Avoidance of the cytochrome c biogenesis system by periplasmic CXXCH motifs

Biochemical Society Transactions

Volumn 36, Issue 6, 2008, Pages 1124-1128

  Mavridou, Despoina A I ^a   Braun, Martin ^b   Thöny Meyer, Linda ^b,c   Stevens, Julie M ^a   Ferguson, Stuart J ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

^b ETH ZURICH   (Switzerland)

^c Laboratory for Biomaterials   (Switzerland)

Author keywords

Cytochrome c; DsbD; Haem; Thioredoxin

Indexed keywords

CYTOCHROME C; HEME; OXIDOREDUCTASE; DIPZ PROTEIN, E COLI; DSBC PROTEIN, E COLI; ESCHERICHIA COLI PROTEIN; HYBRID PROTEIN; PROTEIN DISULFIDE ISOMERASE; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; BIOGENESIS; CARBOXY TERMINAL SEQUENCE; CATALYSIS; COVALENT BOND; CYTOPLASM; ESCHERICHIA COLI; IN VIVO STUDY; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN FOLDING; PROTEIN MODIFICATION; PROTEIN MOTIF; PROTEIN SYNTHESIS; BIOSYNTHESIS; CHEMISTRY; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; POLYACRYLAMIDE GEL ELECTROPHORESIS; ULTRAVIOLET SPECTROPHOTOMETRY;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

AMINO ACID MOTIFS; AMINO ACID SEQUENCE; CYTOCHROMES C; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; HEME; MOLECULAR SEQUENCE DATA; OXIDOREDUCTASES; PERIPLASM; PROTEIN DISULFIDE-ISOMERASES; RECOMBINANT FUSION PROTEINS; SPECTROPHOTOMETRY, ULTRAVIOLET;

EID: 59149089642     PISSN: 03005127     EISSN: 14708752     Source Type: Journal    
DOI: 10.1042/BST0361124     Document Type: Article

References (30)

1. Carvalho, A.P., Fernandes, P.A. and Ramos, M.J. (2006) Similarities and differences in the thioredoxin superfamily. Prog. Biophys. Mol. Biol. 91, 229-248
2. Bertini, I., Cavallaro, G. and Rosato, A. (2006) Cytochrome c: occurrence and functions. Chem. Rev. 106, 90-115
3. Allen, J.W., Daltrop, O., Stevens, J.M. and Ferguson, S.J. (2003) C-type cytochromes: diverse structures and biogenesis systems pose evolutionary problems. Philos. Trans. R. Soc. London Ser. B 358, 255-266
4. Stevens, J.M., Daltrop, O., Allen, J.W. and Ferguson, S.J. (2004) C-type cytochrome formation: chemical and biological enigmas. Acc. Chem. Res. 37, 999-1007
5. Hartshorne, R.S., Kern, M., Meyer, B., Clarke, T.A., Karas, M., Richardson, D.J. and Simon, J. (2007) A dedicated haem lyase is required for the maturation of a novel bacterial cytochrome c with unconventional covalent haem binding. Mol. Microbiol. 64, 1049-1060
6. Allen, J.W., Ginger, M.L. and Ferguson, S.J. (2004) Maturation of the unusual single-cysteine (XXXCH) mitochondrial c-type cytochromes found in trypanosomatids must occur through a novel biogenesis pathway. Biochem. J. 383, 537-542
7. Kuras, R., Saint-Marcoux, D., Wollman, F.A. and de Vitry, C. (2007) A specific c-type cytochrome maturation system is required for oxygenic photosynthesis. Proc. Natl. Acad. Sci. U.S.A. 104, 9906-9910
8. Hartshorne, S., Richardson, D.J. and Simon, J. (2006) Multiple haem lyase genes indicate substrate specificity in cytochrome c biogenesis. Biochem. Soc. Trans. 34, 146-149
9. Schlarb, B.G., Wagner, M.J., Vijgenboom, E., Ubbink, M., Bendall, D.S. and Howe, C.J. (1999) Expression of plastocyanin and cytochrome f of the cyanobacterium Phormidium laminosum in Escherichia coli and Paracoccus denitrificans and the role of leader peptides. Gene 234, 275-283
10. Braun, M. and Thöny-Meyer, L. (2004) Biosynthesis of artificial microperoxidases by exploiting the secretion and cytochrome c maturation apparatuses of Escherichia coli. Proc. Natl. Acad. Sci. U.S.A. 101, 12830-12835
11. Sanders, C. and Lill, H. (2000) Expression of prokaryotic and eukaryotic cytochromes c in Escherichia coli. Biochim. Biophys. Acta 1459, 131-138
12. Allen, J.W. and Ferguson, S.J. (2006) What is the substrate specificity of the System I cytochrome c biogenesis apparatus? Biochem. Soc. Trans. 34, 150-151
13. Dumont, M.E., Ernst, J.F., Hampsey, D.M. and Sherman, F. (1987) Identification and sequence of the gene encoding cytochrome c heme lyase in the yeast Saccharomyces cerevisiae. EMBO J. 6, 235-241
14. 1-heme lyase. Eur. J. Biochem. 207, 1093-1100
15. Gao, T. and O'Brian, M.R. (2007) Control of DegP-dependent degradation of c-type cytochromes by heme and the cytochrome c maturation system in Escherichia coli. J. Bacteriol. 189, 6253-6259
16. Mavridou, D.A., Stevens, J.M., Ferguson, S.J. and Redfield, C. (2007) Active-site properties of the oxidized and reduced C-terminal domain of DsbD obtained by NMR spectroscopy. J. Mol. Biol. 370, 643-658
17. Crooke, H. and Cole, J. (1995) The biogenesis of c-type cytochromes in Escherichia coli requires a membrane-bound protein, DipZ, with a protein disulphide isomerase-like domain. Mol. Microbiol. 15, 1139-1150
18. Missiakas, D., Schwager, F. and Raina, S. (1995) Identification and characterization of a new disulfide isomerase-like protein (DsbD) in Escherichia coli. EMBO J. 14, 3415-3424
19. Kim, J.H., Kim, S.J., Jeong, D.G., Son, J.H. and Ryu, S.E. (2003) Crystal structure of DsbDγ reveals the mechanism of redox potential shift and substrate specificity. FEBS Lett. 543, 164-169
20. Stirnimann, C.U., Rozhkova, A., Grauschopf, U., Bockmann, R.A., Glockshuber, R., Capitani, G. and Grutter, M.G. (2006) High-resolution structures of Escherichia coli cDsbD in different redox states: a combined crystallographic, biochemical and computational study. J. Mol. Biol. 358, 829-845
21. McCarthy, A.A., Haebel, P.W., Torronen, A., Rybin, V., Baker, E.N. and Metcalf, P. (2000) Crystal structure of the protein disulfide bond isomerase, DsbC, from Escherichia coli. Nat. Struct. Biol. 7, 196-199
22. 550 in Escherichia coli. Eur. J. Biochem. 235, 754-761
23. 3 oxidase in Escherichia coli. Biochem. Biophys. Res. Commun. 251, 744-747
24. Bartsch, R.G. (1971) Cytochromes: bacterial. Methods Enzymol. 23, 344-363
25. Goodhew, C.F., Brown, K.R. and Pettigrew, G.W. (1986) Haem staining in gels, a useful tool in the study of bacterial c-type cytochromes. Biochim. Biophys. Acta 852, 288-294
26. Thöny-Meyer, L., Fischer, F., Kunzler, P., Ritz, D. and Hennecke, H. (1995) Escherichia coli genes required for cytochrome c maturation. J. Bacteriol. 177, 4321-4326
27. Drabkin, D. (1942) Spectrophotometric studies. Structural interpretation of the spectra of cyanide, pyridine, and carbon monoxide derivatives of cytochrome c and hemoglobin. J. Biol. Chem. 146, 605-617
28. Huber, D., Cha, M.I., Debarbieux, L., Planson, A.G., Cruz, N., Lopez, G., Tasayco, M.L., Chaffotte, A. and Beckwith, J. (2005) A selection for mutants that interfere with folding of Escherichia coli thioredoxin-1 in vivo. Proc. Natl. Acad. Sci. U.S.A. 102, 18872-18877
29. Ishida, M., Dohmae, N., Shiro, Y., Oku, T., Iizuka, T. and Isogai, Y. (2004) Design and synthesis of de novo cytochromes c. Biochemistry 43, 9823-9833
30. 5 into cytochrome c-like protein. ChemBioChem 6, 1356-1359