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Volumn 11, Issue 2, 2009, Pages 421-431

Linking microbial oxidation of arsenic with detection and phylogenetic analysis of arsenite oxidase genes in diverse geothermal environments

Author keywords

[No Author keywords available]

Indexed keywords

ARSENIC; ARSENITE OXIDASE; BACTERIAL DNA; BACTERIAL RNA; OXIDOREDUCTASE; PRIMER DNA; RIBOSOME DNA; RNA 16S;

EID: 58549083795     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/j.1462-2920.2008.01781.x     Document Type: Article
Times cited : (124)

References (40)
  • 2
    • 0842302335 scopus 로고    scopus 로고
    • Sulfurihydrogenibium azorense, sp. nov., a thermophilic hydrogen-oxidizing microaerophile from terrestrial hot springs in the Azores
    • Aguiar, P., Beveridge, T.J. Reysenbach, A.-L. (2004) Sulfurihydrogenibium azorense, sp. nov., a thermophilic hydrogen-oxidizing microaerophile from terrestrial hot springs in the Azores. Int J Syst Evol Microbiol 54 : 33 39.
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 33-39
    • Aguiar, P.1    Beveridge, T.J.2    Reysenbach, A.-L.3
  • 3
    • 0035093350 scopus 로고    scopus 로고
    • Energetics of overall metabolic reactions of thermophilic and hyperthermophilic Archaea and Bacteria
    • Amend, J.M. Shock, E.L. (2001) Energetics of overall metabolic reactions of thermophilic and hyperthermophilic Archaea and Bacteria. FEMS Microbiol Rev 25 : 175 243.
    • (2001) FEMS Microbiol Rev , vol.25 , pp. 175-243
    • Amend, J.M.1    Shock, E.L.2
  • 6
    • 35948998879 scopus 로고    scopus 로고
    • Autecology of an arsenite chemolithotroph: Sulfide constrains on function and distribution in a geothermal spring
    • D'Imperio, S., Lehr, C.R., Breary, M. McDermott, T.R. (2007) Autecology of an arsenite chemolithotroph: sulfide constrains on function and distribution in a geothermal spring. Appl Environ Microbiol 73 : 7067 7074.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 7067-7074
    • D'Imperio, S.1    Lehr, C.R.2    Breary, M.3    McDermott, T.R.4
  • 7
    • 1642348622 scopus 로고    scopus 로고
    • Arsenite-oxidizing Hydrogenobaculum strain isolated from an acid-sulfate-chloride geothermal spring in Yellowstone National Park
    • Donahoe-Christiansen, J., D'Imperio, S., Jackson, C.R., Inskeep, W.P. McDermott, T.R. (2004) Arsenite-oxidizing Hydrogenobaculum strain isolated from an acid-sulfate-chloride geothermal spring in Yellowstone National Park. Appl Environ Microbiol 70 : 1865 1868.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 1865-1868
    • Donahoe-Christiansen, J.1    D'Imperio, S.2    Jackson, C.R.3    Inskeep, W.P.4    McDermott, T.R.5
  • 8
    • 38149093947 scopus 로고    scopus 로고
    • Arsenite oxidation by a chemoautotrophic moderately acidophilic Thiomonas sp. from the strain isolation to the gene study
    • Duquesne, K., Lieutaud, A., Ratouchniak, J., Muller, D., Lett, M.-C. Bonnefoy, V. (2008) Arsenite oxidation by a chemoautotrophic moderately acidophilic Thiomonas sp. from the strain isolation to the gene study. Environ Microbiol 10 : 228 237.
    • (2008) Environ Microbiol , vol.10 , pp. 228-237
    • Duquesne, K.1    Lieutaud, A.2    Ratouchniak, J.3    Muller, D.4    Lett, M.-C.5    Bonnefoy, V.6
  • 9
    • 0000748612 scopus 로고
    • Rate of inorganic oxidation reactions involving dissolved oxygen
    • In. Melchior, D.C. Bassett, R.L. (eds). Washington, DC, USA: American Chemical Society, pp.
    • Eary, L.E. Schramke, J.A. (1990) Rate of inorganic oxidation reactions involving dissolved oxygen. In Chemical Modeling of Aqueous Systems II. Melchior, D.C. Bassett, R.L. (eds). Washington, DC, USA : American Chemical Society, pp. 379 396.
    • (1990) Chemical Modeling of Aqueous Systems II. , pp. 379-396
    • Eary, L.E.1    Schramke, J.A.2
  • 10
    • 0035095129 scopus 로고    scopus 로고
    • Crystal structure of the 100 kDa arsenite oxidase from Alcaligenes faecalis in two crystal forms at 1.64 angstrom and 2.03 angstrom
    • Ellis, P.J., Conrads, T., Hille, R. Kuhn, P. (2001) Crystal structure of the 100 kDa arsenite oxidase from Alcaligenes faecalis in two crystal forms at 1.64 angstrom and 2.03 angstrom. Structure 9 : 125 132.
    • (2001) Structure , vol.9 , pp. 125-132
    • Ellis, P.J.1    Conrads, T.2    Hille, R.3    Kuhn, P.4
  • 12
    • 0035856582 scopus 로고    scopus 로고
    • Arsenite oxidation and arsenate respiration by a new Thermus isolate
    • Gihring, T.M. Banfield, J.F. (2001) Arsenite oxidation and arsenate respiration by a new Thermus isolate. FEMS Microbiol Lett 204 : 335 340.
    • (2001) FEMS Microbiol Lett , vol.204 , pp. 335-340
    • Gihring, T.M.1    Banfield, J.F.2
  • 13
    • 0035477803 scopus 로고    scopus 로고
    • Rapid arsenite oxidation by Thermus aquaticus and Thermus thermophilus: Field and laboratory investigations
    • Gihring, T.M., Druschel, G.K., McCleskey, R.B., Hamers, R.J. Banfield, J.F. (2001) Rapid arsenite oxidation by Thermus aquaticus and Thermus thermophilus: field and laboratory investigations. Environ Sci Technol 35 : 3857 3862.
    • (2001) Environ Sci Technol , vol.35 , pp. 3857-3862
    • Gihring, T.M.1    Druschel, G.K.2    McCleskey, R.B.3    Hamers, R.J.4    Banfield, J.F.5
  • 14
    • 26844561468 scopus 로고    scopus 로고
    • Diversity and functional analysis of bacterial communities associated with natural hydrocarbon seeps in acidic soils at Rainbow Springs, Yellowstone National Park
    • Hamamura, N., Olson, S.H., Ward, D.M. Inskeep, W.P. (2005) Diversity and functional analysis of bacterial communities associated with natural hydrocarbon seeps in acidic soils at Rainbow Springs, Yellowstone National Park. Appl Environ Microbiol 71 : 5943 5950.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 5943-5950
    • Hamamura, N.1    Olson, S.H.2    Ward, D.M.3    Inskeep, W.P.4
  • 15
    • 33947186216 scopus 로고    scopus 로고
    • Alkalilimnicola ehrlichii sp. nov., a novel, arsenite-oxidizing haloalkaliphilic gammaproteobacterium capable of chemoautotrophic or heterotrophic growth with nitrate or oxygen as the electron acceptor
    • Hoeft, S.E., Blum, J.S., Stolz, J.F., Tabita, F.R., Witte, B., King, G.M., et al. (2007) Alkalilimnicola ehrlichii sp. nov., a novel, arsenite-oxidizing haloalkaliphilic gammaproteobacterium capable of chemoautotrophic or heterotrophic growth with nitrate or oxygen as the electron acceptor. Int J Syst Evol Microbiol 57 : 504 512.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 504-512
    • Hoeft, S.E.1    Blum, J.S.2    Stolz, J.F.3    Tabita, F.R.4    Witte, B.5    King, G.M.6
  • 16
    • 17644371340 scopus 로고    scopus 로고
    • Biomineralization of As(V)-hydrous ferric oxyhydroxide in microbial mats of an acid-sulfate-chloride geothermal spring, Yellowstone National park
    • Inskeep, W.P., Macur, R.E., Harrison, G., Bostick, B.C. Fendorf, S. (2004) Biomineralization of As(V)-hydrous ferric oxyhydroxide in microbial mats of an acid-sulfate-chloride geothermal spring, Yellowstone National park. Geochimica Cosmochimica Acta 68 : 3141 3155.
    • (2004) Geochimica Cosmochimica Acta , vol.68 , pp. 3141-3155
    • Inskeep, W.P.1    MacUr, R.E.2    Harrison, G.3    Bostick, B.C.4    Fendorf, S.5
  • 17
    • 33644822529 scopus 로고    scopus 로고
    • On the energetics of chemolithotrophy in nonequilibrium systems: Case studies of geothermal springs in Yellowstone National Park
    • Inskeep, W.P., Ackerman, G.G., Taylor, W.P., Kozubal, M., Korf, S. Macur, R.E. (2005) On the energetics of chemolithotrophy in nonequilibrium systems: case studies of geothermal springs in Yellowstone National Park. Geobiology 3 : 297 317.
    • (2005) Geobiology , vol.3 , pp. 297-317
    • Inskeep, W.P.1    Ackerman, G.G.2    Taylor, W.P.3    Kozubal, M.4    Korf, S.5    MacUr, R.E.6
  • 21
    • 39649108861 scopus 로고    scopus 로고
    • Isolation and distribution of a novel iron-oxidizing Crenarchaeon from acidic geothermal springs in Yellowstone National Park
    • Kozubal, M., Macur, R.E., Korf, S., Taylor, W.P., Ackerman, G.G., Nagy, A. Inskeep, W.P. (2008) Isolation and distribution of a novel iron-oxidizing Crenarchaeon from acidic geothermal springs in Yellowstone National Park. Appl Environ Microbiol 74 : 942 949.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 942-949
    • Kozubal, M.1    MacUr, R.E.2    Korf, S.3    Taylor, W.P.4    Ackerman, G.G.5    Nagy, A.6    Inskeep, W.P.7
  • 22
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • In. Stackebrandt, E. Goodfellow, M. (eds). New York, NY, USA: New York John Wiley & Sons, pp.
    • Lane, D.J. (1991) 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics. Stackebrandt, E. Goodfellow, M. (eds). New York, NY, USA : New York John Wiley & Sons, pp. 115 175.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics. , pp. 115-175
    • Lane, D.J.1
  • 23
    • 0035880591 scopus 로고    scopus 로고
    • Rapid oxidation of arsenite in a hot spring ecosystem, Yellowstone National Park
    • Langner, H.W., Jackson, C.R., McDermott, T.R. Inskeep, W.P. (2001) Rapid oxidation of arsenite in a hot spring ecosystem, Yellowstone National Park. Environ Sci Technol 35 : 3302 3309.
    • (2001) Environ Sci Technol , vol.35 , pp. 3302-3309
    • Langner, H.W.1    Jackson, C.R.2    McDermott, T.R.3    Inskeep, W.P.4
  • 25
    • 0348046330 scopus 로고    scopus 로고
    • Bacterial populations associated with the oxidation and reduction of arsenic in an unsaturated soil
    • Macur, R.E., Jackson, C.R., Botero, L.M., McDermott, T.R. Inskeep, W.P. (2004a) Bacterial populations associated with the oxidation and reduction of arsenic in an unsaturated soil. Environ Sci Technol 38 : 104 111.
    • (2004) Environ Sci Technol , vol.38 , pp. 104-111
    • MacUr, R.E.1    Jackson, C.R.2    Botero, L.M.3    McDermott, T.R.4    Inskeep, W.P.5
  • 26
    • 33644780303 scopus 로고    scopus 로고
    • Linking geochemical processes with microbial community analysis: Successional dynamics in an arsenic-rich, acid-sulfate-chloride geothermal spring
    • Macur, R.E., Langner, H.W., Kocar, B.D. Inskeep, W.P. (2004b) Linking geochemical processes with microbial community analysis: successional dynamics in an arsenic-rich, acid-sulfate-chloride geothermal spring. Geobiology 2 : 163 177.
    • (2004) Geobiology , vol.2 , pp. 163-177
    • MacUr, R.E.1    Langner, H.W.2    Kocar, B.D.3    Inskeep, W.P.4
  • 27
    • 0038336232 scopus 로고    scopus 로고
    • Bacterial formation of tooeleite and mixed arsenic(III) or arsenic(V)-iron(III) gels in the Carnoulès acid mine drainage, France. a XANES, XRD, and SEM study
    • Morin, G., Juillot, F., Casiot, C., Bruneel, O., Personn, J.C., Elbaz-Poulichet, F., et al. (2003) Bacterial formation of tooeleite and mixed arsenic(III) or arsenic(V)-iron(III) gels in the Carnoulès acid mine drainage, France. A XANES, XRD, and SEM study. Environ Sci Technol 37 : 1705 1712.
    • (2003) Environ Sci Technol , vol.37 , pp. 1705-1712
    • Morin, G.1    Juillot, F.2    Casiot, C.3    Bruneel, O.4    Personn, J.C.5    Elbaz-Poulichet, F.6
  • 28
    • 27844502481 scopus 로고    scopus 로고
    • Sulfurihydrogenibium yellowstonense sp. nov., an extremely thermophilic, facultatively heterotrophic, sulfur-oxidizing bacterium from Yellowstone National Park, and emended descriptions of the genus Sulfurihydrogenibium, Sulfurihydrogenibium subterraneum and Sulfurihydrogenibium azorense
    • Nakagawa, S., Shtaih, Z., Banta, A., Beveridge, T.J., Sako, Y. Reysenbach, A.-L. (2005) Sulfurihydrogenibium yellowstonense sp. nov., an extremely thermophilic, facultatively heterotrophic, sulfur-oxidizing bacterium from Yellowstone National Park, and emended descriptions of the genus Sulfurihydrogenibium, Sulfurihydrogenibium subterraneum and Sulfurihydrogenibium azorense. Int J Syst Evol Microbiol 55 : 2263 2268.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 2263-2268
    • Nakagawa, S.1    Shtaih, Z.2    Banta, A.3    Beveridge, T.J.4    Sako, Y.5    Reysenbach, A.-L.6
  • 29
    • 0036794790 scopus 로고    scopus 로고
    • Anaerobic oxidation of arsenite in Mono Lake water and by a facultative, arsenite-oxidizing chemoautotroph, strain MLHE-1
    • Oremland, R.S., Hoeft, S.E., Santini, J.M., Bano, N., Hollibaugh, R.A. Hollibaugh, J.T. (2002) Anaerobic oxidation of arsenite in Mono Lake water and by a facultative, arsenite-oxidizing chemoautotroph, strain MLHE-1. Appl Environ Microbiol 68 : 4795 4802.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 4795-4802
    • Oremland, R.S.1    Hoeft, S.E.2    Santini, J.M.3    Bano, N.4    Hollibaugh, R.A.5    Hollibaugh, J.T.6
  • 30
    • 0034013150 scopus 로고    scopus 로고
    • Microbial diversity at 83°C in Calcite Springs, Yellowstone National Park: Another environment where the Aquificales and 'Korarchaeota' coexist
    • Reysenbach, A.-L., Ehringer, M. Hershberger, K. (2000) Microbial diversity at 83°C in Calcite Springs, Yellowstone National Park: another environment where the Aquificales and 'Korarchaeota' coexist. Extremophiles 4 : 61 67.
    • (2000) Extremophiles , vol.4 , pp. 61-67
    • Reysenbach, A.-L.1    Ehringer, M.2    Hershberger, K.3
  • 31
  • 32
    • 33645450435 scopus 로고    scopus 로고
    • Anaerobic arsenite oxidation by novel denitrifying isolates
    • Rhine, D.E., Phelps, C.D. Young, L.Y. (2006) Anaerobic arsenite oxidation by novel denitrifying isolates. Environ Microbiol 8 : 899 908.
    • (2006) Environ Microbiol , vol.8 , pp. 899-908
    • Rhine, D.E.1    Phelps, C.D.2    Young, L.Y.3
  • 33
    • 33846587975 scopus 로고    scopus 로고
    • The arsenite oxidase genes (aroAB) in novel chemoautotrophic arsenite oxidizers
    • Rhine, D.E., Ni Cadhain, S.M., Zylstra, G.J. Young, L.Y. (2007) The arsenite oxidase genes (aroAB) in novel chemoautotrophic arsenite oxidizers. Biochem Biophys Res Comm 354 : 662 667.
    • (2007) Biochem Biophys Res Comm , vol.354 , pp. 662-667
    • Rhine, D.E.1    Ni Cadhain, S.M.2    Zylstra, G.J.3    Young, L.Y.4
  • 34
    • 0036184675 scopus 로고    scopus 로고
    • Oxidation of arsenite by Agrobacterium albertimagni, AOL15, sp. nov., isolated from Hot Creek, California
    • Salmassi, T.M., Venkateswaren, K., Satomi, M., Nealson, K.H., Newman, D.K. Hering, J.G. (2002) Oxidation of arsenite by Agrobacterium albertimagni, AOL15, sp. nov., isolated from Hot Creek, California. Geomicrobiol J 19 : 53 66.
    • (2002) Geomicrobiol J , vol.19 , pp. 53-66
    • Salmassi, T.M.1    Venkateswaren, K.2    Satomi, M.3    Nealson, K.H.4    Newman, D.K.5    Hering, J.G.6
  • 36
    • 1542347232 scopus 로고    scopus 로고
    • Molybdenum-containing arsenite oxidase of the chemolithoautotrophic arsenite oxidizer NT-26
    • Santini, J.M. Vanden Hoven, R.N. (2004) Molybdenum-containing arsenite oxidase of the chemolithoautotrophic arsenite oxidizer NT-26. J Bacteriol 186 : 1614 1619.
    • (2004) J Bacteriol , vol.186 , pp. 1614-1619
    • Santini, J.M.1    Vanden Hoven, R.N.2
  • 37
    • 0033987849 scopus 로고    scopus 로고
    • A new chemolithoautotrophic arsenite-oxidizing bacterium isolated from a gold mine: Phylogenetic, physiological, and preliminary biochemical studies
    • Santini, J.M., Sly, L.I., Schnagl, R.D. Macy, J.M. (2000) A new chemolithoautotrophic arsenite-oxidizing bacterium isolated from a gold mine: phylogenetic, physiological, and preliminary biochemical studies. Appl Environ Microbiol 66 : 92 97.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 92-97
    • Santini, J.M.1    Sly, L.I.2    Schnagl, R.D.3    MacY, J.M.4
  • 38
    • 0036187032 scopus 로고    scopus 로고
    • New arsenite-oxidizing bacteria isolated from Australian gold mining environments-phylogenetic relationships
    • Santini, J.M., Sly, L.I., Wen, A., Comrie, D., De Wulf-Durand, P. Macy, J.M. (2002) New arsenite-oxidizing bacteria isolated from Australian gold mining environments-phylogenetic relationships. Geomicrobiol J 19 : 67 76.
    • (2002) Geomicrobiol J , vol.19 , pp. 67-76
    • Santini, J.M.1    Sly, L.I.2    Wen, A.3    Comrie, D.4    De Wulf-Durand, P.5    MacY, J.M.6


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