-
1
-
-
16644375793
-
Formation of disulfide bonds in proteins and peptides
-
Bulaj G. Formation of disulfide bonds in proteins and peptides. Biotechnol. Adv. 23 (2005) 87-92
-
(2005)
Biotechnol. Adv.
, vol.23
, pp. 87-92
-
-
Bulaj, G.1
-
2
-
-
0019881763
-
Disulphide bridges in globular proteins
-
Thornton J.M. Disulphide bridges in globular proteins. J. Mol. Biol. 151 (1981) 261-287
-
(1981)
J. Mol. Biol.
, vol.151
, pp. 261-287
-
-
Thornton, J.M.1
-
3
-
-
0032788590
-
Amino acid neighbours and detailed conformational analysis of cysteines in proteins
-
Petersen M.T., Jonson P.H., and Petersen S.B. Amino acid neighbours and detailed conformational analysis of cysteines in proteins. Protein Eng. 12 (1999) 535-548
-
(1999)
Protein Eng.
, vol.12
, pp. 535-548
-
-
Petersen, M.T.1
Jonson, P.H.2
Petersen, S.B.3
-
4
-
-
33845618043
-
Limited tendency of alpha-helical residues to form disulfide bridges: a structural explanation
-
De Simone A., Berisio R., Zagari A., and Vitagliano L. Limited tendency of alpha-helical residues to form disulfide bridges: a structural explanation. J. Pept. Sci. 12 (2006) 740-747
-
(2006)
J. Pept. Sci.
, vol.12
, pp. 740-747
-
-
De Simone, A.1
Berisio, R.2
Zagari, A.3
Vitagliano, L.4
-
6
-
-
0037162464
-
Genomic evidence that the intracellular proteins of archaeal microbes contain disulfide bonds
-
Mallick P., Boutz D.R., Eisenberg D., and Yeates T.O. Genomic evidence that the intracellular proteins of archaeal microbes contain disulfide bonds. Proc. Natl. Acad. Sci. U. S. A. 99 (2002) 9679-9684
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 9679-9684
-
-
Mallick, P.1
Boutz, D.R.2
Eisenberg, D.3
Yeates, T.O.4
-
7
-
-
38049059360
-
Reconsideration of an early dogma, saying "there is no evidence for disulfide bonds in proteins from archaea"
-
Ladenstein R., and Ren B. Reconsideration of an early dogma, saying "there is no evidence for disulfide bonds in proteins from archaea". Extremophiles 12 (2008) 29-38
-
(2008)
Extremophiles
, vol.12
, pp. 29-38
-
-
Ladenstein, R.1
Ren, B.2
-
8
-
-
33748331135
-
Protein disulfides and protein disulfide oxidoreductases in hyperthermophiles
-
Ladenstein R., and Ren B. Protein disulfides and protein disulfide oxidoreductases in hyperthermophiles. FEBS. J. 273 (2006) 4170-4185
-
(2006)
FEBS. J.
, vol.273
, pp. 4170-4185
-
-
Ladenstein, R.1
Ren, B.2
-
9
-
-
0028126676
-
Optimization of the electrostatic interactions in proteins of different functional and folding type
-
Spassov V.Z., Karshikoff A.D., and Ladenstein R. Optimization of the electrostatic interactions in proteins of different functional and folding type. Protein Sci. 3 (1994) 1556-1569
-
(1994)
Protein Sci.
, vol.3
, pp. 1556-1569
-
-
Spassov, V.Z.1
Karshikoff, A.D.2
Ladenstein, R.3
-
10
-
-
0033775891
-
Physiological functions of thioredoxin and thioredoxin reductase
-
Arner E.S., and Holmgren A. Physiological functions of thioredoxin and thioredoxin reductase. Eur. J. Biochem. 267 (2000) 6102-6109
-
(2000)
Eur. J. Biochem.
, vol.267
, pp. 6102-6109
-
-
Arner, E.S.1
Holmgren, A.2
-
12
-
-
10644295071
-
Flavoprotein disulfide reductases: advances in chemistry and function
-
Argyrou A., and Blanchard J.S. Flavoprotein disulfide reductases: advances in chemistry and function. Prog. Nucleic. Acid. Res. Mol. Biol. 78 (2004) 89-142
-
(2004)
Prog. Nucleic. Acid. Res. Mol. Biol.
, vol.78
, pp. 89-142
-
-
Argyrou, A.1
Blanchard, J.S.2
-
13
-
-
0036629836
-
The diversity and evolution of thioredoxin reductase: new perspectives
-
Hirt R.P., Muller S., Embley T.M., and Coombs G.H. The diversity and evolution of thioredoxin reductase: new perspectives. Trends Parasitol. 18 (2002) 302-308
-
(2002)
Trends Parasitol.
, vol.18
, pp. 302-308
-
-
Hirt, R.P.1
Muller, S.2
Embley, T.M.3
Coombs, G.H.4
-
14
-
-
0033781942
-
Thioredoxin reductase two modes of catalysis have evolved
-
Williams C.H., Arscott L.D., Muller S., Lennon B.W., Ludwig M.L., Wang P.F., Veine D.M., Becker K., and Schirmer R.H. Thioredoxin reductase two modes of catalysis have evolved. Eur. J. Biochem. 267 (2000) 6110-6117
-
(2000)
Eur. J. Biochem.
, vol.267
, pp. 6110-6117
-
-
Williams, C.H.1
Arscott, L.D.2
Muller, S.3
Lennon, B.W.4
Ludwig, M.L.5
Wang, P.F.6
Veine, D.M.7
Becker, K.8
Schirmer, R.H.9
-
15
-
-
46149124072
-
Characterisation of the components of the thioredoxin system in the archaeon Sulfolobus solfataricus
-
Grimaldi P., Ruocco M.R., Lanzotti M.A., Ruggiero A., Ruggiero I., Arcari P., Vitagliano L., and Masullo M. Characterisation of the components of the thioredoxin system in the archaeon Sulfolobus solfataricus. Extremophiles 12 (2008) 553-562
-
(2008)
Extremophiles
, vol.12
, pp. 553-562
-
-
Grimaldi, P.1
Ruocco, M.R.2
Lanzotti, M.A.3
Ruggiero, A.4
Ruggiero, I.5
Arcari, P.6
Vitagliano, L.7
Masullo, M.8
-
16
-
-
0030063350
-
Purification and characterization of NADH oxidase from the archaea Sulfolobus acidocaldarius and Sulfolobus solfataricus
-
Masullo M., Raimo G., Dello Russo A., Bocchini V., and Bannister J.V. Purification and characterization of NADH oxidase from the archaea Sulfolobus acidocaldarius and Sulfolobus solfataricus. Biotechnol. Appl. Biochem. 23 Pt 1 (1996) 47-54
-
(1996)
Biotechnol. Appl. Biochem.
, vol.23
, Issue.PART 1
, pp. 47-54
-
-
Masullo, M.1
Raimo, G.2
Dello Russo, A.3
Bocchini, V.4
Bannister, J.V.5
-
17
-
-
0034945083
-
The complete genome of the crenarchaeon Sulfolobus solfataricus P2
-
She Q., Singh R.K., Confalonieri F., Zivanovic Y., Allard G., Awayez M.J., Chan-Weiher C.C., Clausen I.G., Curtis B.A., De Moors A., Erauso G., Fletcher C., Gordon P.M., Heikamp-de Jong I., Jeffries A.C., Kozera C.J., Medina N., Peng X., Thi-Ngoc H.P., Redder P., Schenk M.E., Theriault C., Tolstrup N., Charlebois R.L., Doolittle W.F., Duguet M., Gaasterland T., Garrett R.A., Ragan M.A., Sensen C.W., and Van der Oost J. The complete genome of the crenarchaeon Sulfolobus solfataricus P2. Proc. Natl. Acad. Sci. U. S. A. 98 (2001) 7835-7840
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 7835-7840
-
-
She, Q.1
Singh, R.K.2
Confalonieri, F.3
Zivanovic, Y.4
Allard, G.5
Awayez, M.J.6
Chan-Weiher, C.C.7
Clausen, I.G.8
Curtis, B.A.9
De Moors, A.10
Erauso, G.11
Fletcher, C.12
Gordon, P.M.13
Heikamp-de Jong, I.14
Jeffries, A.C.15
Kozera, C.J.16
Medina, N.17
Peng, X.18
Thi-Ngoc, H.P.19
Redder, P.20
Schenk, M.E.21
Theriault, C.22
Tolstrup, N.23
Charlebois, R.L.24
Doolittle, W.F.25
Duguet, M.26
Gaasterland, T.27
Garrett, R.A.28
Ragan, M.A.29
Sensen, C.W.30
Van der Oost, J.31
more..
-
18
-
-
33751086147
-
Characterization of a multifunctional protein disulfide oxidoreductase from Sulfolobus solfataricus
-
Pedone E., Limauro D., D'Alterio R., Rossi M., and Bartolucci S. Characterization of a multifunctional protein disulfide oxidoreductase from Sulfolobus solfataricus. FEBS J. 273 (2006) 5407-5420
-
(2006)
FEBS J.
, vol.273
, pp. 5407-5420
-
-
Pedone, E.1
Limauro, D.2
D'Alterio, R.3
Rossi, M.4
Bartolucci, S.5
-
19
-
-
0039011740
-
A NAD(P)H oxidase isolated from the archaeon Sulfolobus solfataricus is not homologous with another NADH oxidase present in the same microorganism. Biochemical characterization of the enzyme and cloning of the encoding gene
-
Arcari P., Masullo L., Masullo M., Catanzano F., and Bocchini V. A NAD(P)H oxidase isolated from the archaeon Sulfolobus solfataricus is not homologous with another NADH oxidase present in the same microorganism. Biochemical characterization of the enzyme and cloning of the encoding gene. J. Biol. Chem. 275 (2000) 895-900
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 895-900
-
-
Arcari, P.1
Masullo, L.2
Masullo, M.3
Catanzano, F.4
Bocchini, V.5
-
20
-
-
12744261063
-
A 35 kDa NAD(P)H oxidase previously isolated from the archaeon Sulfolobus solfataricus is instead a thioredoxin reductase
-
Ruocco M.R., Ruggiero A., Masullo L., Arcari P., and Masullo M. A 35 kDa NAD(P)H oxidase previously isolated from the archaeon Sulfolobus solfataricus is instead a thioredoxin reductase. Biochimie 86 (2004) 883-892
-
(2004)
Biochimie
, vol.86
, pp. 883-892
-
-
Ruocco, M.R.1
Ruggiero, A.2
Masullo, L.3
Arcari, P.4
Masullo, M.5
-
21
-
-
33744486909
-
Crystallization and preliminary X-ray crystallographic analysis of Sulfolobus solfataricus thioredoxin reductase
-
Ruggiero A., Ruocco M.R., Grimaldi P., Arcari P., Masullo M., Zagari A., and Vitagliano L. Crystallization and preliminary X-ray crystallographic analysis of Sulfolobus solfataricus thioredoxin reductase. Acta Crystallogr. F61 (2005) 906-909
-
(2005)
Acta Crystallogr.
, vol.F61
, pp. 906-909
-
-
Ruggiero, A.1
Ruocco, M.R.2
Grimaldi, P.3
Arcari, P.4
Masullo, M.5
Zagari, A.6
Vitagliano, L.7
-
22
-
-
0347383761
-
SOLVE and RESOLVE: automated structure solution and density modification
-
Terwilliger T.C. SOLVE and RESOLVE: automated structure solution and density modification. Methods Enzymol. 374 (2003) 22-37
-
(2003)
Methods Enzymol.
, vol.374
, pp. 22-37
-
-
Terwilliger, T.C.1
-
23
-
-
0032872798
-
Density modification for macromolecular phase improvement
-
Cowtan K.D., and Zhang K.Y. Density modification for macromolecular phase improvement. Prog. Biophys. Mol. Biol. 72 (1999) 245-270
-
(1999)
Prog. Biophys. Mol. Biol.
, vol.72
, pp. 245-270
-
-
Cowtan, K.D.1
Zhang, K.Y.2
-
24
-
-
0032964481
-
Automated protein model building combined with iterative structure refinement
-
Perrakis A., Morris R., and Lamzin V.S. Automated protein model building combined with iterative structure refinement. Nat. Struct. Biol. 6 (1999) 458-463
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 458-463
-
-
Perrakis, A.1
Morris, R.2
Lamzin, V.S.3
-
25
-
-
37049014272
-
Version 1.2 of the crystallography and NMR system
-
Brunger A.T. Version 1.2 of the crystallography and NMR system. Nat. Protoc. 2 (2007) 2728-2733
-
(2007)
Nat. Protoc.
, vol.2
, pp. 2728-2733
-
-
Brunger, A.T.1
-
26
-
-
0344791680
-
Influence of internal dynamics on accuracy of protein NMR structures: derivation of realistic model distance data from a long molecular dynamics trajectory
-
Schneider T.R., Brunger A.T., and Nilges M. Influence of internal dynamics on accuracy of protein NMR structures: derivation of realistic model distance data from a long molecular dynamics trajectory. J. Mol. Biol. 285 (1999) 727-740
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 727-740
-
-
Schneider, T.R.1
Brunger, A.T.2
Nilges, M.3
-
27
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones T.A., Zou J.Y., Cowan S.W., and Kjeldgaard M. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. A47 (1991) 110-119
-
(1991)
Acta Crystallogr.
, vol.A47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
28
-
-
0028220312
-
Crystal structure of Escherichia coli thioredoxin reductase refined at 2 A resolution. Implications for a large conformational change during catalysis
-
Waksman G., Krishna T.S., Williams Jr. C.H., and Kuriyan J. Crystal structure of Escherichia coli thioredoxin reductase refined at 2 A resolution. Implications for a large conformational change during catalysis. J. Mol. Biol. 236 (1994) 800-816
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 800-816
-
-
Waksman, G.1
Krishna, T.S.2
Williams Jr., C.H.3
Kuriyan, J.4
-
29
-
-
33644845866
-
Conformational flexibility of Mycobacterium tuberculosis thioredoxin reductase: crystal structure and normal-mode analysis
-
Akif M., Suhre K., Verma C., and Mande S.C. Conformational flexibility of Mycobacterium tuberculosis thioredoxin reductase: crystal structure and normal-mode analysis. Acta Crystallogr. D61 (2005) 1603-1611
-
(2005)
Acta Crystallogr.
, vol.D61
, pp. 1603-1611
-
-
Akif, M.1
Suhre, K.2
Verma, C.3
Mande, S.C.4
-
30
-
-
0032725979
-
Crystal structure of reduced thioredoxin reductase from Escherichia coli: structural flexibility in the isoalloxazine ring of the flavin adenine dinucleotide cofactor
-
Lennon B.W., Williams Jr. C.H., and Ludwig M.L. Crystal structure of reduced thioredoxin reductase from Escherichia coli: structural flexibility in the isoalloxazine ring of the flavin adenine dinucleotide cofactor. Protein Sci. 8 (1999) 2366-2379
-
(1999)
Protein Sci.
, vol.8
, pp. 2366-2379
-
-
Lennon, B.W.1
Williams Jr., C.H.2
Ludwig, M.L.3
-
31
-
-
0034682854
-
Twists in catalysis: alternating conformations of Escherichia coli thioredoxin reductase
-
Lennon B.W., Williams Jr. C.H., and Ludwig M.L. Twists in catalysis: alternating conformations of Escherichia coli thioredoxin reductase. Science 289 (2000) 1190-1194
-
(2000)
Science
, vol.289
, pp. 1190-1194
-
-
Lennon, B.W.1
Williams Jr., C.H.2
Ludwig, M.L.3
-
32
-
-
0030596062
-
Crystal structure of Arabidopsis thaliana NADPH dependent thioredoxin reductase at 2.5 A resolution
-
Dai S., Saarinen M., Ramaswamy S., Meyer Y., Jacquot J.P., and Eklund H. Crystal structure of Arabidopsis thaliana NADPH dependent thioredoxin reductase at 2.5 A resolution. J. Mol. Biol. 264 (1996) 1044-1057
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 1044-1057
-
-
Dai, S.1
Saarinen, M.2
Ramaswamy, S.3
Meyer, Y.4
Jacquot, J.P.5
Eklund, H.6
-
33
-
-
34250836995
-
High-resolution structures of oxidized and reduced thioredoxin reductase from Helicobacter pylori
-
Gustafsson T.N., Sandalova T., Lu J., Holmgren A., and Schneider G. High-resolution structures of oxidized and reduced thioredoxin reductase from Helicobacter pylori. Acta Crystallogr. D63 (2007) 833-843
-
(2007)
Acta Crystallogr.
, vol.D63
, pp. 833-843
-
-
Gustafsson, T.N.1
Sandalova, T.2
Lu, J.3
Holmgren, A.4
Schneider, G.5
-
34
-
-
0034854206
-
Sequence-structure analysis of FAD-containing proteins
-
Dym O., and Eisenberg D. Sequence-structure analysis of FAD-containing proteins. Protein Sci. 10 (2001) 1712-1728
-
(2001)
Protein Sci.
, vol.10
, pp. 1712-1728
-
-
Dym, O.1
Eisenberg, D.2
-
35
-
-
0036168995
-
DICHROWEB: an interactive website for the analysis of protein secondary structure from circular dichroism spectra
-
Lobley A., Whitmore L., and Wallace B.A. DICHROWEB: an interactive website for the analysis of protein secondary structure from circular dichroism spectra. Bioinformatics 18 (2002) 211-212
-
(2002)
Bioinformatics
, vol.18
, pp. 211-212
-
-
Lobley, A.1
Whitmore, L.2
Wallace, B.A.3
-
36
-
-
0028820703
-
Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding
-
Myers J.K., Pace C.N., and Scholtz J.M. Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding. Protein Sci. 4 (1995) 2138-2148
-
(1995)
Protein Sci.
, vol.4
, pp. 2138-2148
-
-
Myers, J.K.1
Pace, C.N.2
Scholtz, J.M.3
-
37
-
-
24944449074
-
The genomics of disulfide bonding and protein stabilization in thermophiles
-
Beeby M., O'Connor B.D., Ryttersgaard C., Boutz D.R., Perry L.J., and Yeates T.O. The genomics of disulfide bonding and protein stabilization in thermophiles. PLoS Biol. 3 (2005) e309
-
(2005)
PLoS Biol.
, vol.3
-
-
Beeby, M.1
O'Connor, B.D.2
Ryttersgaard, C.3
Boutz, D.R.4
Perry, L.J.5
Yeates, T.O.6
-
38
-
-
40849126936
-
Stability against temperature of Sulfolobus solfataricus elongation factor 1 alpha, a multi-domain protein
-
Granata V., Graziano G., Ruggiero A., Raimo G., Masullo M., Arcari P., Vitagliano L., and Zagari A. Stability against temperature of Sulfolobus solfataricus elongation factor 1 alpha, a multi-domain protein. Biochim. Biophys. Acta 1784 (2008) 573-581
-
(2008)
Biochim. Biophys. Acta
, vol.1784
, pp. 573-581
-
-
Granata, V.1
Graziano, G.2
Ruggiero, A.3
Raimo, G.4
Masullo, M.5
Arcari, P.6
Vitagliano, L.7
Zagari, A.8
-
39
-
-
31044449507
-
Chemical denaturation of the elongation factor 1alpha isolated from the hyperthermophilic archaeon Sulfolobus solfataricus
-
Granata V., Graziano G., Ruggiero A., Raimo G., Masullo M., Arcari P., Vitagliano L., and Zagari A. Chemical denaturation of the elongation factor 1alpha isolated from the hyperthermophilic archaeon Sulfolobus solfataricus. Biochemistry 45 (2006) 719-726
-
(2006)
Biochemistry
, vol.45
, pp. 719-726
-
-
Granata, V.1
Graziano, G.2
Ruggiero, A.3
Raimo, G.4
Masullo, M.5
Arcari, P.6
Vitagliano, L.7
Zagari, A.8
-
40
-
-
0034693042
-
Structural and genomic correlates of hyperthermostability
-
Cambillau C., and Claverie J.M. Structural and genomic correlates of hyperthermostability. J. Biol. Chem. 275 (2000) 32383-32386
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 32383-32386
-
-
Cambillau, C.1
Claverie, J.M.2
-
41
-
-
1042298814
-
Mechanism of thermostabilization in a designed cold shock protein with optimized surface electrostatic interactions
-
Makhatadze G.I., Loladze V.V., Gribenko A.V., and Lopez M.M. Mechanism of thermostabilization in a designed cold shock protein with optimized surface electrostatic interactions. J. Mol. Biol. 336 (2004) 929-942
-
(2004)
J. Mol. Biol.
, vol.336
, pp. 929-942
-
-
Makhatadze, G.I.1
Loladze, V.V.2
Gribenko, A.V.3
Lopez, M.M.4
-
42
-
-
0037931826
-
Genomic correlates of hyperthermostability, an update
-
Suhre K., and Claverie J.M. Genomic correlates of hyperthermostability, an update. J. Biol. Chem. 278 (2003) 17198-17202
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 17198-17202
-
-
Suhre, K.1
Claverie, J.M.2
-
43
-
-
0035448574
-
Ion pairs and the thermotolerance of proteins from hyperthermophiles: a "traffic rule" for hot roads
-
Karshikoff A., and Ladenstein R. Ion pairs and the thermotolerance of proteins from hyperthermophiles: a "traffic rule" for hot roads. Trends Biochem. Sci. 26 (2001) 550-556
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 550-556
-
-
Karshikoff, A.1
Ladenstein, R.2
|