Spatial aggregation in Fusarium pseudograminearum populations from the Australian grain belt

Plant Pathology

Volumn 58, Issue 1, 2009, Pages 23-32

  Bentley, A R ^a,e   Milgroom, M G ^b   Leslie, J F ^c   Summerell, B A ^d   Burgess, L W ^a  

^a UNIVERSITY OF SYDNEY   (Australia)

^b Department of Obstetrics Gynecology   (United States)

^c KANSAS STATE UNIVERSITY   (United States)

^d ROYAL BOTANIC GARDENS AND DOMAIN TRUST   (Australia)

^e NATIONAL INSTITUTE OF AGRICULTURAL BOTANY   (United Kingdom)

Author keywords

Crown rot of cereals; Gibberella coronicola; Matrix comparison tests; Spatial autocorrelation; Triticum aestivum

Indexed keywords

FUNGAL DISEASE; FUNGUS; GENETIC STRUCTURE; GENETIC VARIATION; POPULATION ESTIMATION; POPULATION GENETICS; POPULATION STRUCTURE;

FUSARIUM; FUSARIUM PSEUDOGRAMINEARUM; GIBBERELLA; GIBBERELLA CORONICOLA; TRITICUM AESTIVUM;

EID: 58249117744     PISSN: 00320862     EISSN: 13653059     Source Type: Journal    
DOI: 10.1111/j.1365-3059.2008.01910.x     Document Type: Article

References (43)

1. Agapow PM, Burt A, 2001. Indices of multilocus linkage disequilibrium. Molecular Ecology Notes 1, 101 2.
2. Akinsanmi OA, Backhouse D, Simpfendorfer S, Chakraborty S, 2006. Genetic diversity of Australian Fusarium graminearum and F. pseudograminearum. Plant Pathology 55, 494 504.
3. Backhouse D, 2006. Forecasting the risk of crown rot between successive wheat crops. Australian Journal of Experimental Agriculture 46, 1499 506.
4. Bentley AR, Cromey MG, Farrokhi-Nejad R, Leslie JF, Summerell BA, Burgess LW, 2006. Fusarium crown and root rot pathogens associated with wheat and grass stem bases on the South Island of New Zealand. Australasian Plant Pathology 35, 495 502.
5. Bentley AR, Leslie JF, Liew ECY, Burgess LW, Summerell BA, 2008. Genetic structure of Fusarium pseudograminearum populations from the Australian grain belt. Phytopathology 98, 250 5.
6. Burgess LW, Backhouse D, Summerell BA et al., 1993. Long-term effects of stubble management on the incidence of infection of infection of wheat by Fusarium graminearum Schw. Group 1. Australian Journal of Experimental Agriculture 33, 451 6.
7. Burgess LW, Backhouse D, Summerell BA, Swan LJ, 2001. Crown rot of wheat. In : Summerell BA, Leslie JF, Backhouse D, Bryden WL, Burgess LW, eds. Fusarium: Paul E. Nelson Memorial Symposium. St Paul, MN, USA : APS Press, 271 94.
8. Chung MG, Epperson BK, 2000. Clonal and spatial genetic structure in Eurya emarginata (Theaceae). Heredity 84, 170 7.
9. Chung MY, Chun CP, Chung MG, 1999. Clonal and spatial genetic structure in a population of the endangered herb Lycoris sanguinea var. koreana (Amaryllidaceae). Genes and Genetic Systems 74, 61 6.
10. Conrad KF, 2001. Spatial Analysis by Distance IndicEs. SADIEShell; version 1.22. Harpenden, UK : IACR-Rothamsted.
11. Cortesi P, Fischer M, Milgroom MG, 2000. Identification and spread of Fomitiporia punctata associated with wood decay of grapevine showing symptoms of esca. Phytopathology 90, 967 72.
12. Cortesi P, Ottaviani M-P, Milgroom MG, 2004. Spatial and genetic analysis of a flag shoot subpopulation of Erysiphe necator in Italy. Phytopathology 94, 544 50.
13. Epperson BK, Huang Z, Li T-Q, 1999. Measures of spatial structure in samples of genotypes for multiallelic loci. Genetics Research 73, 251 61.
14. Excoffier L, Laval G, Schneider S, 2005. Arlequin ver. 3.0: An integrated software package for population genetic data analysis. Evolutionary Bioinformatics Online 1, 47 50.
15. Fisher NL, Burgess LW, Toussoun TA, Nelson PE, 1982. Carnation leaves as a substrate and for preserving cultures of Fusarium species. Phytopathology 72, 151 3.
16. Hungerford LL, 1991. Use of spatial statistics to identify and test significance in geographic disease patterns. Preventive Veterinary Medicine 11, 237 42.
17. Kerenyi Z, Moretti A, Waalwijk C, Olah B, Hornock L, 2004. Mating type sequences in asexually reproducing Fusarium species. Applied and Environmental Microbiology 70, 4419 23.
18. Leslie JF, Klein KK, 1996. Female fertility and mating type effects on effective population size and evolution in filamentous fungi. Genetics 144, 557 67.
19. Leslie JF, Summerell BA, 2006. The Fusarium Laboratory Manual. Ames, IA, USA : Blackwell Publishing Professional.
20. Linde DC, Zhan J, McDonald BA, 2002. Population structure of Mycosphaerella graminicola: from lesions to continents. Phytopathology 92, 946 55.
21. Madden LV, Hughes G, 1994. BBD - computer software for fitting the beta-binomial distribution to disease incidence data. Plant Disease 78, 536 40.
22. Milgroom MG, Lipari SE, 1995. Spatial analysis of nuclear and mitochondrial RFLP genotypes in populations of the chestnut blight fungus, Cryphonectria parasitica. Molecular Ecology 4, 633 42.
23. Milgroom MG, MacDonald WL, Double ML, 1991. Spatial pattern analysis of vegetative compatibility groups in the chestnut blight fungus, Cryphonectria parasitica. Canadian Journal of Botany 69, 1407 13.
24. Milgroom MG, Peever TL, 2003. Population biology of plant pathogens: the synthesis of plant disease epidemiology and population genetics. Plant Disease 87, 608 17.
25. Mishra PK, Tewari JP, Clear RM, Turkington TK, 2006. Genetic diversity and recombination within populations of Fusarium pseudograminearum from western Canada. International Microbiology 9, 65 8.
26. Monds RD, Cromey MG, Lauren DR, di Menna M, Marshall J, 2005. Fusarium graminearum, F. cortaderiae and F. pseudograminearum in New Zealand: molecular phylogenetic analysis, mycotoxin chemotypes and co-existence of species. Mycological Research 109, 410 20.
27. Munkvold GP, Duthie JA, Marois JJ, 1993. Spatial patterns of grapevines with Eutypa dieback in vineyards with or without perithecia. Phytopathology 83, 1440 8.
28. Nei M, 1973. Analysis of gene diversity in subdivided populations. Proceedings of the National Academy of Sciences, USA 70, 3321 3.
29. Nei M, 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89, 583 90.
30. Perry JN, 1995. Spatial analysis by distance indices. Journal of Animal Ecology 64, 303 14.
31. Perry JN, Bell ED, Smith RH, Woiwood IP, 1996. SADIE: Software to measure and model spatial pattern. Aspects of Applied Biology 46, 95 102.
32. Perry JN, Winder L, Holland JM, Alston RD, 1999. Red-blue plots for detecting clusters in count data. Ecology Letters 2, 106 13.
33. Pethybridge SJ, Madden LV, Griggs J, Wilson CR, 2004. Species composition and abundance of aphids in Australian hop gardens and their impact on spatiotemporal patterns of Carlavirus epidemics. Plant Pathology 53, 498 507.
34. Real LA McElhany P, 1996. Spatial pattern and process in plant-pathogen interactions. Ecology 77, 1011 25.
35. Sakai AK, Oden NL, 1983. Spatial pattern of sex expression in silver maple (Acer saccharinum L.): Morista's Index and spatial autocorrelation. The American Naturalist 122, 489 508.
36. Schmale DG, Shah DA, Bergstrom GC, 2005. Spatial patterns of viable spore deposition of Gibberella zeae in wheat fields. Phytopathology 95, 472 9.
37. Shah DA, Bergstrom GC, Ueng PP, 2001. Foci of Stagonospora nodorum blotch in winter wheat before canopy development. Phytopathology 91, 642 7.
38. Summerell BA, Burgess LW, Backhouse D, Bullock S, Swan LJ, 2001. Natural occurrence of perithecia of Gibberella coronicola on wheat plants with crown rot in Australia. Australasian Plant Pathology 30, 353 6.
39. Summerell BA, Burgess LW, Klein TA, 1989. The impact of stubble management on the incidence of crown rot of wheat. Australian Journal of Experimental Agriculture 29, 91 8.
40. Summerell BA, Burgess LW, Klein TA, Pattison AB, 1990. Stubble management and the site of penetration of wheat by Fusarium graminearum Group 1. Phytopathology 80, 877 9.
41. Vos P, Hogers R, Bleeker M et al., 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research 23, 4407 14.
42. Wilhelm KP, Jones RK, 2005. Meso- and microscale patterns of Fusarium head blight in spring wheat fields in Minnesota. Plant Disease 89, 474 9.
43. Zeller KA, Bowden RL, Leslie JF, 2003. Diversity of epidemic populations of Gibberella zeae from small quadrats in Kansas and North Dakota. Phytopathology 93, 874 80.