메뉴 건너뛰기




Volumn 43, Issue 2-3, 2009, Pages 429-444

Molecular conformation of n-alkanes using terrain/funneling methods

Author keywords

Fuel oils; Funneling methods; Multi scale global optimization; N alkane molecular conformation; Terrain methods

Indexed keywords

ATOMIC PHYSICS; BOUNDARY LAYER FLOW; CRYSTAL ATOMIC STRUCTURE; FUEL OILS; FUELS; GLOBAL OPTIMIZATION; HYDROCARBONS; OPTIMIZATION; PARAFFINS; POTENTIAL ENERGY; POTENTIAL ENERGY SURFACES; QUANTUM CHEMISTRY; RESIDUAL FUELS;

EID: 59449099935     PISSN: 09255001     EISSN: 15732916     Source Type: Journal    
DOI: 10.1007/s10898-007-9206-5     Document Type: Article
Times cited : (4)

References (39)
  • 2
    • 21044458135 scopus 로고    scopus 로고
    • Equilibrated polyethylene single-molecule crystals: Molecular dynamics simulations and analytic model of the global minimum of the free energy landscape
    • L. Larini A. Barbieri D. Prevosto P. Rolla D. Leporini 2005 Equilibrated polyethylene single-molecule crystals: molecular dynamics simulations and analytic model of the global minimum of the free energy landscape J. Phys.: Condens. Matter. 17 L199 L208
    • (2005) J. Phys.: Condens. Matter. , vol.17
    • Larini, L.1    Barbieri, A.2    Prevosto, D.3    Rolla, P.4    Leporini, D.5
  • 3
    • 0002935896 scopus 로고
    • The tunneling algorithm for the global minimization of functions
    • A.V. Levy A. Montalvo 1985 The tunneling algorithm for the global minimization of functions SIAM J. Sci. Stat. Comp. 6 15 29
    • (1985) SIAM J. Sci. Stat. Comp. , vol.6 , pp. 15-29
    • Levy, A.V.1    Montalvo, A.2
  • 5
    • 34249758275 scopus 로고
    • Finding all solutions to nonlinearly constrained systems of equations
    • C.D. Maranas C.A. Floudas 1995 Finding all solutions to nonlinearly constrained systems of equations J. Global Optim. 7 143 182
    • (1995) J. Global Optim. , vol.7 , pp. 143-182
    • Maranas, C.D.1    Floudas, C.A.2
  • 6
    • 26844496701 scopus 로고
    • A global optimization approach to Lennard-Jones microclusters
    • C.D. Maranas C.A. Floudas 1992 A global optimization approach to Lennard-Jones microclusters J. Chem. Phys. 97 7667 7678
    • (1992) J. Chem. Phys. , vol.97 , pp. 7667-7678
    • Maranas, C.D.1    Floudas, C.A.2
  • 7
    • 1842639266 scopus 로고    scopus 로고
    • Prediction of oligopeptide conformations via deterministic global optimization
    • I.P. Androulakis C.D. Maranas C.A. Floudas 1997 Prediction of oligopeptide conformations via deterministic global optimization J. Global Optim. 11 1 34
    • (1997) J. Global Optim. , vol.11 , pp. 1-34
    • Androulakis, I.P.1    Maranas, C.D.2    Floudas, C.A.3
  • 8
    • 0030871124 scopus 로고    scopus 로고
    • Global optimization in generalized geometric programming
    • C.D. Maranas C.A. Floudas 1997 Global optimization in generalized geometric programming Comput. Chem. Eng. 21 351 369
    • (1997) Comput. Chem. Eng. , vol.21 , pp. 351-369
    • Maranas, C.D.1    Floudas, C.A.2
  • 9
    • 26444470554 scopus 로고    scopus 로고
    • Locating all transition states and studying the reaction pathways of potential energy surfaces
    • K.M. Westerberg C.A. Floudas 1999 Locating all transition states and studying the reaction pathways of potential energy surfaces J. Chem. Phys. 110 9259 9295
    • (1999) J. Chem. Phys. , vol.110 , pp. 9259-9295
    • Westerberg, K.M.1    Floudas, C.A.2
  • 10
    • 0000292903 scopus 로고    scopus 로고
    • Predicting peptide structures using NMR data and deterministic global optimization
    • J.L. Klepeis C.A. Floudas D. Morikis 1999 Predicting peptide structures using NMR data and deterministic global optimization J. Comput. Chem. 20 1354 1370
    • (1999) J. Comput. Chem. , vol.20 , pp. 1354-1370
    • Klepeis, J.L.1    Floudas, C.A.2    Morikis, D.3
  • 11
    • 1542439085 scopus 로고
    • Homotopy-continuation algorithm for global optimization
    • Floudas, C.A., Pardalos, P.M. (eds.) Princeton Univ. Press
    • Sun A.C., Seider, W.D.: Homotopy-continuation algorithm for global optimization. In Floudas, C.A., Pardalos, P.M. (eds.) Recent Advances in Global Optimization, pp. 561-592. Princeton Univ. Press (1992)
    • (1992) Recent Advances in Global Optimization , pp. 561-592
    • Sun, A.C.1    Seider, W.D.2
  • 13
    • 33751433220 scopus 로고
    • Global optimization using interval analysis-the multidimensional case
    • E.R. Hansen 1980 Global optimization using interval analysis-the multidimensional case Numer. Math. 34 247 270
    • (1980) Numer. Math. , vol.34 , pp. 247-270
    • Hansen, E.R.1
  • 14
    • 26844449529 scopus 로고    scopus 로고
    • Deterministic global optimization of molecular structures using interval analysis
    • Y. Lin M.A. Stadtherr 2005 Deterministic global optimization of molecular structures using interval analysis J. Comput. Chem. 26 1413 1420
    • (2005) J. Comput. Chem. , vol.26 , pp. 1413-1420
    • Lin, Y.1    Stadtherr, M.A.2
  • 16
    • 0142059296 scopus 로고    scopus 로고
    • Multivariable terrain methods
    • A. Lucia F. Yang 2003 Multivariable terrain methods AIChE J. 49 2553 2563
    • (2003) AIChE J. , vol.49 , pp. 2553-2563
    • Lucia, A.1    Yang, F.2
  • 17
    • 6944257068 scopus 로고    scopus 로고
    • A geometric terrain methodology for global optimization
    • A. Lucia P.A. DiMaggio P. Depa 2004 A geometric terrain methodology for global optimization J. Global Optim. 29 297 314
    • (2004) J. Global Optim. , vol.29 , pp. 297-314
    • Lucia, A.1    Dimaggio, P.A.2    Depa, P.3
  • 18
    • 3042824542 scopus 로고    scopus 로고
    • Funneling algorithms for multi-scale optimization on rugged terrains
    • A. Lucia P.A. DiMaggio P. Depa 2004 Funneling algorithms for multi-scale optimization on rugged terrains Ind. Eng. Chem. Res. 43 3770 3781
    • (2004) Ind. Eng. Chem. Res. , vol.43 , pp. 3770-3781
    • Lucia, A.1    Dimaggio, P.A.2    Depa, P.3
  • 21
    • 59449100997 scopus 로고
    • Ph.D. Dissertation, University of Michigan
    • DeJong K.: Ph.D. Dissertation, University of Michigan (1976)
    • (1976)
    • Dejong, K.1
  • 22
    • 0026988817 scopus 로고
    • Genetic algorithms
    • J.H. Holland 1992 Genetic algorithms Sci. Am. 267 66
    • (1992) Sci. Am. , vol.267 , pp. 66
    • Holland, J.H.1
  • 24
    • 0028408819 scopus 로고
    • Fast stochastic global optimization
    • G.L. Bilbro 1994 Fast stochastic global optimization IEEE Trans. Sys. Man. Cyber 4 684 689
    • (1994) IEEE Trans. Sys. Man. Cyber , vol.4 , pp. 684-689
    • Bilbro, G.L.1
  • 25
    • 0001506011 scopus 로고
    • A chain of states method for investigating infrequent events in processes occurring in multistate, multidimensional systems
    • E.M. Sevick A.T. Bell D.N. Theodorou 1993 A chain of states method for investigating infrequent events in processes occurring in multistate, multidimensional systems J. Chem. Phys. 98 3196 3212
    • (1993) J. Chem. Phys. , vol.98 , pp. 3196-3212
    • Sevick, E.M.1    Bell, A.T.2    Theodorou, D.N.3
  • 27
    • 0020170122 scopus 로고
    • Calculation of the three dimensional structure of the membrane-bound portion of melittin from its amino acid sequence
    • M.R. Pincus R.D. Klausner H.A. Scheraga 1982 Calculation of the three dimensional structure of the membrane-bound portion of melittin from its amino acid sequence Proc. Nat. Acad. Sci. 79 5107 5110
    • (1982) Proc. Nat. Acad. Sci. , vol.79 , pp. 5107-5110
    • Pincus, M.R.1    Klausner, R.D.2    Scheraga, H.A.3
  • 28
    • 84988099596 scopus 로고
    • Revised algorithm for the build-up procedure for predicting protein conformation by energy minimization
    • K.D. Gibson H.A. Scheraga 1987 Revised algorithm for the build-up procedure for predicting protein conformation by energy minimization J. Comput. Chem. 8 826 834
    • (1987) J. Comput. Chem. , vol.8 , pp. 826-834
    • Gibson, K.D.1    Scheraga, H.A.2
  • 29
    • 0026690571 scopus 로고
    • A new approach to protein folding recognition
    • D.T. Jones W.R. Taylor J.M. Thornton 1992 A new approach to protein folding recognition Nature 358 86 89
    • (1992) Nature , vol.358 , pp. 86-89
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 30
    • 0003067207 scopus 로고
    • Location of saddle points and minimum energy paths by a constrained simplex optimization procedure
    • K. Muller L.D. Brown 1979 Location of saddle points and minimum energy paths by a constrained simplex optimization procedure Theor. Chim. Acta. 53 75 93
    • (1979) Theor. Chim. Acta. , vol.53 , pp. 75-93
    • Muller, K.1    Brown, L.D.2
  • 31
    • 36749114393 scopus 로고
    • On finding transition states
    • C.J. Cerjan W.H. Miller 1981 On finding transition states J. Chem. Phys. 75 2800 2806
    • (1981) J. Chem. Phys. , vol.75 , pp. 2800-2806
    • Cerjan, C.J.1    Miller, W.H.2
  • 32
    • 84988122931 scopus 로고
    • An algorithm for the location of transition states
    • J. Baker 1986 An algorithm for the location of transition states J. Comput. Chem. 7 385 395
    • (1986) J. Comput. Chem. , vol.7 , pp. 385-395
    • Baker, J.1
  • 34
    • 0030170864 scopus 로고    scopus 로고
    • Structural optimization of Lennard-Jones clusters by a genetic algorithm. Chem
    • D.M. Deaven N. Tit J.R. Morris K.M. Ho 1996 Structural optimization of Lennard-Jones clusters by a genetic algorithm. Chem Phys. Lett. 256 195 200
    • (1996) Phys. Lett. , vol.256 , pp. 195-200
    • Deaven, D.M.1    Tit, N.2    Morris, J.R.3    Ho, K.M.4
  • 35
    • 2942576805 scopus 로고    scopus 로고
    • Global geometry optimization of atomic clusters using a modified genetic algorithm in space-fixed coordinates
    • J.A. Niesse H.R. Mayne 1996 Global geometry optimization of atomic clusters using a modified genetic algorithm in space-fixed coordinates J. Chem. Phys. 105 4700 4706
    • (1996) J. Chem. Phys. , vol.105 , pp. 4700-4706
    • Niesse, J.A.1    Mayne, H.R.2
  • 36
    • 0000560869 scopus 로고    scopus 로고
    • Global optimization by basin hopping and the lowest energy structures of Lennard-Jones clusters containing up to 110 atoms
    • D.J. Wales J.P.K. Doye 1997 Global optimization by basin hopping and the lowest energy structures of Lennard-Jones clusters containing up to 110 atoms J. Phys. Chem. A. 101 5111 5116
    • (1997) J. Phys. Chem. A. , vol.101 , pp. 5111-5116
    • Wales, D.J.1    Doye, J.P.K.2
  • 37
    • 0036492364 scopus 로고    scopus 로고
    • Saddle points and dynamics of Lennard-Jones clusters, solids and supercooled liquids
    • J.P.K. Doye D.J. Wales 2002 Saddle points and dynamics of Lennard-Jones clusters, solids and supercooled liquids J. Chem. Phys. 116 3777 3788
    • (2002) J. Chem. Phys. , vol.116 , pp. 3777-3788
    • Doye, J.P.K.1    Wales, D.J.2
  • 38
    • 0038459088 scopus 로고
    • Locating transition states using double-ended classical trajectories
    • A. Matro D.L. Freeman J.D. Doll 1994 Locating transition states using double-ended classical trajectories J. Chem. Phys. 101 10458 10463
    • (1994) J. Chem. Phys. , vol.101 , pp. 10458-10463
    • Matro, A.1    Freeman, D.L.2    Doll, J.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.