메뉴 건너뛰기




Volumn 58, Issue 12, 2008, Pages 2930-2934

Microbacterium profundi sp. nov., isolated from deep-sea sediment of polymetallic nodule environments

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BIOCHEMICAL MARKER; DIAMINO ACID; FATTY ACID; GENOMIC DNA; ISOPRENOID QUINONE; METAL ION; ORNITHINE; QUINONE DERIVATIVE; RIBOSOME RNA; UNCLASSIFIED DRUG; METAL; RNA 16S;

EID: 58949101999     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.2008/000455-0     Document Type: Article
Times cited : (18)

References (30)
  • 1
    • 0034926894 scopus 로고    scopus 로고
    • Behrendt, U., Ulrich, A. & Schumann, P. (2001). Description of Microbacterium foliorum sp. nov. and Microbacterium phyllosphaerae sp. nov., isolated from the phyllosphere of grasses and the surface litter after mulching the sward, and reclassification of Aureobacterium resistens (Funke et al. 1998) as Microbacterium resistens comb. nov. Int J Syst Evol Microbiol 51, 1267-1276.
    • Behrendt, U., Ulrich, A. & Schumann, P. (2001). Description of Microbacterium foliorum sp. nov. and Microbacterium phyllosphaerae sp. nov., isolated from the phyllosphere of grasses and the surface litter after mulching the sward, and reclassification of Aureobacterium resistens (Funke et al. 1998) as Microbacterium resistens comb. nov. Int J Syst Evol Microbiol 51, 1267-1276.
  • 2
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun, J., Lee, J. H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2259-2261
    • Chun, J.1    Lee, J.H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.W.7
  • 3
    • 0014713693 scopus 로고
    • The quantitative measurement of DNA hybridization from renaturation rates
    • De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
    • (1970) Eur J Biochem , vol.12 , pp. 133-142
    • De Ley, J.1    Cattoir, H.2    Reynaerts, A.3
  • 4
    • 0040460179 scopus 로고    scopus 로고
    • List of Bacterial Names with Standing in Nomenclature: A folder available on the Internet
    • Euzéby, J. P. (1997). List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet. Int J Syst Bacteriol 47, 590-592. http://www.bacterio.cict.fr
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 590-592
    • Euzéby, J.P.1
  • 5
    • 53949094038 scopus 로고    scopus 로고
    • The family Microbacteriaceae
    • 3rd edn, Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer
    • Evtushenko, L. I. & Takeuchi, M. (2006). The family Microbacteriaceae. In The Prokaryotes: a Handbook on the Biology of Bacteria, 3rd edn, vol. 3, pp. 1020-1098. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
    • (2006) The Prokaryotes: A Handbook on the Biology of Bacteria , vol.3 , pp. 1020-1098
    • Evtushenko, L.I.1    Takeuchi, M.2
  • 6
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 7
    • 0020549589 scopus 로고
    • Studies on the spectrophotometric determination of DNA hybridization from renaturation rates
    • Huß, V. A. R., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
    • (1983) Syst Appl Microbiol , vol.4 , pp. 184-192
    • Huß, V.A.R.1    Festl, H.2    Schleifer, K.H.3
  • 8
    • 0019481137 scopus 로고
    • Cell wall composition of Micromonospora olivoasterospora, Micromonospora sagamiensis, and related organisms
    • Kawamoto, I., Oka, T. & Nara, T. (1981). Cell wall composition of Micromonospora olivoasterospora, Micromonospora sagamiensis, and related organisms. J Bacteriol 146, 527-534.
    • (1981) J Bacteriol , vol.146 , pp. 527-534
    • Kawamoto, I.1    Oka, T.2    Nara, T.3
  • 9
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 10
    • 77956800518 scopus 로고
    • Lipid and cell-wall analysis in bacterial systematics
    • Komagata, K. & Suzuki, K. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
    • (1987) Methods Microbiol , vol.19 , pp. 161-207
    • Komagata, K.1    Suzuki, K.2
  • 11
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 12
    • 0023752959 scopus 로고
    • Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum
    • Kuykendall, L. D., Roy, M. A., O'Neill, J. J. & Devine, T. E. (1988). Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum. Int J Syst Bacteriol 38, 358-361.
    • (1988) Int J Syst Bacteriol , vol.38 , pp. 358-361
    • Kuykendall, L.D.1    Roy, M.A.2    O'Neill, J.J.3    Devine, T.E.4
  • 13
    • 0037613668 scopus 로고    scopus 로고
    • Bacteremia due to a novel Microbacterium species in a patient with leukemia and description of Microbacterium paraoxydans sp. nov
    • Laffineur, K., Avesani, V., Cornu, G., Charlier, J., Janssens, M., Wauters, G. & Delmee, M. (2003). Bacteremia due to a novel Microbacterium species in a patient with leukemia and description of Microbacterium paraoxydans sp. nov. J Clin Microbiol 41, 2242-2246.
    • (2003) J Clin Microbiol , vol.41 , pp. 2242-2246
    • Laffineur, K.1    Avesani, V.2    Cornu, G.3    Charlier, J.4    Janssens, M.5    Wauters, G.6    Delmee, M.7
  • 14
    • 0000978501 scopus 로고
    • Determination of carbohydrate metabolism of marine bacteria
    • Leifson, E. (1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183-1184.
    • (1963) J Bacteriol , vol.85 , pp. 1183-1184
    • Leifson, E.1
  • 16
    • 19644397623 scopus 로고    scopus 로고
    • Alcanivorax dieselolei sp. nov., a novel alkane-degrading bacterium isolated from sea water and deep-sea sediment
    • Liu, C. & Shao, Z. (2005). Alcanivorax dieselolei sp. nov., a novel alkane-degrading bacterium isolated from sea water and deep-sea sediment. Int J Syst Evol Microbiol 55, 1181-1186.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1181-1186
    • Liu, C.1    Shao, Z.2
  • 18
    • 73649209034 scopus 로고
    • Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature
    • Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
    • (1962) J Mol Biol , vol.5 , pp. 109-118
    • Marmur, J.1    Doty, P.2
  • 19
    • 0036798823 scopus 로고    scopus 로고
    • A detailed phenotypic characterisation of the type strains of Halomonas species
    • Mata, J. A., Martinez-Canovas, J., Quesada, E. & Bejar, V. (2002). A detailed phenotypic characterisation of the type strains of Halomonas species. Syst Appl Microbiol 25, 360-375.
    • (2002) Syst Appl Microbiol , vol.25 , pp. 360-375
    • Mata, J.A.1    Martinez-Canovas, J.2    Quesada, E.3    Bejar, V.4
  • 20
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 21
    • 16844371599 scopus 로고    scopus 로고
    • Microbacterium oleivorans sp. nov. and Microbacterium hydrocarbonoxydans sp. nov., novel crude-oil-degrading Gram-positive bacteria
    • Schippers, A., Bosecker, K., Spröer, C. & Schumann, P. (2005). Microbacterium oleivorans sp. nov. and Microbacterium hydrocarbonoxydans sp. nov., novel crude-oil-degrading Gram-positive bacteria. Int J Syst Evol Microbiol 55, 655-660.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 655-660
    • Schippers, A.1    Bosecker, K.2    Spröer, C.3    Schumann, P.4
  • 22
    • 0032931274 scopus 로고    scopus 로고
    • Reclassification of Brevibacterium oxydans (Chatelain and Second 1966) as Microbacterium oxydans comb. nov
    • Schumann, P., Rainey, F. A., Burghardt, J., Stackebrandt, E. & Weiss, N. (1999). Reclassification of Brevibacterium oxydans (Chatelain and Second 1966) as Microbacterium oxydans comb. nov. Int J Syst Bacteriol 49, 175-177.
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 175-177
    • Schumann, P.1    Rainey, F.A.2    Burghardt, J.3    Stackebrandt, E.4    Weiss, N.5
  • 23
    • 34548168884 scopus 로고    scopus 로고
    • Microbacterium indicum sp. nov., isolated from a deep-sea sediment sample from the Chagos Trench, Indian Ocean
    • Shivaji, S., Bhadra, B., Rao, R. S., Chaturvedi, P., Pindi, P. K. & Raghukumar, C. (2007). Microbacterium indicum sp. nov., isolated from a deep-sea sediment sample from the Chagos Trench, Indian Ocean. Int J Syst Evol Microbiol 57, 1819-1822.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1819-1822
    • Shivaji, S.1    Bhadra, B.2    Rao, R.S.3    Chaturvedi, P.4    Pindi, P.K.5    Raghukumar, C.6
  • 24
    • 0031827673 scopus 로고    scopus 로고
    • Takeuchi, M. & Hatano, K. (1998a). Union of the genera Microbacterium Orla-Jensen and Aureobacterium Collins et al. in a redefined genus Microbacterium. Int J Syst Bacteriol 48, 739-747.
    • Takeuchi, M. & Hatano, K. (1998a). Union of the genera Microbacterium Orla-Jensen and Aureobacterium Collins et al. in a redefined genus Microbacterium. Int J Syst Bacteriol 48, 739-747.
  • 25
    • 0031875270 scopus 로고    scopus 로고
    • Proposal of six new species in the genus Microbacterium and transfer of Flavobacterium marinotypicum ZoBell and Upham to the genus Microbacterium as Microbacterium maritypicum comb. nov
    • Takeuchi, M. & Hatano, K. (1998b). Proposal of six new species in the genus Microbacterium and transfer of Flavobacterium marinotypicum ZoBell and Upham to the genus Microbacterium as Microbacterium maritypicum comb. nov. Int J Syst Bacteriol 48, 973-982.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 973-982
    • Takeuchi, M.1    Hatano, K.2
  • 26
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 27
    • 34547471478 scopus 로고    scopus 로고
    • Halomonas saccharevitans sp. nov., Halomonas arcis sp. nov. and Halomonas subterranea sp. nov., halophilic bacteria isolated from hypersaline environments of China
    • Xu, X.-W., Wu, Y.-H., Zhou, Z., Wang, C.-S., Zhou, Y.-G., Zhang, H.-B., Wang, Y. & Wu, M. (2007). Halomonas saccharevitans sp. nov., Halomonas arcis sp. nov. and Halomonas subterranea sp. nov., halophilic bacteria isolated from hypersaline environments of China. Int J Syst Evol Microbiol 57, 1619-1624.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1619-1624
    • Xu, X.-W.1    Wu, Y.-H.2    Zhou, Z.3    Wang, C.-S.4    Zhou, Y.-G.5    Zhang, H.-B.6    Wang, Y.7    Wu, M.8
  • 29
    • 0027170992 scopus 로고
    • Proposal of six new species in the genus Aureobacterium and transfer of Flavobacterium esteraromaticum Omelianski to the genus Aureobacterium as Aureobacterium esteraromaticum comb. nov
    • Yokota, A., Takeuchi, M., Sakane, T. & Weiss, N. (1993). Proposal of six new species in the genus Aureobacterium and transfer of Flavobacterium esteraromaticum Omelianski to the genus Aureobacterium as Aureobacterium esteraromaticum comb. nov. Int J Syst Bacteriol 43, 555-564.
    • (1993) Int J Syst Bacteriol , vol.43 , pp. 555-564
    • Yokota, A.1    Takeuchi, M.2    Sakane, T.3    Weiss, N.4
  • 30
    • 0002685935 scopus 로고
    • Studies on marine bacteria. I. The cultural requirements of heterotrophic aerobes
    • ZoBell, C. E. (1941). Studies on marine bacteria. I. The cultural requirements of heterotrophic aerobes. J Mar Res 4, 42-75.
    • (1941) J Mar Res , vol.4 , pp. 42-75
    • ZoBell, C.E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.