-
1
-
-
1942443733
-
Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons
-
Acinas, S.G., L.A. Marcelino, V. Klepac-Ceraj, and M.F. Polz. 2004. Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons. J. Bacteriol. 186:2629-2635.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2629-2635
-
-
Acinas, S.G.1
Marcelino, L.A.2
Klepac-Ceraj, V.3
Polz, M.F.4
-
2
-
-
20444376852
-
Accelerated sulfur cycle in coastal marine sediment beneath areas of intensive shellfish aquaculture
-
Asami, H., M. Aida, and K. Watanabe. 2005. Accelerated sulfur cycle in coastal marine sediment beneath areas of intensive shellfish aquac-ulture. Appl. Environ. Microbiol. 71 :2925-2933.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 2925-2933
-
-
Asami, H.1
Aida, M.2
Watanabe, K.3
-
3
-
-
13444311999
-
Microbial symbiosis in annelida
-
Bright, M., and O. Giere. 2005. Microbial symbiosis in Annelida. Symbiosis 38:1-45.
-
(2005)
Symbiosis
, vol.38
, pp. 1-45
-
-
Bright, M.1
Giere, O.2
-
4
-
-
21844518380
-
Larval development and the formation of the gut of siboglinum poseidoni flugel & langhof (Pogonophora, Perviata)
-
Callsen-Cencic, P., and H.J. Flugel. 1995. Larval development and the formation of the gut of Siboglinum poseidoni Flugel & Langhof (Pogonophora, Perviata). Evidence of protostomian affinity. Sarsia 80:73-89.
-
(1995)
Evidence of Protostomian Affinity. Sarsia
, vol.80
, pp. 73-89
-
-
Callsen-Cencic, P.1
Flugel, H.J.2
-
5
-
-
0028178961
-
Vertical transmission of a chemoautotrophic sym-biont in the protobranch bivalve Solemya reidi
-
Cary, S.C. 1994. Vertical transmission of a chemoautotrophic sym-biont in the protobranch bivalve, Solemya reidi. Mol. Mar. Biol. Bio-technol. 3:121-130.
-
(1994)
Mol. Mar. Biol. Biotechnol.
, vol.3
, pp. 121-130
-
-
Cary, S.C.1
-
6
-
-
0002328301
-
Observations on the reproductive biology of the hydrothermal vent tube worm Riftia pachyptila
-
Cary, S.C., H. Felbeck, and N.D. Holland. 1989. Observations on the reproductive biology of the hydrothermal vent tube worm Riftia pac-hyptila. Mar. Ecol. Prog. Ser. 52:89-94.
-
(1989)
Mar. Ecol. Prog. Ser.
, vol.52
, pp. 89-94
-
-
Cary, S.C.1
Felbeck, H.2
Holland, N.D.3
-
7
-
-
0027211060
-
Transovarial inheritance of endosymbiotic bacteria in clams inhabiting deepsea hydrothermal vents and cold seeps
-
USA
-
Cary, S.C., and S.J. Giovannoni. 1993. Transovarial inheritance of endosymbiotic bacteria in clams inhabiting deep-sea hydrothermal vents and cold seeps. Proc. Natl. Acad. Sci. USA 90:5695-5699.
-
(1993)
Proc. Natl. Acad. Sci.
, vol.90
, pp. 5695-5699
-
-
Cary, S.C.1
Giovannoni, S.J.2
-
8
-
-
0027551748
-
Identification and localization of bacterial endosymbionts in hydrothermal vent taxa with symbiont-specific polymerase chain reaction amplification and in situ hybridization techniques
-
Cary, S.C., W. Warren, E. Anderson, and S.J. Giovannoni. 1993. Identification and localization of bacterial endosymbionts in hydro-thermal vent taxa with symbiont-specific polymerase chain reaction amplification and in situ hybridization techniques. Mol. Mar. Biol. Biotechnol. 2:51-62.
-
(1993)
Mol. Mar. Biol. Biotechnol.
, vol.2
, pp. 51-62
-
-
Cary, S.C.1
Warren, W.2
Anderson, E.3
Giovannoni, S.J.4
-
9
-
-
0020700360
-
Symbiotic chemoautotrophic bacteria in marine invertebrates from sulphide-rich habitais
-
Cavanaugh, C.M. 1983. Symbiotic chemoautotrophic bacteria in marine invertebrates from sulphide-rich habitais. Nature 302:58-61.
-
(1983)
Nature
, vol.302
, pp. 58-61
-
-
Cavanaugh, C.M.1
-
10
-
-
0000953831
-
Prokaryotic cells in the hydrothermal vent tube worm riftia pachyptila Jones: Possible chemoautotrophic symbionts
-
Cavanaugh, C.M., S.L. Gardiner, M.L. Jones, H.W. Jannasch, and J.B. Waterbury. 1981. Prokaryotic cells in the hydrothermal vent tube worm Riftia pachyptila Jones: Possible chemoautotrophic symbionts. Science 213:340-342.
-
(1981)
Science
, vol.213
, pp. 340-342
-
-
Cavanaugh, C.M.1
Gardiner, S.L.2
Jones, M.L.3
Jannasch, H.W.4
Waterbury, J.B.5
-
11
-
-
34147106117
-
Actual distribution of bacteriocytes in the trophosome of a beard worm (Oligobrachia mashikoi, Siboglinidae, Annelida): Clarification using whole-mount in situ hybridization
-
Deguchi, M., N. Kubota, A. Matsuno, M. Kanemori, Y. Fukumori, and Y. Sasayama. 2007. Actual distribution of bacteriocytes in the trophosome of a beard worm (Oligobrachia mashikoi, Siboglinidae, Annelida): Clarification using whole-mount in situ hybridization. Acta. Zool. 88:129-135.
-
(2007)
Acta. Zool.
, vol.88
, pp. 129-135
-
-
Deguchi, M.1
Kubota, N.2
Matsuno, A.3
Kanemori, M.4
Fukumori, Y.5
Sasayama, Y.6
-
12
-
-
2142802647
-
Chemoattraction of Vibrio fischeri to serine, nucleosides, and N-acetyl-neuraminic acid, a component of squid light-organ mucus
-
DeLoney-Marino, C.R., A.J. Wolfe, and K.L. Visick. 2003. Chemoat-traction of Vibrio fischeri to serine, nucleosides, and N-acetyl-neuraminic acid, a component of squid light-organ mucus. Appl. Environ. Microbiol. 69:7527-7530.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 7527-7530
-
-
Deloney-Marino, C.R.1
Wolfe, A.J.2
Visick, K.L.3
-
13
-
-
0000434329
-
A new hermaphroditic pogonophore from the Skagerrak
-
Flugel, H.J., and I. Langhof. 1983. A new hermaphroditic pogono-phore from the Skagerrak. Sarsia 68:131-138.
-
(1983)
Sarsia
, vol.68
, pp. 131-138
-
-
Flugel, H.J.1
Langhof, I.2
-
14
-
-
0002024186
-
The importance of viable but nonculturable bacteria in biogeochemistry
-
In R.R. Colwell and D.J. Grimes (ed.), American Society Microbiology, Washington, D.C
-
Grimes, D.J., Mills, A.L., and Nealson, K.H. 2000. The importance of viable but nonculturable bacteria in biogeochemistry, p. 209-227. In R.R. Colwell and D.J. Grimes (ed.), Nonculturable microorganisms in the environment. American Society Microbiology, Washington, D.C.
-
(2000)
Nonculturable Microorganisms in the Environment
, pp. 209-227
-
-
Grimes, D.J.1
Mills, A.L.2
Nealson, K.H.3
-
15
-
-
0029959336
-
Environmental transmission of a sulfur-oxidizing bacterial gill endosymbiont in the tropical lucinid bivalve Codakia orbicularis
-
Gros. O., A. Darrasse, P. Durand, L. Frenkiel, and M. Moueza. 1996. Environmental transmission of a sulfur-oxidizing bacterial gill endo-symbiont in the tropical lucinid bivalve Codakia orbicularis. Appl. Environ. Microbiol. 62:2324-2330.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 2324-2330
-
-
Gros., O.1
Darrasse, A.2
Durand, P.3
Frenkiel, L.4
Moueza, M.5
-
16
-
-
18844424903
-
Molecular phylogeny of siboglinids annelids (a.k.a. pogonophorans): A review
-
Halanych, K.M. 2005. Molecular phylogeny of siboglinids annelids (a.k.a. pogonophorans): a review. Hydrobiologia. 535/536:297-307.
-
(2005)
Hydrobiologia
, vol.535
, Issue.536
, pp. 297-307
-
-
Halanych, K.M.1
-
17
-
-
0001976543
-
A new species of the genus Oligobrachia (Pogonophora) collected from Tsukumo Bay, Noto Peninsula
-
(In Japanese with English summary)
-
Imajima, M. 1973. A new species of the genus Oligobrachia (Pogonophora) collected from Tsukumo Bay, Noto Peninsula. Ann. Rep. Noto. Mar. Lab. 13:7-12. (In Japanese with English summary)
-
(1973)
Ann. Rep. Noto. Mar. Lab.
, vol.13
, pp. 7-12
-
-
Imajima, M.1
-
18
-
-
0026631342
-
Development and application of a new method to extract bacterial DNA from soil based on separation of bacteria from soil with cation-exchange resin.
-
Jacobsen, C.S., and O.F. Rasmussen. 1992. Development and application of a new method to extract bacterial DNA from soil based on separation of bacteria from soil with cation-exchange resin. Appl. Environ. Microbiol. 58:2458-2462.
-
(1992)
Appl. Environ. Microbiol.
, vol.58
, pp. 2458-2462
-
-
Jacobsen, C.S.1
Rasmussen, O.F.2
-
19
-
-
0007107917
-
Light and scanning electron microscopic studies of spermatogenesis in the vestimentiferan tube worn Riftia pachyptila (Pogonophora: Obturata)
-
Jones, M.L., and S.L. Gardiner. 1985. Light and scanning electron microscopic studies of spermatogenesis in the vestimentiferan tube worn Riftia pachyptila (Pogonophora: Obturata). Trans. Am. Microsc. Soc. 104:1-18.
-
(1985)
Trans. Am. Microsc. Soc.
, vol.104
, pp. 1-18
-
-
Jones, M.L.1
Gardiner, S.L.2
-
20
-
-
0001593663
-
Evidence for a transient digestive tract in vestimentifera
-
Jones, M.L., and S.L. Gardiner. 1988. Evidence for a transient digestive tract in vestimentifera. Proc. Biol. Soc. Wash. 101:423-433.
-
(1988)
Proc. Biol. Soc. Wash.
, vol.101
, pp. 423-433
-
-
Jones, M.L.1
Gardiner, S.L.2
-
21
-
-
0030613795
-
32 and abnormal proteins in Escherichia coli
-
Kanemori, M., K. Nishihara, H. Yanagi, and T. Yura. 1997. Synergistic roles of HslVU and other ATP-dependent proteases in controlling in vivo turnover of σ32 and abnormal proteins in Escherichia coli. J. Bacteriol. 179:7219-7225.
-
(1997)
J. Bacteriol
, vol.179
, pp. 7219-7225
-
-
Kanemori, M.1
Nishihara, K.2
Yanagi, H.3
Yura, T.4
-
22
-
-
0042976082
-
Molecular characterization andin situ localization of endosymbiotic 16S ribosomal RNA and RuBisCO genes in the pogonophoran tissue
-
Kimura, H., M. Sato, Y. Sasayama, and T. Naganuma. 2003. Molecular characterization and in situ localization of endosymbiotic 16S ribosomal RNA and RuBisCO genes in the pogonophoran tissue. Mar. Biotechnol. 5:261-269.
-
(2003)
Mar. Biotechnol.
, vol.5
, pp. 261-269
-
-
Kimura, H.1
Sato, M.2
Sasayama, Y.3
Naganuma, T.4
-
23
-
-
0035173421
-
Rrndb: The ribosomal RNA operon copy number database
-
Klappenbach, J.A., P.R. Saxman, J.R. Cole, and T.M. Schmidt. 2001. rrndb: the ribosomal RNA operon copy number database. Nucleic Acids Res. 29:181-184.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 181-184
-
-
Klappenbach, J.A.1
Saxman, P.R.2
Cole, J.R.3
Schmidt, T.M.4
-
24
-
-
0030117113
-
Vertical transmission of chemoautotrophic symbionts in the bivalve Solemya velum (Bivalvia: Protobranchia)
-
Krueger, D.M., R.G. Gustafson, and C.M. Cavanaugh. 1996. Vertical transmission of chemoautotrophic symbionts in the bivalve Solemya velum (Bivalvia: Protobranchia). Biol. Bull. 190:195-202.
-
(1996)
Biol. Bull.
, vol.190
, pp. 195-202
-
-
Krueger, D.M.1
Gustafson, R.G.2
Cavanaugh, C.M.3
-
25
-
-
85013697243
-
Identification of endosymbionts in Oligobrachia mashikoi (Siboglinidae, Annelida)
-
Kubota, N., M. Kanemori, Y. Sasayama, M. Aida, and Y. Fukumori. 2007. Identification of endosymbionts in Oligobrachia mashikoi (Siboglinidae, Annelida). Microbes Environ. 22:136-144.
-
(2007)
Microbes Environ.
, vol.22
, pp. 136-144
-
-
Kubota, N.1
Kanemori, M.2
Sasayama, Y.3
Aida, M.4
Fukumori, Y.5
-
26
-
-
0031842281
-
Small-scale DNA sample preparation method for field PCR detection of microbial cells and spores in soil
-
Kuske, C.R., K.L. Banton, D.L. Adorada, P.C. Stark, K.K. Hill, and P.J. Jackson. 1998. Small-scale DNA sample preparation method for field PCR detection of microbial cells and spores in soil. Appl. Environ. Microbiol. 64:2463-2472.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 2463-2472
-
-
Kuske, C.R.1
Banton, K.L.2
Adorada, D.L.3
Stark, P.C.4
Hill, K.K.5
Jackson, P.J.6
-
27
-
-
50449147866
-
Transduction of linked genetic characters of the host by bacteriophage P1
-
Lennox, E.S. 1955. Transduction of linked genetic characters of the host by bacteriophage P1. Virology. 1:190-206.
-
(1955)
Virology
, vol.1
, pp. 190-206
-
-
Lennox, E.S.1
-
28
-
-
0038005024
-
Candidate division BD: Phy-logeny, distribution and abundance in soil ecosystems
-
Mummey, D.L., and P.D. Stahl. 2003. Candidate division BD: Phy-logeny, distribution and abundance in soil ecosystems. System. Appl. Microbiol. 26:228-235.
-
(2003)
System. Appl. Microbiol.
, vol.26
, pp. 228-235
-
-
Mummey, D.L.1
Stahl, P.D.2
-
29
-
-
26844478173
-
Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi
-
DOI 10.1073/pnas.0501541102
-
Numoto, N., T. Nakagawa, A. Kita, Y. Sasayama, Y. Fukumori, and K. Miki. 2005. Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi. Proc. Natl. Acad. Sci. USA 102:14521-14526. (Pubitemid 41457090)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.41
, pp. 14521-14526
-
-
Numoto, N.1
Nakagawa, T.2
Kita, A.3
Sasayama, Y.4
Fukumori, Y.5
Miki, K.6
-
30
-
-
33744967961
-
Horizontal endosymbiont transmission in hydrothermal vent tubeworms
-
Nussbaumer, A.D., C.R. Fisher, and M. Bright. 2006. Horizontal endosymbiont transmission in hydrothermal vent tubeworms. Nature 441:345-348.
-
(2006)
Nature
, vol.441
, pp. 345-348
-
-
Nussbaumer, A.D.1
Fisher, C.R.2
Bright, M.3
-
31
-
-
0034730156
-
Establishment of an animal-bacterial association: Recruiting symbiotic vibrios from the environment
-
USA
-
Nyholm, S.V., E.V. Stabb, E.G. Ruby, and M.J. McFall-Ngai. 2000. Establishment of an animal-bacterial association: recruiting symbiotic vibrios from the environment. Proc. Natl. Acad. Sci. USA 97:10231-10235.
-
(2000)
Proc. Natl. Acad. Sci.
, vol.97
, pp. 10231-10235
-
-
Nyholm, S.V.1
Stabb, E.V.2
Ruby, E.G.3
McFall-Ngai, M.J.4
-
32
-
-
0029994744
-
Cloning and sequencing of a gene encoding a new member of the tetratricopeptide protein family from magnetosomes of Magnetospirillum magnetotacticum
-
Okuda, Y., K. Denda, and Y. Fukumori. 1996. Cloning and sequencing of a gene encoding a new member of the tetratricopeptide protein family from magnetosomes of Magnetospirillum magnetotacticum. Gene 171:99-102.
-
(1996)
Gene
, vol.171
, pp. 99-102
-
-
Okuda, Y.1
Denda, K.2
Fukumori, Y.3
-
33
-
-
2542427835
-
Symbioses between marine nematodes and sulfur-oxidizing chemoautotrophic bacteria
-
Ott, J., M. Bright, and S. Bulgheresi. 2004. Symbioses between marine nematodes and sulfur-oxidizing chemoautotrophic bacteria. Symbiosis 36:103-126.
-
(2004)
Symbiosis
, vol.36
, pp. 103-126
-
-
Ott, J.1
Bright, M.2
Bulgheresi, S.3
-
34
-
-
0035535003
-
A cladistic analysis of Siboglinidae Cauller 1914 (Polychaeta, Annelida): Formerly the phyla Pogonophora and Vestimentifera
-
Rouse, G.W. 2001. A cladistic analysis of Siboglinidae Caullery, 1914 (Polychaeta, Annelida): formerly the phyla Pogonophora and Vestimentifera. Zool. J. Linn. Soc. 132:55-80.
-
(2001)
Zool. J. Linn. Soc.
, Issue.132
, pp. 55-80
-
-
Rouse, G.W.1
-
35
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook, J., E.F. Fritsch, and T. Maniatis. 1989. Molecular cloning a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular Cloning A Laboratory Manual, 2nd Ed
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
36
-
-
34248538431
-
Relationship between the lifestyle of a siboglinid (pogonopho-ran) polychaete Oligobrachia mashikoi, and the total sulfide and nitrogen levels in its habitat
-
Sasayama, Y., Y. Higashide, M. Sakai, M. Matada, and Y. Fukumori. 2007. Relationship between the lifestyle of a siboglinid (pogonopho-ran) polychaete, Oligobrachia mashikoi, and the total sulfide and nitrogen levels in its habitat. Zool. Sci. 24:131-136.
-
(2007)
Zool. Sci.
, vol.24
, pp. 131-136
-
-
Sasayama, Y.1
Higashide, Y.2
Sakai, M.3
Matada, M.4
Fukumori, Y.5
-
37
-
-
0842332876
-
External morphology of the posterior end, the 'Opisthosoma', of the beard worm Oligobrachia mashikoi (Pogonophora)
-
Sasayama, Y., M. Matada, Y. Fukumori, M. Umebayashi, A. Mat-suno, T. Nakagawa, and M. Imajima. 2003. External morphology of the posterior end, the 'Opisthosoma', of the beard worm Oligobrachia mashikoi (Pogonophora). Zool. Sci. 20:1411-1416.
-
(2003)
Zool. Sci
, vol.20
, pp. 1411-1416
-
-
Sasayama, Y.1
Matada, M.2
Fukumori, Y.3
Umebayashi, A.4
Mat-Suno, T.5
Nakagawa And, M.6
Imajima, M.7
-
38
-
-
0019842041
-
12C ratios in tissues of Pogonophora indicate unusual nutrition and metabolism
-
Southward, A.J., E.C. Southward, P.R. Dando, G.H. Rau, H. Felbeck, and H. Flugel. 1981. Bacterial symbionts and low 13C/12C ratios in tissues of Pogonophora indicate unusual nutrition and metabolism. Nature 293:616-620.
-
(1981)
Nature
, Issue.293
, pp. 616-620
-
-
Southward, A.J.1
Southward, E.C.2
Dando, P.R.3
Rau, G.H.4
Felbeck, H.5
Flugel, H.6
-
39
-
-
84972047864
-
Bacterial symbionts in Pogonophora
-
U.K.
-
Southward, E.C. 1982. Bacterial symbionts in Pogonophora. J. Mar. Biol. Ass. U.K. 62:889-906.
-
(1982)
J. Mar. Biol. Ass.
, vol.62
, pp. 889-906
-
-
Southward, E.C.1
-
40
-
-
84972054539
-
Development of the gut and segmentation of newly settled stages of Ridgeia (Vestimentifera): Implications for relationship between Vestimentifera and Pogonophora
-
U.K.
-
Southward, E.C. 1988. Development of the gut and segmentation of newly settled stages of Ridgeia (Vestimentifera): Implications for relationship between Vestimentifera and Pogonophora. J. Mar. Biol. Ass. U.K. 68:465-487.
-
(1988)
J. Mar. Biol. Ass.
, vol.68
, pp. 465-487
-
-
Southward, E.C.1
-
41
-
-
18844378853
-
Pogonophora (Annelida): Form and function
-
Southward, E.C., A. Schulze, and S.L. Gardiner. 2005. Pogonophora (Annelida): form and function. Hydrobiologia 535/536:227-251.
-
(2005)
Hydrobiologia
, vol.535
, Issue.536
, pp. 227-251
-
-
Southward, E.C.1
Schulze, A.2
Gardiner, S.L.3
-
42
-
-
23944506540
-
Chemosyn-thetic endosymbioses: Adaptations to oxic-anoxic interfaces
-
Stewart, F.J., I.L.G. Newton, and C.M. Cavanaugh. 2005. Chemosyn-thetic endosymbioses: adaptations to oxic-anoxic interfaces. Trends Microbiol. 13:439-448.
-
(2005)
Trends Microbiol.
, vol.13
, pp. 439-448
-
-
Stewart, F.J.1
Newton, I.L.G.2
Cavanaugh, C.M.3
-
43
-
-
0026708461
-
Rapid method for separation of bacterial DNA from humic substances in sediments for polymerase chain reaction
-
Tsai, Y., and B.H. Olson. 1992. Rapid method for separation of bacterial DNA from humic substances in sediments for polymerase chain reaction. Appl. Environ. Microbiol. 58:2292-2295.
-
(1992)
Appl. Environ. Microbiol.
, vol.58
, pp. 2292-2295
-
-
Tsai, Y.1
Olson, B.H.2
-
44
-
-
0030748867
-
Inhibition and facilitation of nucleic acid amplification
-
Wilson, I.G. 1997. Inhibition and facilitation of nucleic acid amplification. Appl. Environ. Microbiol. 63:3741-3751
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 3741-3751
-
-
Wilson, I.G.1
|