional roles of 3′-terminal structures of template RNA during in vivo retrotransposition of non-LTR retrotransposon, R1Bm
-
Anzai T., Osanai M., Hamada M., and Fujiwara H. Functional roles of 3′-terminal structures of template RNA during in vivo retrotransposition of non-LTR retrotransposon, R1Bm. Nucleic Acids Res. 33 (2005) 1993-2002
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 1993-2002
-
-
Anzai, T.1
Osanai, M.2
Hamada, M.3
Fujiwara, H.4
-
6
-
-
33646928347
-
A distal enhancer and an ultraconserved exon are derived from a novel retroposon
-
Bejerano G., Lowe C.B., Ahituv N., King B., Siepel A., Salama S.R., Rubin E.M., Kent W.J., and Haussler D. A distal enhancer and an ultraconserved exon are derived from a novel retroposon. Nature 441 (2006) 87-90
-
(2006)
Nature
, vol.441
, pp. 87-90
-
-
Bejerano, G.1
Lowe, C.B.2
Ahituv, N.3
King, B.4
Siepel, A.5
Salama, S.R.6
Rubin, E.M.7
Kent, W.J.8
Haussler, D.9
-
7
-
-
33847749916
-
Recurrent insertion and duplication generate networks of transposable element sequences in the Drosophila melanogaster genome
-
Bergman C.M., Quesneville H., Anxolabehere D., and Ashburner M. Recurrent insertion and duplication generate networks of transposable element sequences in the Drosophila melanogaster genome. Genome Biol. 7 (2006) R112
-
(2006)
Genome Biol.
, vol.7
-
-
Bergman, C.M.1
Quesneville, H.2
Anxolabehere, D.3
Ashburner, M.4
-
8
-
-
0242666320
-
Non-LTR retrotransposons in the African malaria mosquito, Anopheles gambiae: unprecedented diversity and evidence of recent activity
-
Biedler J., and Tu Z. Non-LTR retrotransposons in the African malaria mosquito, Anopheles gambiae: unprecedented diversity and evidence of recent activity. Mol. Biol. Evol. 20 (2003) 1811-1825
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 1811-1825
-
-
Biedler, J.1
Tu, Z.2
-
9
-
-
0023351699
-
The site-specific ribosomal insertion element type II of Bombyx mori (R2Bm) contains the coding sequence for a reverse transcriptase-like enzyme
-
Burke W.D., Calalang C.C., and Eickbush T.H. The site-specific ribosomal insertion element type II of Bombyx mori (R2Bm) contains the coding sequence for a reverse transcriptase-like enzyme. Mol. Cell. Biol. 7 (1987) 2221-2230
-
(1987)
Mol. Cell. Biol.
, vol.7
, pp. 2221-2230
-
-
Burke, W.D.1
Calalang, C.C.2
Eickbush, T.H.3
-
10
-
-
0032955930
-
The domain structure and retrotransposition mechanism of R2 elements are conserved throughout arthropods
-
Burke W.D., Malik H.S., Jones J.P., and Eickbush T.H. The domain structure and retrotransposition mechanism of R2 elements are conserved throughout arthropods. Mol. Biol. Evol. 16 (1999) 502-511
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 502-511
-
-
Burke, W.D.1
Malik, H.S.2
Jones, J.P.3
Eickbush, T.H.4
-
11
-
-
0003816813
-
-
Landes Bioscience, Austin
-
Capy P., Bazin C., Higuet D., and Langin T. Dynamics and Evolution of Transposable Elements (1997), Landes Bioscience, Austin
-
(1997)
Dynamics and Evolution of Transposable Elements
-
-
Capy, P.1
Bazin, C.2
Higuet, D.3
Langin, T.4
-
12
-
-
0034235829
-
Retrotransposition of the I factor, a non-long terminal repeat retrotransposon of Drosophila, generates tandem repeats at the 3′ end
-
Chaboissier M.C., Finnegan D., and Bucheton A. Retrotransposition of the I factor, a non-long terminal repeat retrotransposon of Drosophila, generates tandem repeats at the 3′ end. Nucleic Acids Res. 28 (2000) 2467-2472
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 2467-2472
-
-
Chaboissier, M.C.1
Finnegan, D.2
Bucheton, A.3
-
13
-
-
0037124030
-
Tandem UAA repeats at the 3′-end of the transcript are essential for the precise initiation of reverse transcription of the I factor in Drosophila melanogaster
-
Chambeyron S., Bucheton A., and Busseau I. Tandem UAA repeats at the 3′-end of the transcript are essential for the precise initiation of reverse transcription of the I factor in Drosophila melanogaster. J. Biol. Chem. 277 (2002) 17877-17882
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 17877-17882
-
-
Chambeyron, S.1
Bucheton, A.2
Busseau, I.3
-
14
-
-
0042121237
-
Multiple sequence alignment with the Clustal series of programs
-
Chenna R., Sugawara H., Koike T., Lopez R., Gibson T.J., Higgins D.G., and Thompson J.D. Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res. 31 (2003) 3497-3500
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3497-3500
-
-
Chenna, R.1
Sugawara, H.2
Koike, T.3
Lopez, R.4
Gibson, T.J.5
Higgins, D.G.6
Thompson, J.D.7
-
15
-
-
0034536408
-
Transposons but not retrotransposons are located preferentially in regions of high recombination rate in Caenorhabditis elegans
-
Duret L., Marais G., and Biémont C. Transposons but not retrotransposons are located preferentially in regions of high recombination rate in Caenorhabditis elegans. Genetics 156 (2000) 1661-1669
-
(2000)
Genetics
, vol.156
, pp. 1661-1669
-
-
Duret, L.1
Marais, G.2
Biémont, C.3
-
16
-
-
0031127307
-
Transposable elements: how non-LTR retrotransposons do it
-
Finnegan D.J. Transposable elements: how non-LTR retrotransposons do it. Curr. Biol. 7 (1997) R245-R248
-
(1997)
Curr. Biol.
, vol.7
-
-
Finnegan, D.J.1
-
17
-
-
0037154275
-
Recombination rates between adjacent genic and retrotransposon regions in maize vary by 2 orders of magnitude
-
Fu H., Zheng Z., and Dooner H.K. Recombination rates between adjacent genic and retrotransposon regions in maize vary by 2 orders of magnitude. Proc. Natl. Acad. Sci. U.S.A. 99 (2002) 1082-1087
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 1082-1087
-
-
Fu, H.1
Zheng, Z.2
Dooner, H.K.3
-
18
-
-
23944448661
-
Telomere-specific non-LTR retrotransposons and telomere maintenance in the silkworm, Bombyx mori
-
Fujiwara H., Osanai M., Matsumoto T., and Kojima K.K. Telomere-specific non-LTR retrotransposons and telomere maintenance in the silkworm, Bombyx mori. Chromosome Res. 13 (2005) 455-467
-
(2005)
Chromosome Res.
, vol.13
, pp. 455-467
-
-
Fujiwara, H.1
Osanai, M.2
Matsumoto, T.3
Kojima, K.K.4
-
19
-
-
0025020445
-
A rapidly rearranging retrotransposon within the miniexon gene locus of Crithidia fasciculata
-
Gabriel A., Yen T.J., Schwartz D.C., Smith C.L., Boeke J.D., Sollner-Webb B., and Cleveland D.W. A rapidly rearranging retrotransposon within the miniexon gene locus of Crithidia fasciculata. Mol. Cell. Biol. 10 (1990) 615-624
-
(1990)
Mol. Cell. Biol.
, vol.10
, pp. 615-624
-
-
Gabriel, A.1
Yen, T.J.2
Schwartz, D.C.3
Smith, C.L.4
Boeke, J.D.5
Sollner-Webb, B.6
Cleveland, D.W.7
-
20
-
-
59649092057
-
-
Gish, W., 1996-2004. WU-BLAST. Available from: http://blast.wustl.edu.
-
Gish, W., 1996-2004. WU-BLAST. Available from: http://blast.wustl.edu.
-
-
-
-
21
-
-
12744261287
-
The genetics and genomics of the silkworm, Bombyx mori
-
Goldsmith M.R., Shimada T., and Abe H. The genetics and genomics of the silkworm, Bombyx mori. Annu. Rev. Entomol. 50 (2005) 71-100
-
(2005)
Annu. Rev. Entomol.
, vol.50
, pp. 71-100
-
-
Goldsmith, M.R.1
Shimada, T.2
Abe, H.3
-
22
-
-
0035022621
-
L1-like non-LTR retrotransposons in the yeast Candida albicans
-
Goodwin T.J., Ormandy J.E., and Poulter R.T. L1-like non-LTR retrotransposons in the yeast Candida albicans. Curr. Genet. 39 (2001) 83-91
-
(2001)
Curr. Genet.
, vol.39
, pp. 83-91
-
-
Goodwin, T.J.1
Ormandy, J.E.2
Poulter, R.T.3
-
23
-
-
0032946571
-
The modulation of DNA content: proximate causes and ultimate consequences
-
Gregory T.R., and Hebert P.D. The modulation of DNA content: proximate causes and ultimate consequences. Genome Res. 9 (1999) 317-324
-
(1999)
Genome Res.
, vol.9
, pp. 317-324
-
-
Gregory, T.R.1
Hebert, P.D.2
-
24
-
-
0037020114
-
The genome sequence of the malaria mosquito Anopheles gambiae
-
Holt R.A., Subramanian G.M., Halpern A., Sutton G.G., Charlab R., Nusskern D.R., Wincker P., Clark A.G., Ribeiro J.M., Wides R., Salzberg S.L., Loftus B., Yandell M., Majoros W.H., Rusch D.B., Lai Z., Kraft C.L., Abril J.F., Anthouard V., Arensburger P., Atkinson P.W., Baden H., de Berardinis V., Baldwin D., Benes V., Biedler J., Blass C., Bolanos R., Boscus D., Barnstead M., Cai S., Center A., Chaturverdi K., Christophides G.K., Chrystal M.A., Clamp M., Cravchik A., Curwen V., Dana A., Delcher A., Dew I., Evans C.A., Flanigan M., Grundschober-Freimoser A., Friedli L., Gu Z., Guan P., Guigo R., Hillenmeyer M.E., Hladun S.L., Hogan J.R., Hong Y.S., Hoover J., Jaillon O., Ke Z., Kodira C., Kokoza E., Koutsos A., Letunic I., Levitsky A., Liang Y., Lin J.J., Lobo N.F., Lopez J.R., Malek J.A., McIntosh T.C., Meister S., Miller J., Mobarry C., Mongin E., Murphy S.D., O'Brochta D.A., Pfannkoch C., Qi R., Regier M.A., Remington K., Shao H., Sharakhova M.V., Sitter C.D., Shetty J., Smith T.J., Strong R., Sun J., Thomasova D., Ton L.Q., Topalis P., Tu Z., Unger M.F., Walenz B., Wang A., Wang J., Wang M., Wang X., Woodford K.J., Wortman J.R., Wu M., Yao A., Zdobnov E.M., Zhang H., Zhao Q., Zhao S., Zhu S.C., Zhimulev I., Coluzzi M., dellaTorre A., Roth C.W., Louis C., Kalush F., Mural R.J., Myers E.W., Adams M.D., Smith H.O., Broder S., Gardner M.J., Fraser C.M., Birney E., Bork P., Brey P.T., Venter J.C., Weissenbach J., Kafatos F.C., Collins F.H., and Hoffman S.L. The genome sequence of the malaria mosquito Anopheles gambiae. Science 298 (2002) 129-149
-
(2002)
Science
, vol.298
, pp. 129-149
-
-
Holt, R.A.1
Subramanian, G.M.2
Halpern, A.3
Sutton, G.G.4
Charlab, R.5
Nusskern, D.R.6
Wincker, P.7
Clark, A.G.8
Ribeiro, J.M.9
Wides, R.10
Salzberg, S.L.11
Loftus, B.12
Yandell, M.13
Majoros, W.H.14
Rusch, D.B.15
Lai, Z.16
Kraft, C.L.17
Abril, J.F.18
Anthouard, V.19
Arensburger, P.20
Atkinson, P.W.21
Baden, H.22
de Berardinis, V.23
Baldwin, D.24
Benes, V.25
Biedler, J.26
Blass, C.27
Bolanos, R.28
Boscus, D.29
Barnstead, M.30
Cai, S.31
Center, A.32
Chaturverdi, K.33
Christophides, G.K.34
Chrystal, M.A.35
Clamp, M.36
Cravchik, A.37
Curwen, V.38
Dana, A.39
Delcher, A.40
Dew, I.41
Evans, C.A.42
Flanigan, M.43
Grundschober-Freimoser, A.44
Friedli, L.45
Gu, Z.46
Guan, P.47
Guigo, R.48
Hillenmeyer, M.E.49
Hladun, S.L.50
Hogan, J.R.51
Hong, Y.S.52
Hoover, J.53
Jaillon, O.54
Ke, Z.55
Kodira, C.56
Kokoza, E.57
Koutsos, A.58
Letunic, I.59
Levitsky, A.60
Liang, Y.61
Lin, J.J.62
Lobo, N.F.63
Lopez, J.R.64
Malek, J.A.65
McIntosh, T.C.66
Meister, S.67
Miller, J.68
Mobarry, C.69
Mongin, E.70
Murphy, S.D.71
O'Brochta, D.A.72
Pfannkoch, C.73
Qi, R.74
Regier, M.A.75
Remington, K.76
Shao, H.77
Sharakhova, M.V.78
Sitter, C.D.79
Shetty, J.80
Smith, T.J.81
Strong, R.82
Sun, J.83
Thomasova, D.84
Ton, L.Q.85
Topalis, P.86
Tu, Z.87
Unger, M.F.88
Walenz, B.89
Wang, A.90
Wang, J.91
Wang, M.92
Wang, X.93
Woodford, K.J.94
Wortman, J.R.95
Wu, M.96
Yao, A.97
Zdobnov, E.M.98
Zhang, H.99
Zhao, Q.100
Zhao, S.101
Zhu, S.C.102
Zhimulev, I.103
Coluzzi, M.104
dellaTorre, A.105
Roth, C.W.106
Louis, C.107
Kalush, F.108
Mural, R.J.109
Myers, E.W.110
Adams, M.D.111
Smith, H.O.112
Broder, S.113
Gardner, M.J.114
Fraser, C.M.115
Birney, E.116
Bork, P.117
Brey, P.T.118
Venter, J.C.119
Weissenbach, J.120
Kafatos, F.C.121
Collins, F.H.122
Hoffman, S.L.123
more..
-
25
-
-
33750460281
-
Insights into social insects from the genome of the honeybee Apis mellifera
-
Honeybee Genome Sequencing Consortium (HGSC)
-
Honeybee Genome Sequencing Consortium (HGSC). Insights into social insects from the genome of the honeybee Apis mellifera. Nature 443 (2006) 931-949
-
(2006)
Nature
, vol.443
, pp. 931-949
-
-
-
26
-
-
0030870835
-
A major non-LTR retrotransposon of Bombyx mori, L1Bm
-
Ichimura S., Mita K., and Sugaya K. A major non-LTR retrotransposon of Bombyx mori, L1Bm. J. Mol. Evol. 45 (1997) 253-264
-
(1997)
J. Mol. Evol.
, vol.45
, pp. 253-264
-
-
Ichimura, S.1
Mita, K.2
Sugaya, K.3
-
27
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
International Human Genome Sequencing Consortium (IHGSC)
-
International Human Genome Sequencing Consortium (IHGSC). Initial sequencing and analysis of the human genome. Nature 409 (2001) 860-921
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
-
28
-
-
59649125137
-
-
International Silkworm Genome Sequencing Consortium ISGSC, in preparation
-
International Silkworm Genome Sequencing Consortium (ISGSC), in preparation.
-
-
-
-
29
-
-
1842717957
-
Comparative recombination rates in the rat, mouse, and human genomes
-
Jensen-Seaman M.I., Furey T.S., Payseur B.A., Lu Y., Roskin K.M., Chen C.F., Thomas M.A., Haussler D., and Jacob H.J. Comparative recombination rates in the rat, mouse, and human genomes. Genome Res. 14 (2004) 528-538
-
(2004)
Genome Res.
, vol.14
, pp. 528-538
-
-
Jensen-Seaman, M.I.1
Furey, T.S.2
Payseur, B.A.3
Lu, Y.4
Roskin, K.M.5
Chen, C.F.6
Thomas, M.A.7
Haussler, D.8
Jacob, H.J.9
-
30
-
-
23844525077
-
Repbase update, a database of eukaryotic repetitive elements
-
Jurka J., Kapitonov V.V., Pavlicek A., Klonowski P., Kohany O., and Walichiewicz J. Repbase update, a database of eukaryotic repetitive elements. Cytogenet. Genome Res. 110 (2005) 462-467
-
(2005)
Cytogenet. Genome Res.
, vol.110
, pp. 462-467
-
-
Jurka, J.1
Kapitonov, V.V.2
Pavlicek, A.3
Klonowski, P.4
Kohany, O.5
Walichiewicz, J.6
-
31
-
-
33750831582
-
Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor
-
Kohany O., Gentles A.J., Hankus L., and Jurka J. Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor. BMC Bioinformatics 7 (2006) 474
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 474
-
-
Kohany, O.1
Gentles, A.J.2
Hankus, L.3
Jurka, J.4
-
32
-
-
1542513556
-
Mobile elements: drivers of genome evolution
-
Kazazian Jr. H.H. Mobile elements: drivers of genome evolution. Science 303 (2004) 1626-1632
-
(2004)
Science
, vol.303
, pp. 1626-1632
-
-
Kazazian Jr., H.H.1
-
33
-
-
0036021699
-
Transposable elements and the evolution of genome size in eukaryotes
-
Kidwell M.G. Transposable elements and the evolution of genome size in eukaryotes. Genetica 115 (2002) 49-63
-
(2002)
Genetica
, vol.115
, pp. 49-63
-
-
Kidwell, M.G.1
-
34
-
-
55449118548
-
ReAS: recovery of ancestral sequences for transposable elements from the unassembled reads of a whole genome shotgun
-
Li R., Ye J., Li S., Wang J., Han Y., Ye C., Wang J., Yang H., Yu J., Wong G.K.S., and Wang J. ReAS: recovery of ancestral sequences for transposable elements from the unassembled reads of a whole genome shotgun. PLoS Comput. Biol. 1 (2005) 313-321
-
(2005)
PLoS Comput. Biol.
, vol.1
, pp. 313-321
-
-
Li, R.1
Ye, J.2
Li, S.3
Wang, J.4
Han, Y.5
Ye, C.6
Wang, J.7
Yang, H.8
Yu, J.9
Wong, G.K.S.10
Wang, J.11
-
35
-
-
0035207756
-
Evolutionary dynamics in a novel L2 clade of non-LTR retrotransposons in Deuterostomia
-
Lovsin N., Gubensek F., and Kordi D. Evolutionary dynamics in a novel L2 clade of non-LTR retrotransposons in Deuterostomia. Mol. Biol. Evol. 18 (2001) 2213-2224
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 2213-2224
-
-
Lovsin, N.1
Gubensek, F.2
Kordi, D.3
-
36
-
-
0031857142
-
The RTE class of non-LTR retrotransposons is widely distributed in animals and is the origin of many SINEs
-
Malik H.S., and Eickbush T.H. The RTE class of non-LTR retrotransposons is widely distributed in animals and is the origin of many SINEs. Mol. Biol. Evol. 15 (1998) 1123-1134
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 1123-1134
-
-
Malik, H.S.1
Eickbush, T.H.2
-
37
-
-
0032976398
-
The age and evolution of non-LTR retrotransposable elements
-
Malik H.S., Burke W.D., and Eickbush T.H. The age and evolution of non-LTR retrotransposable elements. Mol. Biol. Evol. 16 (1999) 793-805
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 793-805
-
-
Malik, H.S.1
Burke, W.D.2
Eickbush, T.H.3
-
38
-
-
5144229657
-
The genome sequence of silkworm, Bombyx mori
-
Mita K., Kasahara M., Sasaki S., Nagayasu Y., Yamada T., Kanamori H., Namiki N., Kitagawa M., Yamashita H., Yasukochi Y., Kadono-Okuda K., Yamamoto K., Ajimura M., Ravikumar G., Shimomura M., Nagamura Y., Sasanuma S., Abe H., Shimada T., Morishita S., and Sasaki T. The genome sequence of silkworm, Bombyx mori. DNA Res. 11 (2004) 27-35
-
(2004)
DNA Res.
, vol.11
, pp. 27-35
-
-
Mita, K.1
Kasahara, M.2
Sasaki, S.3
Nagayasu, Y.4
Yamada, T.5
Kanamori, H.6
Namiki, N.7
Kitagawa, M.8
Yamashita, H.9
Yasukochi, Y.10
Kadono-Okuda, K.11
Yamamoto, K.12
Ajimura, M.13
Ravikumar, G.14
Shimomura, M.15
Nagamura, Y.16
Sasanuma, S.17
Abe, H.18
Shimada, T.19
Morishita, S.20
Sasaki, T.21
more..
-
39
-
-
0036613245
-
DNA repair mediated by endonuclease-independent LINE-1 retrotransposition
-
Morrish T.A., Gilbert N., Myers J.S., Vincent B.J., Stamato T.D., Taccioli G.E., Batzer M.A., and Moran J.V. DNA repair mediated by endonuclease-independent LINE-1 retrotransposition. Nat. Genet. 31 (2002) 159-165
-
(2002)
Nat. Genet.
, vol.31
, pp. 159-165
-
-
Morrish, T.A.1
Gilbert, N.2
Myers, J.S.3
Vincent, B.J.4
Stamato, T.D.5
Taccioli, G.E.6
Batzer, M.A.7
Moran, J.V.8
-
40
-
-
34250902354
-
Genome sequence of Aedes aegypti, a major Arbovirus vector
-
Nene V., et al. Genome sequence of Aedes aegypti, a major Arbovirus vector. Science 316 (2007) 1718-1723
-
(2007)
Science
, vol.316
, pp. 1718-1723
-
-
Nene, V.1
-
41
-
-
0029069498
-
Structural analysis of TRAS1, a novel family of telomeric repeat-associated retrotransposons in the silkworm, Bombyx mori
-
Okazaki S., Ishikawa H., and Fujiwara H. Structural analysis of TRAS1, a novel family of telomeric repeat-associated retrotransposons in the silkworm, Bombyx mori. Mol Cell Biol. 15 (1995) 4545-4552
-
(1995)
Mol Cell Biol.
, vol.15
, pp. 4545-4552
-
-
Okazaki, S.1
Ishikawa, H.2
Fujiwara, H.3
-
42
-
-
0028043243
-
A defective non-LTR retrotransposon is dispersed throughout the genome of the silkworm, Bombyx mori
-
Ogura T., Okano K., Tsuchida K., Miyajima N., Tanaka H., Takada N., Izumi S., Tomino S., and Maekawa H. A defective non-LTR retrotransposon is dispersed throughout the genome of the silkworm, Bombyx mori. Chromosoma 103 (1994) 311-323
-
(1994)
Chromosoma
, vol.103
, pp. 311-323
-
-
Ogura, T.1
Okano, K.2
Tsuchida, K.3
Miyajima, N.4
Tanaka, H.5
Takada, N.6
Izumi, S.7
Tomino, S.8
Maekawa, H.9
-
43
-
-
34347339518
-
Comparative genomic analysis of three Leishmania species that cause diverse human disease
-
Peacock C.S., Seeger K., Harris D., Murphy L., Ruiz J.C., Quail M.A., Peters N., Adlem E., Tivey A., Aslett M., Kerhornou A., Ivens A., Fraser A., Rajandream M.A., Carver T., Norbertczak H., Chillingworth T., Hance Z., Jagels K., Moule S., Ormond D., Rutter S., Squares R., Whitehead S., Rabbinowitsch E., Arrowsmith C., White B., Thurston S., Bringaud F., Baldauf S.L., Faulconbridge A., Jeffares D., Depledge D.P., Oyola S.O., Hilley J.D., Brito L.O., Tosi L.R., Barrell B., Cruz A.K., Mottram J.C., Smith D.F., and Berriman M. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Nat. Genet. 39 (2007) 839-847
-
(2007)
Nat. Genet.
, vol.39
, pp. 839-847
-
-
Peacock, C.S.1
Seeger, K.2
Harris, D.3
Murphy, L.4
Ruiz, J.C.5
Quail, M.A.6
Peters, N.7
Adlem, E.8
Tivey, A.9
Aslett, M.10
Kerhornou, A.11
Ivens, A.12
Fraser, A.13
Rajandream, M.A.14
Carver, T.15
Norbertczak, H.16
Chillingworth, T.17
Hance, Z.18
Jagels, K.19
Moule, S.20
Ormond, D.21
Rutter, S.22
Squares, R.23
Whitehead, S.24
Rabbinowitsch, E.25
Arrowsmith, C.26
White, B.27
Thurston, S.28
Bringaud, F.29
Baldauf, S.L.30
Faulconbridge, A.31
Jeffares, D.32
Depledge, D.P.33
Oyola, S.O.34
Hilley, J.D.35
Brito, L.O.36
Tosi, L.R.37
Barrell, B.38
Cruz, A.K.39
Mottram, J.C.40
Smith, D.F.41
Berriman, M.42
more..
-
44
-
-
0035345013
-
Meiotic recombination hot spots and cold spots
-
Petes D.T. Meiotic recombination hot spots and cold spots. Nat. Rev. Genet. 2 (2001) 360-369
-
(2001)
Nat. Rev. Genet.
, vol.2
, pp. 360-369
-
-
Petes, D.T.1
-
45
-
-
0035058360
-
Evolution of genome size: new approaches to an old problem
-
Petrov D.A. Evolution of genome size: new approaches to an old problem. Trends Genet. 17 (2001) 23-28
-
(2001)
Trends Genet.
, vol.17
, pp. 23-28
-
-
Petrov, D.A.1
-
46
-
-
0036121338
-
Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome
-
Rizzon C., Marais G., Gouy M., and Biémont C. Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome. Genome Res. 12 (2002) 400-407
-
(2002)
Genome Res.
, vol.12
, pp. 400-407
-
-
Rizzon, C.1
Marais, G.2
Gouy, M.3
Biémont, C.4
-
47
-
-
0345730821
-
Pattern of selection against transposons inferred from the distribution of Tc1, Tc3 and Tc5 insertions in the mut-7 line of the nematode Caenorhabditis elegans
-
Rizzon C., Martin E., Marais G., Duret L., Ségalat L., and Biémont C. Pattern of selection against transposons inferred from the distribution of Tc1, Tc3 and Tc5 insertions in the mut-7 line of the nematode Caenorhabditis elegans. Genetics 165 (2003) 1127-1135
-
(2003)
Genetics
, vol.165
, pp. 1127-1135
-
-
Rizzon, C.1
Martin, E.2
Marais, G.3
Duret, L.4
Ségalat, L.5
Biémont, C.6
-
48
-
-
0030240416
-
Bmmar1: a basal lineage of the mariner family of transposable elements in the silkworm moth, Bombyx mori
-
Robertson H.M., and Asplund M.L. Bmmar1: a basal lineage of the mariner family of transposable elements in the silkworm moth, Bombyx mori. Insect Biochem. Mol. Biol. 26 (1996) 945-954
-
(1996)
Insect Biochem. Mol. Biol.
, vol.26
, pp. 945-954
-
-
Robertson, H.M.1
Asplund, M.L.2
-
49
-
-
0037385761
-
Bmmar6, a second mori subfamily mariner transposon from the silkworm moth Bombyx mori
-
Robertson H.M., and Walden K.K.O. Bmmar6, a second mori subfamily mariner transposon from the silkworm moth Bombyx mori. Insect Mol Biol. 12 (2003) 167-171
-
(2003)
Insect Mol Biol.
, vol.12
, pp. 167-171
-
-
Robertson, H.M.1
Walden, K.K.O.2
-
50
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
51
-
-
0034072489
-
Detection and distribution patterns of telomerase activity in insects
-
Sasaki T., and Fujiwara H. Detection and distribution patterns of telomerase activity in insects. Eur. J. Biochem 267 (2000) 3025-3031
-
(2000)
Eur. J. Biochem
, vol.267
, pp. 3025-3031
-
-
Sasaki, T.1
Fujiwara, H.2
-
52
-
-
59649087280
-
-
Smit, A.F.A., Hubley, R., Green, P., 1996-2004. RepeatMasker Open-3.0. Available from: http://repeatmasker.org.
-
Smit, A.F.A., Hubley, R., Green, P., 1996-2004. RepeatMasker Open-3.0. Available from: http://repeatmasker.org.
-
-
-
-
53
-
-
34250813192
-
The release 5.1 annotation of Drosophila melanogaster heterochromatin
-
Smith C.D., Shu S., Mungall C.J., and Karpen G.H. The release 5.1 annotation of Drosophila melanogaster heterochromatin. Science 316 (2007) 1586-1591
-
(2007)
Science
, vol.316
, pp. 1586-1591
-
-
Smith, C.D.1
Shu, S.2
Mungall, C.J.3
Karpen, G.H.4
-
54
-
-
0030879327
-
A new family of site-specific retrotransposons, SART1, is inserted into telomeric repeats of the silkworm, Bombyx mori
-
Takahashi H., Okazaki S., and Fujiwara H. A new family of site-specific retrotransposons, SART1, is inserted into telomeric repeats of the silkworm, Bombyx mori. Nucleic Acids Res. 225 (1997) 1578-1584
-
(1997)
Nucleic Acids Res.
, vol.225
, pp. 1578-1584
-
-
Takahashi, H.1
Okazaki, S.2
Fujiwara, H.3
-
55
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura K., Dudley J., Nei M., and Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24 (2007) 1596-1599
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
56
-
-
0343118171
-
Cloning and characterization of a mariner-like element in the silkworm, Bombyx mori
-
Tomita S., Sohn B.H., and Tamura T. Cloning and characterization of a mariner-like element in the silkworm, Bombyx mori. Genes. Genet. Syst 72 (1997) 219-228
-
(1997)
Genes. Genet. Syst
, vol.72
, pp. 219-228
-
-
Tomita, S.1
Sohn, B.H.2
Tamura, T.3
-
57
-
-
10344265019
-
A draft sequence for the genome of the domesticated silkworm (Bombyx mori)
-
Xia Q., Zhou Z., Lu C., Cheng D., Dai F., Li B., Zhao P., Zha X., Cheng T., Chai C., Pan G., Xu J., Liu C., Lin Y., Qian J., Hou Y., Wu Z., Li G., Pan M., Li C., Shen Y., Lan X., Yuan L., Li T., Xu H., Yang G., Wan Y., Zhu Y., Yu M., Shen W., Wu D., Xiang Z., Yu J., Wang J., Li R., Shi J., Li H., Li G., Su J., Wang X., Li G., Zhang Z., Wu Q., Li J., Zhang Q., Wei N., Xu J., Sun H., Dong L., Liu D., Zhao S., Zhao X., Meng Q., Lan F., Huang X., Li Y., Fang L., Li C., Li D., Sun Y., Zhang Z., Yang Z., Huang Y., Xi Y., Qi Q., He D., Huang H., Zhang X., Wang Z., Li W., Cao Y., Yu Y., Yu H., Li J., Ye J., Chen H., Zhou Y., Liu B., Wang J., Ye J., Ji H., Li S., Ni P., Zhang J., Zhang Y., Zheng H., Mao B., Wang W., Ye C., Li S., Wang J., Wong G.K., and Yang H. A draft sequence for the genome of the domesticated silkworm (Bombyx mori). Science 10 (2004) 1937-1940
-
(2004)
Science
, vol.10
, pp. 1937-1940
-
-
Xia, Q.1
Zhou, Z.2
Lu, C.3
Cheng, D.4
Dai, F.5
Li, B.6
Zhao, P.7
Zha, X.8
Cheng, T.9
Chai C.10
Pan, G.11
Xu, J.12
Liu, C.13
Lin, Y.14
Qian, J.15
Hou, Y.16
Wu, Z.17
Li, G.18
Pan, M.19
Li, C.20
Shen, Y.21
Lan, X.22
Yuan, L.23
Li, T.24
Xu, H.25
Yang, G.26
Wan, Y.27
Zhu, Y.28
Yu, M.29
Shen, W.30
Wu, D.31
Xiang, Z.32
Yu, J.33
Wang, J.34
Li, R.35
Shi, J.36
Li, H.37
Li, G.38
Su, J.39
Wang, X.40
Li, G.41
Zhang, Z.42
Wu, Q.43
Li, J.44
Zhang, Q.45
Wei, N.46
Xu, J.47
Sun, H.48
Dong, L.49
Liu, D.50
Zhao, S.51
Zhao, X.52
Meng, Q.53
Lan, F.54
Huang, X.55
Li, Y.56
Fang, L.57
Li, C.58
Li, D.59
Sun, Y.60
Zhang, Z.61
Yang, Z.62
Huang, Y.63
Xi, Y.64
Qi, Q.65
He, D.66
Huang, H.67
Zhang, X.68
Wang, Z.69
Li, W.70
Cao, Y.71
Yu, Y.72
Yu, H.73
Li, J.74
Ye, J.75
Chen, H.76
Zhou, Y.77
Liu, B.78
Wang, J.79
Ye, J.80
Ji, H.81
Li, S.82
Ni, P.83
Zhang, J.84
Zhang, Y.85
Zheng, H.86
Mao, B.87
Wang, W.88
Ye, C.89
Li, S.90
Wang, J.91
Wong, G.K.92
Yang, H.93
more..
-
58
-
-
0023752441
-
The site-specific ribosomal DNA insertion element R1Bm belongs to a class of non-long-terminal-repeat retrotransposons
-
Xiong Y., and Eickbush T.H. The site-specific ribosomal DNA insertion element R1Bm belongs to a class of non-long-terminal-repeat retrotransposons. Mol. Cell. Biol. 8 (1988) 114-123
-
(1988)
Mol. Cell. Biol.
, vol.8
, pp. 114-123
-
-
Xiong, Y.1
Eickbush, T.H.2
-
59
-
-
0027281011
-
Pao, a highly divergent retrotransposable element from Bombyx mori containing long terminal repeats with tandem copies of the putative R region
-
Xiong Y., Burke W.D., and Eickbush T.H. Pao, a highly divergent retrotransposable element from Bombyx mori containing long terminal repeats with tandem copies of the putative R region. Nucleic Acids Res. 11 (1993) 2117-2123
-
(1993)
Nucleic Acids Res.
, vol.11
, pp. 2117-2123
-
-
Xiong, Y.1
Burke, W.D.2
Eickbush, T.H.3
-
60
-
-
0027175076
-
Dong, a non-long terminal repeat (non-LTR) retrotransposable element from Bombyx mori
-
Xiong Y., and Eickbush T.H. Dong, a non-long terminal repeat (non-LTR) retrotransposable element from Bombyx mori. Nucleic Acids Res. 21 (1993) 1318
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 1318
-
-
Xiong, Y.1
Eickbush, T.H.2
-
61
-
-
46249126686
-
A BAC-based integrated linkage map of the silkworm, Bombyx mori
-
Yamamoto K., Nohata J., Kadono-Okuda K., Narukawa J., Sasanuma M., Sasanuma S., Minami H., Shimomura M., Suetsugu Y., Banno Y., Osoegawa K., de Jong P.J., Goldsmith M.R., and Mita K. A BAC-based integrated linkage map of the silkworm, Bombyx mori. Genome Biol. 9 (2008) R21
-
(2008)
Genome Biol.
, vol.9
-
-
Yamamoto, K.1
Nohata, J.2
Kadono-Okuda, K.3
Narukawa, J.4
Sasanuma, M.5
Sasanuma, S.6
Minami, H.7
Shimomura, M.8
Suetsugu, Y.9
Banno, Y.10
Osoegawa, K.11
de Jong, P.J.12
Goldsmith, M.R.13
Mita, K.14
-
62
-
-
23844480354
-
Competition between R1 and R2 transposable elements in the 28S rRNA genes of insects
-
Ye J., Perez-Gonzalez C.E., Eickbush D.G., and Eickbush T.H. Competition between R1 and R2 transposable elements in the 28S rRNA genes of insects. Cytogenet. Genome Res. 110 (2005) 299-306
-
(2005)
Cytogenet. Genome Res.
, vol.110
, pp. 299-306
-
-
Ye, J.1
Perez-Gonzalez, C.E.2
Eickbush, D.G.3
Eickbush, T.H.4
|