Genetic diversity and gene flow in collapsed and healthy abalone fisheries

Molecular Ecology

Volumn 18, Issue 2, 2009, Pages 200-211

  Miller, K J ^a   Maynard, B T ^b   Mundy, C N ^b  

^a UNIVERSITY OF TASMANIA   (Australia)

^b UNIVERSITY OF TASMANIA   (Australia)

Author keywords

Connectivity; Conservation; Fisheries management; Larval dispersal; Microsatellite DNA; Self recruitment

Indexed keywords

MICROSATELLITE DNA;

ANIMAL; ARTICLE; AUSTRALIA; FOOD INDUSTRY; GASTROPOD; GENE FLOW; GENETIC VARIABILITY; GENETICS; GENOTYPE; POPULATION DYNAMICS; POPULATION GENETICS;

ANIMALS; FISHERIES; GASTROPODA; GENE FLOW; GENETIC VARIATION; GENETICS, POPULATION; GENOTYPE; MICROSATELLITE REPEATS; POPULATION DYNAMICS; TASMANIA;

HALIOTIDAE; HALIOTIS RUBRA;

EID: 58249134181     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2008.04019.x     Document Type: Article

References (49)

1. Allendorf FW, Luikart G (2007) Conservation and the Genetics of Populations. Blackwell Publishing, Malden, Massachusetts.
2. Babcock RC, Keesing J (1999) Fertilization biology of the abalone Haliotis laevigata: laboratory and field studies. Canadian Journal of Fisheries and Aquatic Science, 56, 1668 1678.
3. Baranski M, Loughnan S, Austin CM, Robinson N (2006a) A microsatellite linkage map of the blacklip abalone, Haliotis rubra. Animal Genetics, 37, 563 570.
4. Baranski M, Rourke M, Loughnan S et al 2006b) Isolation and characterization of 125 microsatellite DNA markers in the blacklip abalone, Haliotis rubra. Molecular Ecology Notes, 6, 740 746.
5. Bell JD, Rothlisberg PC, Munro JL, Loneregan NR, Nash WJ, Ward RD, Andrew NL, eds (2005) 'Restocking and Stock Enhancement of Marine Invertebrate Fisheries' Advances in Marine Biology, Elsevier, San Diego, CA.
6. Block BA, Teo SLH, Walli A et al 2005) Electronic tagging and population structure of Atlantic bluefin tuna. Nature, 434, 1121 1127.
7. Caddy JF, Seijo JC (2005) This is more difficult than we thought! The responsibility of scientists, managers and stakeholders to mitigate the unsustainability of marine fisheries. Philosophical Transactions of the Royal Society, Series B: Biological Sciences, 360, 59 75.
8. Davis TLO, Stanley CA (2002) Vertical and horizontal movements of southern bluefin tuna (Thunnus maccoyii) in the Great Australian Bight observed with ultrasonic telemetry. Fisheries Bulletin, 100, 448 465.
9. Elliott NG, Bartlett J, Evans B et al 2002) Application of Molecular Genetics to the Australian Abalone Fisheries: Forensic Protocols for Species Identification and Blacklip Stock Structure. CSIRO Marine Research, Canberra, ACT.
10. Evans B, White RWG, Elliott NG (2000) Characterisation of microsatellite loci in the Australian blacklip abalone (Haliotis rubra, Leach). Molecular Ecology, 9, 1171 1193.
11. Fogarty MJ, Sissenwine MP, Cohen EB (1991) Recruitment variability and the dynamics of exploited marine populations. Trends in Ecology and Evolution, 6, 241 246.
12. Gruenthal KM, Burton RS (2008) Genetic structure of natural populations of the California black abalone (Haliotis cracherodii Leach, 1814), a candidate for endangered species status. Journal of Experimental Marine Biology and Ecology, 355, 47 58.
13. Haddon M, Mundy C, Tarbath D (2008) Using an inverse-logistic model to describe growthe-increments of blacklip abalone (Haliotis rubra) in Tasmania. Fishery Bulletin, 106, 58 71.
14. Hauser L, Adcock GJ, Smith PJ et al 2002) Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper (Pagrus auratus). Proceedings of the National Academy of Science, USA, 99, 11742 11747.
15. Hedrick PW (2005) A standardized genetic differentiation measure. Evolution, 59, 1633 1638.
16. Hellberg ME, Burton RS, Neigel JE, Palumbi SR (2002) Genetic assessment of connectivity among marine populations. Bulletin of Marine Science, 70, 273 290.
17. Hilborn R, Branch TE, Ernst B et al 2003) State of the worlds fisheries. Annual Review of Environment and Resources, 28, 359 399.
18. Hutchings JA (2000) Collapse and recovery of marine fishes. Nature, 406, 882 885.
19. Jamieson GS (1999) Review of status of northern, or pinto, abalone, Haliotis kamtschatkana. Canada, Fisheries and Oceans Canada, Canadian Stock Assessment Secretariat, Report, 1999/190, 22.
20. Karpov KA, Haaker PL, Taniguchi IK, Rogers-Bennett L (2000) Serial depletion and collapse of the California (Haliotis spp.) fishery. In : Workshop on Rebuilding Abalone Stocks in British Columbia, Nanaimo, BC (ed. Campbell A pp. 11 24, Canadian Special Publication, Fisheries Aquatic Science.
21. Knowlton N, Jackson JBC (1993) Inbreeding and outbreeding in marine invertebrates. In : The Natural History of Inbreeding and Outbreeding (ed. Thornhill N pp. 200 249. University of Chicago Press, Chicago, IL.
22. Krug PJ (2001) Bet-hedging dispersal strategy of a specialist marine herbivore: a settlement dimorphism among sibling larvae of Alderia modesta. Marine Ecology Progress Series, 213, 177 192.
23. Le Quesne WJF, Hawkins SJ, Shepherd JG (2007) A comparison of no-take zones and traditional fishery management tools for managing site-attached species with a mixed larval pool. Fish and Fisheries, 8, 181 195.
24. Levitan DR, Sewell MA (1998) Fertilization success in free-spawning marine invertebrates: a review of the evidence and fisheries implications. In : 'North Pacific Symposium on Invertebrate Stock Assessment and Management' (eds Jamieson GS, Campbell A pp. 159 164. (Can. Spec. Publ. Fish. Aquat. Sci. 125)
25. McShane PE (1992) Early life history of abalone: a review. In : Abalone of the World: Biology, Fisheries and Culture (eds Shepherd SA, Tegner MJ, Guzman del Proo SA pp. 120 138. Blackwell Science, Oxford.
26. McShane PE, Black KP, Smith MG (1988) Recruitment processes in Haliotis rubra (Mollusca: Gastropoda) and regional hydrodynamics in southeastern Australia imply localised dispersal of larvae. Journal of Experimental Marine Biology and Ecology, 124, 175 203.
27. Meirmans PG (2006) Using the amova framework to estimate a standardized genetic differentiation measure. Evolution, 60, 2399 2402.
28. Micheli F, Shelton AO, Bushinsky SM et al 2008) Persistence of depleted abalones in marine reserves of central California. Biological Conservation, 141, 1078 1090.
29. Miner CM, Altstatt JM, Raimondi PT, Minchinton TE (2006) Recruitment failure and shifts in community structure following mass mortality limit recovery prospects of black abalone. Marine Ecology Progress Series, 327, 107 117.
30. Mundy CN, Karlov T, Haddon M (2006) Linking fishery-dependent and fishery-independent assessments of abalone fisheries. Final Report - Fisheries Research and Development Corporation, p. 271.
31. Paetkau D, Slade R, Burden M, Estoup A (2004) Direct real-time estimation of migration rate using assignment methods: a simulation based exploration of accuracy and power. Molecular Ecology, 13, 55 65.
32. Pasqualotto AC, Denning DW, Anderson MJ (2007) A cautionary tale: lack of consistency in allele sizes between two laboratories for a published multilocus microsatellite typing system. Journal of Clinical Microbiology, 45, 522 528.
33. Piry S, Alapetite A, Cornuet J-M et al 2004) GENECLASS2: a software for genetic assignment and first-generation migrant detection. Journal of Heredity, 95, 536 539.
34. Presson AP, Sobel E, Lange K, Papp JC (2006) Merging microsatellite data. Journal of Computational Biology, 13, 1131 1147.
35. Prince JD (1989) The fisheries biology of Tasmanian stocks of Haliotis rubra. PhD Thesis, University of Tasmania.
36. Prince JD (2003) The barefoot ecologist goes fishing. Fish and Fisheries, 4, 359 371.
37. Prince JD, Sellers TL, Ford WB, Talbot SR (1987) Experimental evidence for limited dispersal of Haliotid larvae (genus Haliotis: Mollusca: Gastropoda). Journal of Experimental Marine Biology and Ecology, 106, 243 263.
38. Prince JD, Sellers TL, Ford WB, Talbot SR (1988) Confirmation of a relationship between the localised abundance of breeding stock and recruitment for Haliotis rubra Leach (Mollusca: Gastropoda). Journal of Experimental Marine Biology and Ecology, 122, 91 104.
39. Raimondi PT, Keough MJ (1990) Behavioural variability in marine larvae. Australian Journal of Ecology, 15, 427 437.
40. Raymond M, Rousset F (1995) Genepop (version 1.2) : Population genetics software for exact tests and ecumenicism. Journal of Heredity, 86, 248 249.
41. Shepherd SA, Partington D (1995) Studies on southern Australian abalone (genus Haliotis) XVI. Recruitment, habitat and stock relations. Marine and Freshwater Research, 46, 669 680.
42. Slatkin M (1995) Hitchhiking and associative overdominance at a microsatellite locus. Molecular Biology and Evolution, 12, 473 480.
43. Stephens SA, Broekhuizen N, Macdiarmid AB et al 2006) Modelling transport of larval New Zealand abalone (Haliotis iris) along an open coast. Marine and Freshwater Research, 57, 519 532.
44. Swearer SE, Shima JS, Hellberg ME et al 2002) Evidence of self-recruitment in demersal marine populations. Bulletin of Marine Science, 70 (S1 251 271.
45. Tarbath DB, Haddon M, Mundy C (2001) ' East Coast Abalone Assessment: 2001.' Tasmanian Aquaculture and Fisheries Institute, Hobart.
46. Tarbath DB, Mundy C, Haddon M (2007) Tasmanian Abalone Fishery 2006. Fishery Assessment Report, Tasmanian Aquaculture and Fisheries Institute, Hobart.
47. Temby N, Miller K, Mundy C (2007) Evidence of genetic subdivision among populations of blacklip abalone (Haliotis rubra Leach) in Tasmania. Marine and Freshwater Research, 58, 1 10.
48. Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) Micro-Checker: software for identifying and correcting genotyping errors in microsatellite data. Molecular Ecology Notes, 4, 5353 5538.
49. Worm B, Barbier EB, Beaumont N et al 2006) Impacts of biodiversity loss on ocean ecosystem services. Science, 314, 787 790.