Salinibacterium xinjiangense sp. nov., a psychrophilic bacterium isolated from the China No. 1 glacier

International Journal of Systematic and Evolutionary Microbiology

Volumn 58, Issue 12, 2008, Pages 2739-2742

  Zhang, De Chao ^a   Liu, Hong Can ^a   Xin, Yu Hua ^a   Yu, Yong ^b   Zhou, Pei Jin ^a   Zhou, Yu Guang ^a  

^a INSTITUTE OF MICROBIOLOGY   (China)

^b POLAR RESEARCH INSTITUTE OF CHINA   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL RNA; CATALASE; CYTOSINE; GENOMIC DNA; GUANINE; MENAQUINONE; RNA 16S;

AEROBIC BACTERIUM; ARTICLE; BACTERIAL GROWTH; BACTERIAL METABOLISM; BACTERIAL STRAIN; CHEMOTAXONOMY; CHINA; FATTY ACID ANALYSIS; GLACIER; GRAM POSITIVE BACTERIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; PROTEIN ISOLATION; PSYCHROPHILIC BACTERIUM; RNA SEQUENCE; SALINIBACTERIUM AMURSKYENSE; SALINIBACTERIUM XINJIANGENSE; SEQUENCE HOMOLOGY; TEMPERATURE SENSITIVITY; ACTINOMYCETALES; CLASSIFICATION; GENETICS; ICE COVER; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; PHYSIOLOGY; SPECIES DIFFERENCE;

BACTERIA (MICROORGANISMS); MICROBACTERIACEAE; POSIBACTERIA; SALINIBACTERIUM; SALINIBACTERIUM AMURSKYENSE;

ACTINOMYCETALES; CHINA; ICE COVER; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SPECIES SPECIFICITY;

EID: 58949104351     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65802-0     Document Type: Article

References (27)

1. An, S.-Y. & Yokota, A. (2007). The status of the species Leifsonia rubra Reddy et al. 2003. Request for an Opinion. Int J Syst Evol Microbiol 57, 1163.
2. Collins, M. D. & Bradbury, J. F. (1992). The genera Agromyces, Aureobacterium, Clavibacter, Curtobacterium, and Microbacterium. In The Prokaryotes, 2nd edn, pp. 1355-1368. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K. H. Schleifer. New York: Springer.
3. De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
4. Dong, X.-Z. & Cai, M.-Y. (2001). Manual for the Systematic Identification of General Bacteria, pp. 370-398. Beijing: Science Press (in Chinese).
5. Evtushenko, L. I., Dorofeeva, L. V., Subbotin, S. A., Cole, J. R. & Tiedje, J. M. (2000). Leifsonia poae gen. nov., sp. nov., isolated from nematode galls on Poa annua, and reclassification of 'Corynebacterium aquaticum' Leifson 1962 as Leifsonia aquatica (ex Leifson 1962) gen. nov., nom. rev., comb. nov. and Clavibacter xyli Davis et al. 1984 with two subspecies as Leifsonia xyli (Davis et al. 1984) gen. nov., comb. nov. Int J Syst Evol Microbiol 50, 371-380.
6. Evtushenko, L. I., Dorofeeva, L. V., Dobrovolskaya, T. G., Streshinskaya, G. M., Subbotin, S. A. & Tiedje, J. M. (2001). Agreia bicolorata gen. nov., sp. nov., to accommodate actinobacteria isolated from narrow reed grass infected by the nematode Heteroanguina graminophila. Int J Syst Evol Microbiol 51, 2073-2079.
7. Han, S. K., Nedashkovskaya, O. I., Mikhailov, V. V., Kim, S. B. & Bae, K. S. (2003). Salinibacterium amurskyense gen. nov., sp. nov., a novel genus of the family Microbacteriaceae from the marine environment. Int J Syst Evol Microbiol 53, 2061-2066.
8. Huß, V. A. R., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
9. Kämpfer, P., Rainey, F. A., Andersson, M. A., Nurmiaho Lassila, E.-L., Ulrych, U., Busse, H.-J., Weiss, N., Mikkola, R. & Salkinoja-Salonen, M. (2000). Frigoribacterium faeni gen. nov., sp. nov., a novel psychrophilic genus of the family Microbacteriaceae. Int J Syst Evol Microbiol 50, 355-363.
10. Kates, M. (1986). Techniques of Lipidology, 2nd edn. Amsterdam: Elsevier.
11. Komagata, K. & Suzuki, K. (1987). Lipid and cell wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
12. Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
13. Leifson, E. (1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183-1184.
14. Männistö, M. K., Schumann, P., Rainey, F. A., Kämpfer, P., Tsitko, I., Tiirola, M. A. & Salkinoja-Salonen, M. S. (2000). Subtercola boreus gen. nov., sp. nov. and Subtercola frigoramans sp. nov., two new psychrophilic actinobacteria isolated from boreal groundwater. Int J Syst Evol Microbiol 50, 1731-1739.
15. Margesin, R. & Schinner, F. (1994). Properties of cold-adapted microorganisms and their potential role in biotechnology. J Biotechnol 33, 1-14.
16. Park, Y.-H., Suzuki, K., Yim, D.-G., Lee, K. C., Kim, E., Yoon, J., Kim, S., Kho, Y. H., Goodfellow, M. & Komagata, K. (1993). Suprageneric classification of peptidoglycan group B actinomycetes by nucleotide sequencing of 5S ribosomal RNA. Antonie van Leeuwenhoek 64, 307-313.
17. Reddy, G. S. N., Prakash, J. S. S., Srinivas, R., Matsumoto, G. I. & Shivaji, S. (2003). Leifsonia rubra sp. nov. and Leifsonia aurea sp. nov., psychrophiles from a pond in Antarctica. Int J Syst Evol Microbiol 53, 977-984.
18. Sambrook, J., Frisch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
19. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. Technical Note 101. Newark, DE: MIDI.
20. Sheridan, P. P., Loveland-Curtze, J., Miteva, V. I. & Brenchley, J. E. (2003). Rhodoglobus vestalii gen. nov., sp. nov., a novel psychrophilic organism isolated from an Antarctic Dry Valley lake. Int J Syst Evol Microbiol 53, 985-994.
21. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-655. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
22. Stackebrandt, E., Rainey, F. A. & Ward-Rainey, N. L. (1997). Proposal for a new hierarchic classification system, Actinobacteria classis nov. Int J Syst Bacteriol 47, 479-491.
23. Suzuki, K., Sasaki, J., Uramoto, M., Nakase, T. & Komagata, K. (1997). Cryobacterium psychrophilum gen. nov., sp. nov., nom. rev., comb. nov., an obligately psychrophilic actinomycete to accommodate " Curtobacterium psychrophilum" Inoue and Komagata 1976. Int J Syst Bacteriol 47, 474-478.
24. Wu, C., Lu, X., Qin, M., Wang, Y. & Ruan, J. (1989). Analysis of menaquinone compound in microbial cells by HPLC. Microbiology [English translation of Microbiology (Beijing)] 16, 176-178.
25. Zhang, D.-C., Wang, H.-X., Liu, H.-C., Dong, X.-Z. & Zhou, P.-J. (2006). Flavobacterium glaciei sp. nov., a novel psychrophilic bacterium isolated from the China No. 1 glacier. Int J Syst Evol Microbiol 56, 2921-2925.
26. Zhang, D.-C., Wang, H.-X., Cui, H.-L., Yang, Y., Liu, H.-C., Dong, X.-Z. & Zhou, P.-J. (2007). Cryobacterium psychrotolerans sp. nov., a novel psychrotolerant bacterium isolated from the China No. 1 glacier. Int J Syst Evol Microbiol 57, 866-869.
27. Zhu, F., Wang, S. & Zhou, P. (2003). Flavobacterium xinjiangense sp. nov. and Flavobacterium omnivorum sp. nov., novel psychrophiles from the China No. 1 glacier. Int J Syst Evol Microbiol 53, 853-857.